Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_699.g19954 Utricularia gibba HOM05D001945 ORTHO05D416610 3.6e-97 358.2 180 100.0
SGA_v2.0_scaffold87G27157 Striga asiatica HOM05D001945 ORTHO05D002048 1.6e-12 77.0 94 53.2
THA.LOC104825507 Tarenaya hassleriana HOM05D001945 ORTHO05D002048 2.8e-12 76.3 97 49.5
MSTRG.2460 Avicennia marina HOM05D001945 ORTHO05D002048 5.2e-11 72.0 91 50.5
Migut.E00017 Erythranthe guttata HOM05D001945 ORTHO05D002048 1.5e-10 70.5 89 50.6
SGA_v2.0_scaffold391G50632 Striga asiatica HOM05D001945 ORTHO05D002048 1.5e-10 70.5 95 45.3
FvH4_4g23760 Fragaria vesca HOM05D001945 ORTHO05D002048 2.0e-10 70.1 93 46.2
FAN07G0970 Fragaria x ananassa HOM05D001945 ORTHO05D002048 2.0e-10 70.1 93 46.2
FAN22G0872 Fragaria x ananassa HOM05D001945 ORTHO05D002048 2.0e-10 70.1 93 46.2
GSVIVG01010486001 Vitis vinifera HOM05D001945 ORTHO05D002048 2.0e-10 70.1 95 44.2
DCAR_026465 Daucus carota HOM05D001945 ORTHO05D002048 2.6e-10 69.7 81 48.1
RcHm_v2.0_Chr4g0430251 Rosa chinensis HOM05D001945 ORTHO05D002048 3.4e-10 69.3 92 45.7
EL10Ac6g13502 Beta vulgaris HOM05D001945 ORTHO05D002048 5.8e-10 68.6 68 57.4
FAN17G1837 Fragaria x ananassa HOM05D001945 ORTHO05D002048 5.8e-10 68.6 93 45.2
Duzib248G0049 Durio zibethinus HOM05D001945 ORTHO05D002048 7.5e-10 68.2 86 48.8
Duzib268G1458 Durio zibethinus HOM05D001945 ORTHO05D002048 9.8e-10 67.8 86 47.7
Gohir.D02G149100 Gossypium hirsutum HOM05D001945 ORTHO05D002048 1.7e-09 67.0 86 48.8
Gorai.005G167000 Gossypium raimondii HOM05D001945 ORTHO05D002048 1.7e-09 67.0 86 48.8
Oeu041664.1 Olea europaea HOM05D001945 ORTHO05D002048 2.2e-09 66.6 90 45.6
Hund25465 Selenicereus undatus HOM05D001945 ORTHO05D002048 2.2e-09 66.6 54 61.1
MSTRG.504 Avicennia marina HOM05D001945 ORTHO05D002048 2.9e-09 66.2 93 46.2
MSTRG.8003 Avicennia marina HOM05D001945 ORTHO05D002048 2.9e-09 66.2 91 51.6
Actinidia09651 Actinidia chinensis HOM05D001945 ORTHO05D002048 1.1e-08 64.3 86 46.5
Dinv17563 Davidia involucrata HOM05D001945 ORTHO05D002048 1.4e-08 63.9 87 44.8
SalBow8G4764 Salvia bowleyana HOM05D001945 ORTHO05D002048 1.4e-08 63.9 86 44.2
Actinidia20710 Actinidia chinensis HOM05D001945 ORTHO05D002048 1.9e-08 63.5 85 45.9
Ah.02g130910 Amaranthus hybridus HOM05D001945 ORTHO05D002048 1.9e-08 63.5 73 50.7
Ah.03g136150 Amaranthus hybridus HOM05D001945 ORTHO05D002048 1.9e-08 63.5 77 48.1
COL.COLO4_20402 Corchorus olitorius HOM05D001945 ORTHO05D002048 1.9e-08 63.5 88 45.5
CANSAT01G0790 Cannabis sativa HOM05D001945 ORTHO05D002048 2.4e-08 63.2 96 41.7
Gohir.A03G126100 Gossypium hirsutum HOM05D001945 ORTHO05D002048 2.4e-08 63.2 113 42.5
Potri.001G056800 Populus trichocarpa HOM05D001945 ORTHO05D002048 2.4e-08 63.2 102 42.2
Rhsim12G0099700 Rhododendron simsii HOM05D001945 ORTHO05D002048 2.4e-08 63.2 87 46.0
Gohir.A01G158300 Gossypium hirsutum HOM05D001945 ORTHO05D002048 3.2e-08 62.8 85 48.2
Gorai.002G183600 Gossypium raimondii HOM05D001945 ORTHO05D002048 3.2e-08 62.8 85 48.2
Hund06090 Selenicereus undatus HOM05D001945 ORTHO05D002048 3.2e-08 62.8 85 43.5
AUR62005620 Chenopodium quinoa HOM05D001945 ORTHO05D002048 5.4e-08 62.0 54 57.4
SalBow2G1525 Salvia bowleyana HOM05D001945 ORTHO05D002048 5.4e-08 62.0 86 47.7
Thecc.02G208700 Theobroma cacao HOM05D001945 ORTHO05D002048 5.4e-08 62.0 86 46.5
unitig_22.g6947 Utricularia gibba HOM05D001945 ORTHO05D002048 5.4e-08 62.0 85 48.2
MSTRG.13310 Avicennia marina HOM05D001945 ORTHO05D002048 7.0e-08 61.6 91 44.0
Gohir.A12G148700 Gossypium hirsutum HOM05D001945 ORTHO05D002048 7.0e-08 61.6 97 44.3
Gorai.008G165100 Gossypium raimondii HOM05D001945 ORTHO05D002048 7.0e-08 61.6 97 44.3
Psat5g095600 Pisum sativum HOM05D001945 ORTHO05D002048 7.0e-08 61.6 85 42.4
Sabra01G0041200 Salix brachista HOM05D001945 ORTHO05D002048 7.0e-08 61.6 56 57.1
unitig_26.g10398 Utricularia gibba HOM05D001945 ORTHO05D002048 7.0e-08 61.6 41 75.6
CiPaw.05G109800 Carya illinoinensis HOM05D001945 ORTHO05D002048 9.2e-08 61.2 98 44.9
AUR62024110 Chenopodium quinoa HOM05D001945 ORTHO05D002048 9.2e-08 61.2 54 59.3
Gohir.D01G147600 Gossypium hirsutum HOM05D001945 ORTHO05D002048 9.2e-08 61.2 85 47.1
arahy.Tifrunner.gnm1.ann1.JX210Q Arachis hypogaea HOM05D001945 ORTHO05D002048 1.2e-07 60.8 98 39.8
QL03p052748 Quercus lobata HOM05D001945 ORTHO05D002048 1.2e-07 60.8 91 45.1
Cfa009370 Carpinus fangiana HOM05D001945 ORTHO05D002048 1.6e-07 60.5 97 43.3
Medtr8g080640 Medicago truncatula HOM05D001945 ORTHO05D002048 1.6e-07 60.5 85 40.0
Oeu036870.1 Olea europaea HOM05D001945 ORTHO05D002048 1.6e-07 60.5 89 42.7
Sc11g0000460 Simmondsia chinensis HOM05D001945 ORTHO05D002048 1.6e-07 60.5 99 39.4
HanXRQChr12g0372451 Helianthus annuus HOM05D001945 ORTHO05D002048 2.0e-07 60.1 54 57.4
Potri.003G171400 Populus trichocarpa HOM05D001945 ORTHO05D002048 2.0e-07 60.1 99 40.4
Gohir.D12G152600 Gossypium hirsutum HOM05D001945 ORTHO05D002048 2.7e-07 59.7 97 43.3
Solyc05g015420.4 Solanum lycopersicum HOM05D001945 ORTHO05D002048 2.7e-07 59.7 89 49.4
Duzib251G0614 Durio zibethinus HOM05D001945 ORTHO05D002048 4.6e-07 58.9 86 45.3
Lsat_1_v5_gn_8_148441 Lactuca sativa HOM05D001945 ORTHO05D002048 4.6e-07 58.9 87 44.8
Nitab4.5_0000039g0010 Nicotiana tabacum HOM05D001945 ORTHO05D002048 4.6e-07 58.9 90 44.4
TWI18G0288 Tripterygium wilfordii HOM05D001945 ORTHO05D002048 4.6e-07 58.9 89 46.1
Dinv10956 Davidia involucrata HOM05D001945 ORTHO05D002048 6.0e-07 58.5 82 42.7
HanXRQChr17g0569031 Helianthus annuus HOM05D001945 ORTHO05D002048 6.0e-07 58.5 82 45.1
PGR102G0821 Punica granatum HOM05D001945 ORTHO05D002048 6.0e-07 58.5 95 45.3
vmacro16106 Vaccinium macrocarpon HOM05D001945 ORTHO05D002048 6.0e-07 58.5 37 75.7
arahy.Tifrunner.gnm1.ann1.XA5S0H Arachis hypogaea HOM05D001945 ORTHO05D002048 7.8e-07 58.2 96 39.6
Ciclev10031699m.g Citrus clementina HOM05D001945 ORTHO05D002048 7.8e-07 58.2 96 43.8
Migut.K00733 Erythranthe guttata HOM05D001945 ORTHO05D002048 7.8e-07 58.2 55 56.4
TWI36G0603 Tripterygium wilfordii HOM05D001945 ORTHO05D002048 7.8e-07 58.2 88 44.3
Haze_12419 Corylus avellana HOM05D001945 ORTHO05D002048 1.0e-06 57.8 97 42.3
HanXRQChr08g0207811 Helianthus annuus HOM05D001945 ORTHO05D002048 1.0e-06 57.8 88 47.7
Oeu006528.1 Olea europaea HOM05D001945 ORTHO05D002048 1.0e-06 57.8 67 52.2
Sabra03G0125500 Salix brachista HOM05D001945 ORTHO05D002048 1.0e-06 57.8 95 38.9
Atru.chr11.2324 Acer truncatum HOM05D001945 ORTHO05D002048 1.3e-06 57.4 96 43.8
CSS0013943 Camellia sinensis var. sinensis HOM05D001945 ORTHO05D002048 1.3e-06 57.4 81 44.4
Hma1.2p1_0065F.1_g035490 Hydrangea macrophylla HOM05D001945 ORTHO05D002048 1.3e-06 57.4 37 70.3
Cc11_g16900 Coffea canephora HOM05D001945 ORTHO05D002048 1.7e-06 57.0 40 62.5
Glyma.18G006600 Glycine max HOM05D001945 ORTHO05D002048 2.3e-06 56.6 56 55.4
Sopen05g010760 Solanum pennellii HOM05D001945 ORTHO05D002048 2.3e-06 56.6 89 48.3
TWI75G1443 Tripterygium wilfordii HOM05D001945 ORTHO05D002048 2.3e-06 56.6 89 43.8
BcaB05g24270 Brassica carinata HOM05D001945 ORTHO05D002048 3.0e-06 56.2 37 67.6
Cpa.g.sc43.57 Carica papaya HOM05D001945 ORTHO05D002048 3.0e-06 56.2 89 42.7
Eucgr.B03492 Eucalyptus grandis HOM05D001945 ORTHO05D002048 3.0e-06 56.2 98 38.8
Glyma.11G250600 Glycine max HOM05D001945 ORTHO05D002048 3.0e-06 56.2 58 55.2
Manes.12G011300 Manihot esculenta HOM05D001945 ORTHO05D002048 3.0e-06 56.2 101 41.6
PGR119G1917 Punica granatum HOM05D001945 ORTHO05D002048 3.0e-06 56.2 90 42.2
Hma1.2p1_0275F.1_g110760 Hydrangea macrophylla HOM05D001945 ORTHO05D002048 3.9e-06 55.8 87 44.8
MD16G1119400 Malus domestica HOM05D001945 ORTHO05D002048 3.9e-06 55.8 93 41.9
Nn3g16464 Nelumbo nucifera HOM05D001945 ORTHO05D002048 3.9e-06 55.8 34 70.6
Psat7g076920 Pisum sativum HOM05D001945 ORTHO05D002048 3.9e-06 55.8 88 38.6
THA.LOC104807898 Tarenaya hassleriana HOM05D001945 ORTHO05D002048 3.9e-06 55.8 69 49.3
MBI07_g31019_MAGBIO Magnolia biondii HOM05D001945 ORTHO05D002048 5.0e-06 55.5 90 40.0
Lj3A1068T45 Lonicera japonica HOM05D001945 ORTHO05D002048 8.6e-06 54.7 98 41.8


User provided reference genes

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