Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_736.g22252 Utricularia gibba HOM05D006321 ORTHO05D007929 1.6e-82 309.3 146 100.0
MSTRG.10445 Avicennia marina HOM05D006321 ORTHO05D007929 7.1e-67 257.3 138 85.5
Migut.L01889 Erythranthe guttata HOM05D006321 ORTHO05D007929 6.6e-65 250.8 143 79.0
PGSC0003DMG400028738 Solanum tuberosum HOM05D006321 ORTHO05D007929 1.3e-63 246.5 138 79.0
CAN.G279.32 Capsicum annuum HOM05D006321 ORTHO05D007929 1.6e-63 246.1 138 79.7
Prupe.1G076700 Prunus persica HOM05D006321 ORTHO05D007929 1.6e-63 246.1 137 77.4
CSS0046955 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 2.1e-63 245.7 144 77.8
FvH4_4g07380 Fragaria vesca HOM05D006321 ORTHO05D007929 2.1e-63 245.7 138 79.7
FAN12G2844 Fragaria x ananassa HOM05D006321 ORTHO05D007929 2.1e-63 245.7 138 79.7
FAN22G1279 Fragaria x ananassa HOM05D006321 ORTHO05D007929 2.1e-63 245.7 138 79.7
CSS0021189 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 2.8e-63 245.4 144 78.5
Solyc07g008910.3 Solanum lycopersicum HOM05D006321 ORTHO05D007929 3.6e-63 245.0 138 79.7
CAN.G547.21 Capsicum annuum HOM05D006321 ORTHO05D007929 4.8e-63 244.6 138 79.0
Ciclev10008911m.g Citrus clementina HOM05D006321 ORTHO05D007929 4.8e-63 244.6 138 79.7
Nitab4.5_0002365g0010 Nicotiana tabacum HOM05D006321 ORTHO05D007929 6.2e-63 244.2 138 77.5
RcHm_v2.0_Chr4g0399821 Rosa chinensis HOM05D006321 ORTHO05D007929 6.2e-63 244.2 138 79.0
Sc03g0007150 Simmondsia chinensis HOM05D006321 ORTHO05D007929 6.2e-63 244.2 138 79.0
CiPaw.08G033200 Carya illinoinensis HOM05D006321 ORTHO05D007929 8.1e-63 243.8 138 79.0
FAN07G2214 Fragaria x ananassa HOM05D006321 ORTHO05D007929 8.1e-63 243.8 137 79.6
TWI60G1509 Tripterygium wilfordii HOM05D006321 ORTHO05D007929 8.1e-63 243.8 138 80.4
Nitab4.5_0000366g0180 Nicotiana tabacum HOM05D006321 ORTHO05D007929 1.4e-62 243.0 138 78.3
Atru.chr7.791 Acer truncatum HOM05D006321 ORTHO05D007929 1.8e-62 242.7 138 78.3
CSS0019729 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 1.8e-62 242.7 144 77.8
Dinv25432 Davidia involucrata HOM05D006321 ORTHO05D007929 4.0e-62 241.5 138 78.3
Rhsim01G0118600 Rhododendron simsii HOM05D006321 ORTHO05D007929 4.0e-62 241.5 138 77.5
GSVIVG01010872001 Vitis vinifera HOM05D006321 ORTHO05D007929 6.9e-62 240.7 137 76.6
Aqoxy3G01064 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 9.0e-62 240.4 138 75.4
COL.COLO4_27457 Corchorus olitorius HOM05D006321 ORTHO05D007929 9.0e-62 240.4 138 78.3
MBI17_g07973_MAGBIO Magnolia biondii HOM05D006321 ORTHO05D007929 9.0e-62 240.4 137 75.9
Potri.018G143500 Populus trichocarpa HOM05D006321 ORTHO05D007929 1.2e-61 240.0 138 79.0
Cc06_g21570 Coffea canephora HOM05D006321 ORTHO05D007929 1.5e-61 239.6 136 78.7
Glyma.01G110600 Glycine max HOM05D006321 ORTHO05D007929 1.5e-61 239.6 138 76.8
SGA_v2.0_scaffold21G09650 Striga asiatica HOM05D006321 ORTHO05D007929 2.0e-61 239.2 142 77.5
COL.COLO4_07534 Corchorus olitorius HOM05D006321 ORTHO05D007929 2.6e-61 238.8 138 77.5
QL02p047686 Quercus lobata HOM05D006321 ORTHO05D007929 3.4e-61 238.4 136 77.2
TAR622G0244 Trochodendron aralioides HOM05D006321 ORTHO05D007929 5.8e-61 237.7 141 74.5
HPP92_002000 Vanilla planifolia HOM05D006321 ORTHO05D007929 7.6e-61 237.3 138 73.9
Sed0024765 Sechium edule HOM05D006321 ORTHO05D007929 9.9e-61 236.9 136 78.7
ECA240G2363 Erigeron canadensis HOM05D006321 ORTHO05D007929 1.3e-60 236.5 138 76.8
HanXRQChr16g0529271 Helianthus annuus HOM05D006321 ORTHO05D007929 1.7e-60 236.1 138 76.1
Lalb_Chr04g0263391 Lupinus albus HOM05D006321 ORTHO05D007929 1.7e-60 236.1 138 76.8
VMungo0540G0928 Vigna mungo HOM05D006321 ORTHO05D007929 1.7e-60 236.1 138 76.8
CsaV3_3G025050 Cucumis sativus L. HOM05D006321 ORTHO05D007929 2.9e-60 235.3 136 77.2
ECA234G0872 Erigeron canadensis HOM05D006321 ORTHO05D007929 2.9e-60 235.3 138 77.5
MD16G1249800 Malus domestica HOM05D006321 ORTHO05D007929 2.9e-60 235.3 138 76.1
Thecc.09G184700 Theobroma cacao HOM05D006321 ORTHO05D007929 2.9e-60 235.3 138 76.8
MELO3C012967.2 Cucumis melo HOM05D006321 ORTHO05D007929 3.8e-60 235.0 136 76.5
Glyma.03G076300 Glycine max HOM05D006321 ORTHO05D007929 3.8e-60 235.0 137 75.9
arahy.Tifrunner.gnm1.ann1.N3I1N2 Arachis hypogaea HOM05D006321 ORTHO05D007929 6.4e-60 234.2 136 76.5
EL10Ac5g11827 Beta vulgaris HOM05D006321 ORTHO05D007929 6.4e-60 234.2 137 77.4
Duzib251G0486 Durio zibethinus HOM05D006321 ORTHO05D007929 6.4e-60 234.2 139 76.3
Eucgr.C00122 Eucalyptus grandis HOM05D006321 ORTHO05D007929 6.4e-60 234.2 138 73.9
Gohir.A06G171500 Gossypium hirsutum HOM05D006321 ORTHO05D007929 6.4e-60 234.2 141 75.2
Gorai.010G210200 Gossypium raimondii HOM05D006321 ORTHO05D007929 6.4e-60 234.2 141 75.2
HanXRQChr03g0068421 Helianthus annuus HOM05D006321 ORTHO05D007929 6.4e-60 234.2 138 74.6
Os10g0162834 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 6.4e-60 234.2 137 77.4
arahy.Tifrunner.gnm1.ann1.CI6UTV Arachis hypogaea HOM05D006321 ORTHO05D007929 8.4e-60 233.8 136 76.5
Carub.0008s1773 Capsella rubella HOM05D006321 ORTHO05D007929 1.1e-59 233.4 138 73.9
AUR62030694 Chenopodium quinoa HOM05D006321 ORTHO05D007929 1.1e-59 233.4 137 75.9
AL8G33200 Arabidopsis lyrata HOM05D006321 ORTHO05D007929 1.4e-59 233.0 138 73.2
Lj6g0010246 Lotus japonicus HOM05D006321 ORTHO05D007929 1.4e-59 233.0 139 77.0
Os06g0482200 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 1.4e-59 233.0 137 76.6
BcaC04g19986 Brassica carinata HOM05D006321 ORTHO05D007929 1.9e-59 232.6 138 73.2
A10p14640 Brassica napus HOM05D006321 ORTHO05D007929 2.4e-59 232.3 138 72.5
BraA10t43551Z Brassica rapa HOM05D006321 ORTHO05D007929 2.4e-59 232.3 138 72.5
AUR62030699 Chenopodium quinoa HOM05D006321 ORTHO05D007929 2.4e-59 232.3 137 75.2
Thhalv10014893m.g Eutrema salsugineum HOM05D006321 ORTHO05D007929 2.4e-59 232.3 138 72.5
Gohir.D06G179600 Gossypium hirsutum HOM05D006321 ORTHO05D007929 2.4e-59 232.3 141 74.5
Lsat_1_v5_gn_7_55681 Lactuca sativa HOM05D006321 ORTHO05D007929 2.4e-59 232.3 138 78.3
Potri.006G076300 Populus trichocarpa HOM05D006321 ORTHO05D007929 2.4e-59 232.3 138 75.4
PGR142G1933 Punica granatum HOM05D006321 ORTHO05D007929 2.4e-59 232.3 138 77.5
PSO339G6079 Papaver somniferum HOM05D006321 ORTHO05D007929 3.2e-59 231.9 139 75.5
Sp6g18970 Schrenkiella parvula HOM05D006321 ORTHO05D007929 4.2e-59 231.5 138 72.5
AT5G57230 Arabidopsis thaliana HOM05D006321 ORTHO05D007929 5.4e-59 231.1 138 72.5
Phvul.006G013600 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 1.6e-58 229.6 138 74.6
BcaB08g36085 Brassica carinata HOM05D006321 ORTHO05D007929 2.1e-58 229.2 138 71.7
THA.LOC104817778 Tarenaya hassleriana HOM05D006321 ORTHO05D007929 2.1e-58 229.2 139 74.1
CARHR271020 Cardamine hirsuta HOM05D006321 ORTHO05D007929 3.5e-58 228.4 138 70.3
Ca_14974_v3 Cicer arietinum L. HOM05D006321 ORTHO05D007929 3.5e-58 228.4 138 73.2
CANSAT11G0316 Cannabis sativa HOM05D006321 ORTHO05D007929 4.6e-58 228.0 139 73.4
Medtr3g465100 Medicago truncatula HOM05D006321 ORTHO05D007929 4.6e-58 228.0 138 73.2
Aa31LG3G13120 Aethionema arabicum HOM05D006321 ORTHO05D007929 7.9e-58 227.3 138 71.0
PSO384G3851 Papaver somniferum HOM05D006321 ORTHO05D007929 7.9e-58 227.3 139 73.4
CDE06G2300 Ceratophyllum demersum HOM05D006321 ORTHO05D007929 1.3e-57 226.5 135 76.3
Manes.02G106300 Manihot esculenta HOM05D006321 ORTHO05D007929 1.3e-57 226.5 138 75.4
Phvul.003G138800 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 1.3e-57 226.5 138 73.2
Phvul.003G139178 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 1.3e-57 226.5 138 73.2
Zm00001eb161640 Zea mays HOM05D006321 ORTHO05D007929 1.3e-57 226.5 137 72.3
Psat2g182520 Pisum sativum HOM05D006321 ORTHO05D004512 2.3e-57 225.7 138 71.0
Psat4g027120 Pisum sativum HOM05D006321 ORTHO05D007929 2.3e-57 225.7 138 71.0
C09p49090 Brassica napus HOM05D006321 ORTHO05D007929 3.0e-57 225.3 146 69.2
BolC9t57758H Brassica oleracea HOM05D006321 ORTHO05D007929 3.0e-57 225.3 146 69.2
TPR.G32885 Trifolium pratense HOM05D006321 ORTHO05D007929 3.3e-56 221.9 138 71.0
Ah.12g059430 Amaranthus hybridus HOM05D006321 ORTHO05D007929 5.6e-56 221.1 142 73.2
SEGI_34333 Sequoiadendron giganteum HOM05D006321 ORTHO05D007929 8.1e-55 217.2 139 71.2
Hund14984 Selenicereus undatus HOM05D006321 ORTHO05D007929 4.0e-54 214.9 190 56.8
Migut.G01073 Erythranthe guttata HOM05D006321 ORTHO05D007929 1.3e-52 209.9 116 81.0
Actinidia01283 Actinidia chinensis HOM05D006321 ORTHO05D007929 8.4e-52 207.2 138 72.5
Cpa.g.sc95.16 Carica papaya HOM05D006321 ORTHO05D007929 3.2e-51 205.3 138 67.4
Mapoly0003s0233 Marchantia polymorpha HOM05D006321 ORTHO05D007929 3.5e-50 201.8 137 61.3
Nn2g12444 Nelumbo nucifera HOM05D006321 ORTHO05D007929 3.5e-50 201.8 119 73.1
Sopen07g004840 Solanum pennellii HOM05D003168 ORTHO05D003590 7.9e-50 200.7 117 76.1
Sabra18G0117000 Salix brachista HOM05D003168 ORTHO05D003525 1.3e-49 199.9 117 77.8
AUR62036340 Chenopodium quinoa HOM05D006321 ORTHO05D007929 2.3e-49 199.1 117 76.1
MD13G1243200 Malus domestica HOM05D006321 ORTHO05D007929 3.9e-49 198.4 120 71.7
Mapoly0003s0169 Marchantia polymorpha HOM05D006321 ORTHO05D007929 2.5e-48 195.7 137 59.9
Pp3c22_13020 Physcomitrium patens HOM05D006321 ORTHO05D007929 9.6e-48 193.7 134 61.9
Haze_22010 Corylus avellana HOM05D006321 ORTHO05D007929 1.4e-46 189.9 134 67.2
Psat5g235880 Pisum sativum HOM05D006321 ORTHO05D007929 2.4e-46 189.1 121 68.6
ATR1152G025 Amborella trichopoda HOM05D006321 ORTHO05D007929 1.6e-42 176.4 96 79.2
vmacro20823 Vaccinium macrocarpon HOM05D006321 ORTHO05D007929 7.9e-42 174.1 96 80.2
Peaxi162Scf00324g00017 Petunia axillaris HOM05D006321 ORTHO05D007929 3.0e-41 172.2 100 77.0
Lj6A87G16 Lonicera japonica HOM05D006321 ORTHO05D007929 6.7e-41 171.0 97 77.3
Oeu044678.1 Olea europaea HOM05D006321 ORTHO05D007929 6.7e-41 171.0 96 79.2
FAN17G2672 Fragaria x ananassa HOM05D006321 ORTHO05D007929 1.5e-40 169.9 143 59.4
Aqoxy108s003 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 7.4e-40 167.5 127 59.8
Oeu030095.1 Olea europaea HOM05D006321 ORTHO05D007929 1.3e-39 166.8 98 78.6
PSO541G2755 Papaver somniferum HOM05D006321 ORTHO05D007929 1.1e-38 163.7 96 74.0
Sabra06G0057200 Salix brachista HOM05D006321 ORTHO05D007929 2.0e-37 159.5 170 48.2
CBR_g19745 Chara braunii HOM05D006321 ORTHO05D007929 5.9e-37 157.9 132 55.3
DCAR_005801 Daucus carota HOM05D006321 ORTHO05D007929 2.8e-31 139.0 84 73.8
BcaB05g22329 Brassica carinata HOM05D006321 ORTHO05D007929 2.6e-29 132.5 140 50.7
TAR629G2308 Trochodendron aralioides HOM05D006321 ORTHO05D007929 3.2e-27 125.6 117 55.6
Lj6A100T20 Lonicera japonica HOM05D006321 ORTHO05D007929 4.4e-24 115.2 67 79.1
COL.COLO4_32845 Corchorus olitorius HOM05D006321 ORTHO05D007929 9.7e-24 114.0 67 79.1
Dinv41168 Davidia involucrata HOM05D000015 ORTHO05D003525 3.7e-23 112.1 68 76.5
Sopen00g012850 Solanum pennellii HOM05D006321 ORTHO05D007929 6.7e-17 91.3 57 64.9
BolC2t07570H Brassica oleracea HOM05D006321 ORTHO05D007929 2.9e-12 75.9 55 58.2


User provided reference genes

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