Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_736.g22244 Utricularia gibba HOM05D005960 ORTHO05D007537 6.4e-304 1046.6 520 100.0
Migut.H00653 Erythranthe guttata HOM05D005960 ORTHO05D007537 8.9e-197 690.6 457 77.2
MBI16_g15532_MAGBIO Magnolia biondii HOM05D005960 ORTHO05D007537 9.9e-196 687.2 455 76.7
TAR371G0518 Trochodendron aralioides HOM05D005960 ORTHO05D007537 1.3e-195 686.8 412 81.8
Rhsim10G0047200 Rhododendron simsii HOM05D005960 ORTHO05D007537 2.2e-195 686.0 428 78.7
ClCG11G004630 Citrullus lanatus HOM05D005960 ORTHO05D007537 2.9e-195 685.6 396 84.1
MELO3C022021.2 Cucumis melo HOM05D005960 ORTHO05D007537 8.4e-195 684.1 417 80.8
MD17G1056600 Malus domestica HOM05D005960 ORTHO05D007537 1.4e-194 683.3 418 80.6
Actinidia01975 Actinidia chinensis HOM05D005960 ORTHO05D007537 1.9e-194 682.9 387 85.8
Oeu000854.1 Olea europaea HOM05D005960 ORTHO05D007537 1.9e-194 682.9 480 75.0
Cpa.g.sc14.144 Carica papaya HOM05D005960 ORTHO05D007537 4.2e-194 681.8 458 74.9
QL02p039732 Quercus lobata HOM05D005960 ORTHO05D007537 4.2e-194 681.8 396 83.8
QL02p039477 Quercus lobata HOM05D005960 ORTHO05D007537 5.4e-194 681.4 388 85.3
Hma1.2p1_3044F.1_g332080 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 9.3e-194 680.6 387 85.0
CiPaw.04G058500 Carya illinoinensis HOM05D005960 ORTHO05D007537 1.6e-193 679.9 415 80.5
Rhsim10G0046600 Rhododendron simsii HOM05D005960 ORTHO05D007537 1.6e-193 679.9 401 82.3
Sed0006667 Sechium edule HOM05D005960 ORTHO05D007537 1.6e-193 679.9 396 83.3
HanXRQChr14g0448721 Helianthus annuus HOM05D005960 ORTHO05D007537 2.1e-193 679.5 462 74.9
CsaV3_5G038400 Cucumis sativus L. HOM05D005960 ORTHO05D007537 2.7e-193 679.1 425 79.5
Potri.017G090100 Populus trichocarpa HOM05D005960 ORTHO05D007537 2.7e-193 679.1 385 85.5
GSVIVG01011490001 Vitis vinifera HOM05D005960 ORTHO05D007537 2.7e-193 679.1 385 85.5
Cfa007624 Carpinus fangiana HOM05D005960 ORTHO05D007537 1.0e-192 677.2 459 74.7
vmacro05665 Vaccinium macrocarpon HOM05D005960 ORTHO05D007537 1.0e-192 677.2 385 85.2
FvH4_6g47510 Fragaria vesca HOM05D005960 ORTHO05D007537 1.3e-192 676.8 396 83.6
Eucgr.I01985 Eucalyptus grandis HOM05D005960 ORTHO05D007537 1.7e-192 676.4 461 75.1
PGR004G2687 Punica granatum HOM05D005960 ORTHO05D007537 1.7e-192 676.4 462 74.5
RcHm_v2.0_Chr2g0166541 Rosa chinensis HOM05D005960 ORTHO05D007537 1.7e-192 676.4 394 83.5
FAN05G2671 Fragaria x ananassa HOM05D005960 ORTHO05D007537 3.0e-192 675.6 396 83.3
Atru.chr8.386 Acer truncatum HOM05D005960 ORTHO05D007537 5.1e-192 674.9 464 74.6
CSS0005506 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 5.1e-192 674.9 387 84.5
CSS0003743 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 6.6e-192 674.5 387 84.5
Sopen03g016610 Solanum pennellii HOM05D005960 ORTHO05D007537 6.6e-192 674.5 385 84.9
CAN.G734.6 Capsicum annuum HOM05D005960 ORTHO05D007537 8.7e-192 674.1 454 75.1
Ca_04868_v3 Cicer arietinum L. HOM05D005960 ORTHO05D007537 8.7e-192 674.1 457 74.2
Solyc03g013240.4 Solanum lycopersicum HOM05D005960 ORTHO05D007537 1.5e-191 673.3 385 84.7
Thecc.04G090800 Theobroma cacao HOM05D005960 ORTHO05D007537 2.5e-191 672.5 470 73.6
Gohir.A11G071600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 3.3e-191 672.2 468 72.9
Gorai.007G081300 Gossypium raimondii HOM05D005960 ORTHO05D007537 7.3e-191 671.0 468 72.6
Manes.01G099100 Manihot esculenta HOM05D005960 ORTHO05D007537 7.3e-191 671.0 438 76.5
TWI60G0302 Tripterygium wilfordii HOM05D005960 ORTHO05D007537 7.3e-191 671.0 448 75.2
Aqoxy3G00406 Aquilegia oxysepala HOM05D005960 ORTHO05D007537 2.8e-190 669.1 461 74.0
ECA238G1943 Erigeron canadensis HOM05D005960 ORTHO05D007537 4.8e-190 668.3 462 74.5
THA.LOC104802965 Tarenaya hassleriana HOM05D005960 ORTHO05D007537 1.1e-189 667.2 385 84.4
Ciclev10011697m.g Citrus clementina HOM05D005960 ORTHO05D007537 1.4e-189 666.8 418 78.7
Glyma.19G027400 Glycine max HOM05D005960 ORTHO05D007537 1.4e-189 666.8 429 76.5
Phvul.004G033300 Phaseolus vulgaris HOM05D005960 ORTHO05D007537 1.8e-189 666.4 414 80.0
CANSAT64G2728 Cannabis sativa HOM05D005960 ORTHO05D007537 3.1e-189 665.6 387 83.2
AUR62042562 Chenopodium quinoa HOM05D005960 ORTHO05D007537 3.1e-189 665.6 451 74.1
COL.COLO4_21375 Corchorus olitorius HOM05D005960 ORTHO05D007537 9.0e-189 664.1 462 73.6
EL10Ac2g03055 Beta vulgaris HOM05D005960 ORTHO05D007537 3.4e-188 662.1 406 79.6
DCAR_005553 Daucus carota HOM05D005960 ORTHO05D007537 3.4e-188 662.1 434 77.0
Duzib147G1008 Durio zibethinus HOM05D005960 ORTHO05D007537 3.4e-188 662.1 466 73.4
Psat1g068640 Pisum sativum HOM05D005960 ORTHO05D007537 5.8e-188 661.4 463 73.9
TPR.G26197 Trifolium pratense HOM05D005960 ORTHO05D007537 3.8e-187 658.7 461 73.3
VMungo0464G0831 Vigna mungo HOM05D005960 ORTHO05D007537 3.8e-187 658.7 403 80.1
Glyma.13G059000 Glycine max HOM05D005960 ORTHO05D007537 4.9e-187 658.3 455 72.3
Sabra17G0079200 Salix brachista HOM05D005960 ORTHO05D007537 1.1e-186 657.1 401 80.8
Medtr6g013750 Medicago truncatula HOM05D005960 ORTHO05D007537 3.2e-186 655.6 456 73.2
arahy.Tifrunner.gnm1.ann1.8N3EDT Arachis hypogaea HOM05D005960 ORTHO05D007537 4.2e-186 655.2 387 82.9
Thhalv10020707m.g Eutrema salsugineum HOM05D005960 ORTHO05D007537 4.2e-186 655.2 406 79.3
Aa31LG5G12560 Aethionema arabicum HOM05D005960 ORTHO05D007537 5.4e-186 654.8 398 80.7
AL3G11200 Arabidopsis lyrata HOM05D005960 ORTHO05D007537 7.1e-186 654.4 385 82.6
AT3G01060 Arabidopsis thaliana HOM05D005960 ORTHO05D007537 7.1e-186 654.4 385 82.9
CARHR076010 Cardamine hirsuta HOM05D005960 ORTHO05D007537 9.3e-186 654.1 408 79.7
SalBow1G6551 Salvia bowleyana HOM05D005960 ORTHO05D007537 9.3e-186 654.1 400 82.5
arahy.Tifrunner.gnm1.ann1.7U9LX7 Arachis hypogaea HOM05D005960 ORTHO05D007537 1.2e-185 653.7 387 82.7
Lalb_Chr06g0175111 Lupinus albus HOM05D005960 ORTHO05D007537 2.7e-185 652.5 396 80.8
Sp3g01070 Schrenkiella parvula HOM05D005960 ORTHO05D007537 2.7e-185 652.5 462 72.7
Carub.0003s0111 Capsella rubella HOM05D005960 ORTHO05D007537 3.5e-185 652.1 384 82.6
Haze_14472 Corylus avellana HOM05D005960 ORTHO05D007537 3.5e-185 652.1 496 68.5
PSO013G0364 Papaver somniferum HOM05D005960 ORTHO05D007537 4.6e-185 651.7 460 71.5
Os05g0512200 Oryza sativa ssp. japonica HOM05D005960 ORTHO05D007537 1.7e-184 649.8 393 80.4
PSO421G0059 Papaver somniferum HOM05D005960 ORTHO05D007537 5.1e-184 648.3 455 71.4
BNapus_Darmor_BZH_scaffold_97p00050 Brassica napus HOM05D005960 ORTHO05D007537 1.1e-183 647.1 457 73.1
Lj2g0023614 Lotus japonicus HOM05D005960 ORTHO05D007537 1.9e-183 646.4 464 71.6
BolC1t05923H Brassica oleracea HOM05D005960 ORTHO05D007537 3.3e-183 645.6 457 72.6
BNapus_Darmor_BZH_scaffold_113p00110 Brassica napus HOM05D005960 ORTHO05D007537 5.6e-183 644.8 462 72.3
BraA01t04634Z Brassica rapa HOM05D005960 ORTHO05D007537 2.1e-182 642.9 462 72.1
Peaxi162Scf00451g00429 Petunia axillaris HOM05D005960 ORTHO05D007537 6.2e-182 641.3 451 74.3
Nn4g23343 Nelumbo nucifera HOM05D005960 ORTHO05D007537 3.1e-181 639.0 366 85.0
ATR0111G015 Amborella trichopoda HOM05D005960 ORTHO05D007537 2.2e-179 632.9 425 72.5
FAN02G1813 Fragaria x ananassa HOM05D005960 ORTHO05D007537 7.9e-177 624.4 361 84.8
Lsat_1_v5_gn_2_87860 Lactuca sativa HOM05D005960 ORTHO05D007537 1.8e-176 623.2 387 78.8
Nitab4.5_0001637g0110 Nicotiana tabacum HOM05D005960 ORTHO05D007537 2.4e-173 612.8 472 68.9
BcaC09g47681 Brassica carinata HOM05D005960 ORTHO05D007537 2.2e-171 606.3 457 69.4
Lj4C116G4 Lonicera japonica HOM05D005960 ORTHO05D007537 5.5e-170 601.7 410 74.4
SEGI_05647 Sequoiadendron giganteum HOM05D005960 ORTHO05D007537 9.3e-170 600.9 395 72.4
Sc10g0003290 Simmondsia chinensis HOM05D005960 ORTHO05D007537 6.0e-169 598.2 362 79.6
FAN14G4646 Fragaria x ananassa HOM05D005960 ORTHO05D007537 2.3e-168 596.3 396 75.3
Prupe.3G258900 Prunus persica HOM05D005960 ORTHO05D007537 3.3e-167 592.4 336 86.0
Dinv33810 Davidia involucrata HOM05D005960 ORTHO05D007537 2.6e-164 582.8 474 66.9
Gohir.D11G075600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 6.5e-163 578.2 336 83.6
Pp3c2_13280 Physcomitrium patens HOM05D005960 ORTHO05D007537 1.0e-160 570.9 443 63.7
Mapoly0015s0039 Marchantia polymorpha HOM05D005960 ORTHO05D007537 4.8e-158 562.0 447 62.0
SMO335G0027 Selaginella moellendorffii HOM05D005960 ORTHO05D007537 1.7e-155 553.5 384 71.1
AagrBONN_evm.TU.Sc2ySwM_362.2259 Anthoceros agrestis HOM05D005960 ORTHO05D007537 1.2e-148 530.8 390 65.6
Actinidia01967 Actinidia chinensis HOM05D005960 ORTHO05D007537 2.9e-147 526.2 389 71.2
Cc07_g03890 Coffea canephora HOM05D005960 ORTHO05D007537 7.2e-146 521.5 309 82.2
Nitab4.5_0005196g0010 Nicotiana tabacum HOM05D005960 ORTHO05D007537 1.6e-145 520.4 468 61.8
MSTRG.3021 Avicennia marina HOM05D005960 ORTHO05D007537 1.7e-142 510.4 278 88.8
AUR62018147 Chenopodium quinoa HOM05D005960 ORTHO05D007537 1.7e-142 510.4 362 71.3
Zm00001eb292620 Zea mays HOM05D005960 ORTHO05D007537 2.2e-142 510.0 310 80.6
CBR_g61504 Chara braunii HOM05D005960 ORTHO05D007537 1.4e-133 480.7 432 56.9
HPP92_018459 Vanilla planifolia HOM05D005960 ORTHO05D007537 2.4e-133 479.9 316 75.6
CDE07G2056 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 7.5e-119 431.8 303 71.6
Hma1.2p1_1813F.1_g303790 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 1.7e-118 430.6 241 85.1
Hma1.2p1_3044F.1_g332082 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 1.7e-118 430.6 241 85.1
CDE04G1831 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 9.2e-117 424.9 357 63.6
Dinv11487 Davidia involucrata HOM05D005960 ORTHO05D007537 9.2e-117 424.9 317 70.3
FAN09G3416 Fragaria x ananassa HOM05D005960 ORTHO05D007537 1.6e-116 424.1 424 55.4
TAR627G0454 Trochodendron aralioides HOM05D005960 ORTHO05D007537 3.8e-115 419.5 336 65.8
Cre13.g562750 Chlamydomonas reinhardtii HOM05D005960 ORTHO05D007537 1.8e-109 400.6 421 49.6
MD09G1061300 Malus domestica HOM05D005960 ORTHO05D007537 5.6e-90 335.9 242 72.3
MCO03G230 Micromonas commoda HOM05D005960 ORTHO05D007537 2.4e-69 267.3 321 43.9
MCO05G128 Micromonas commoda HOM05D005960 ORTHO05D007537 1.1e-58 231.9 324 41.7
PRCOL_00002980 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 8.7e-51 205.7 404 34.4
PRCOL_00004151 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 1.2e-47 195.3 385 34.5
CDE07G0145 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 5.5e-45 186.4 117 78.6
MCO08G069 Micromonas commoda HOM05D005960 ORTHO05D007537 1.0e-43 182.2 350 32.6
PRCOL_00003347 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 1.5e-42 178.3 331 32.3
Cc07_g03900 Coffea canephora HOM05D005960 ORTHO05D007537 1.3e-41 175.3 102 81.4
EL10Ac2g03064 Beta vulgaris HOM05D005960 ORTHO05D007537 1.3e-38 165.2 92 89.1
AUR62018149 Chenopodium quinoa HOM05D005960 ORTHO05D007537 3.8e-38 163.7 99 81.8
MCO08G121 Micromonas commoda HOM05D005960 ORTHO05D007537 3.6e-36 157.1 367 29.4
TPR.G22619 Trifolium pratense HOM05D005960 ORTHO05D007537 5.0e-30 136.7 104 66.3
Potri.004G125301 Populus trichocarpa HOM05D005960 ORTHO05D007537 4.2e-29 133.7 145 52.4
Oeu061493.1 Olea europaea HOM05D005960 ORTHO05D007537 1.5e-21 108.6 51 94.1
PGSC0003DMG400033541 Solanum tuberosum HOM05D005960 ORTHO05D007537 1.7e-14 85.1 62 74.2
unitig_899.g15156 Utricularia gibba HOM05D000595 ORTHO05D006275 1.2e-10 72.4 52 67.3
Zm00001eb030310 Zea mays HOM05D005960 ORTHO05D051632 2.4e-08 64.7 38 81.6
Zm00001eb250570 Zea mays HOM05D005960 ORTHO05D051632 5.4e-08 63.5 42 73.8
Oeu011022.1 Olea europaea HOM05D000595 ORTHO05D006275 1.3e-06 58.9 178 29.2


User provided reference genes

Program Settings