Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_699.g19915 Utricularia gibba HOM05D006399 ORTHO05D007988 1.5e-294 1015.4 488 100.0
Oeu005762.1 Olea europaea HOM05D006399 ORTHO05D007988 1.6e-155 553.5 456 60.1
CSS0033869 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 6.7e-154 548.1 449 60.6
Nitab4.5_0000145g0020 Nicotiana tabacum HOM05D006399 ORTHO05D007988 1.1e-153 547.4 458 59.0
Dinv34129 Davidia involucrata HOM05D006399 ORTHO05D007988 1.1e-151 540.8 439 59.9
Cc00_g16610 Coffea canephora HOM05D006399 ORTHO05D007988 1.8e-151 540.0 436 61.0
Thecc.02G341500 Theobroma cacao HOM05D006399 ORTHO05D007988 1.2e-150 537.3 455 57.6
Migut.L01261 Erythranthe guttata HOM05D006399 ORTHO05D007988 2.2e-149 533.1 469 59.1
Nitab4.5_0004661g0030 Nicotiana tabacum HOM05D006399 ORTHO05D007988 3.8e-149 532.3 376 66.2
Haze_11970 Corylus avellana HOM05D006399 ORTHO05D007988 2.5e-148 529.6 463 57.7
CAN.G1335.8 Capsicum annuum HOM05D006399 ORTHO05D007988 1.8e-146 523.5 434 60.4
Cfa008944 Carpinus fangiana HOM05D006399 ORTHO05D007988 3.0e-146 522.7 468 56.6
Atru.chr11.1740 Acer truncatum HOM05D006399 ORTHO05D007988 8.8e-146 521.2 458 57.0
DCAR_007171 Daucus carota HOM05D006399 ORTHO05D007988 8.8e-146 521.2 436 59.4
Gorai.013G088500 Gossypium raimondii HOM05D006399 ORTHO05D007988 8.8e-146 521.2 425 60.0
Actinidia17748 Actinidia chinensis HOM05D006399 ORTHO05D007988 1.5e-145 520.4 447 57.5
Potri.008G089800 Populus trichocarpa HOM05D006399 ORTHO05D007988 2.6e-145 519.6 461 56.8
Gohir.D13G077400 Gossypium hirsutum HOM05D006399 ORTHO05D007988 4.4e-145 518.8 453 57.4
Rhsim12G0079500 Rhododendron simsii HOM05D006399 ORTHO05D007988 1.3e-144 517.3 439 59.2
TAR622G1196 Trochodendron aralioides HOM05D006399 ORTHO05D007988 2.8e-144 516.2 434 59.0
Cpa.g.sc1.57 Carica papaya HOM05D006399 ORTHO05D007988 3.7e-144 515.8 486 56.0
Sabra08G0067200 Salix brachista HOM05D006399 ORTHO05D007988 1.4e-143 513.8 460 55.9
Manes.05G105200 Manihot esculenta HOM05D006399 ORTHO05D007988 1.8e-143 513.5 429 57.1
CANSAT64G0537 Cannabis sativa HOM05D006399 ORTHO05D007988 3.1e-143 512.7 427 58.5
HanXRQChr15g0476901 Helianthus annuus HOM05D006399 ORTHO05D007988 4.1e-143 512.3 446 56.1
CiPaw.05G130700 Carya illinoinensis HOM05D006399 ORTHO05D007988 9.1e-143 511.1 480 55.2
Actinidia31971 Actinidia chinensis HOM05D006399 ORTHO05D007988 1.2e-142 510.8 441 56.2
MD16G1068900 Malus domestica HOM05D006399 ORTHO05D007988 1.2e-142 510.8 372 62.4
FAN07G1460 Fragaria x ananassa HOM05D006399 ORTHO05D007988 4.5e-142 508.8 444 57.2
Duzib248G1019 Durio zibethinus HOM05D006399 ORTHO05D007988 1.0e-141 507.7 456 54.8
Lsat_1_v5_gn_3_51980 Lactuca sativa HOM05D006399 ORTHO05D007988 1.3e-141 507.3 447 56.8
PSO210G1214 Papaver somniferum HOM05D006399 ORTHO05D007988 6.5e-141 505.0 439 55.1
Lj2g0004295 Lotus japonicus HOM05D006399 ORTHO05D007988 8.5e-141 504.6 469 54.8
PGSC0003DMG400018440 Solanum tuberosum HOM05D006399 ORTHO05D007988 1.5e-140 503.8 457 55.4
Glyma.02G110300 Glycine max HOM05D006399 ORTHO05D007988 1.9e-140 503.4 468 54.3
RcHm_v2.0_Chr4g0439341 Rosa chinensis HOM05D006399 ORTHO05D007988 2.5e-140 503.1 454 55.9
FvH4_4g30980 Fragaria vesca HOM05D006399 ORTHO05D007988 1.2e-139 500.7 448 56.5
FAN12G0639 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.2e-139 500.7 443 56.9
Lj3C1034G10 Lonicera japonica HOM05D006399 ORTHO05D007988 1.6e-139 500.4 368 64.9
Lalb_Chr04g0255911 Lupinus albus HOM05D006399 ORTHO05D007988 2.7e-139 499.6 470 55.3
Prupe.1G278300 Prunus persica HOM05D006399 ORTHO05D007988 4.7e-139 498.8 459 54.0
Glyma.01G052300 Glycine max HOM05D006399 ORTHO05D007988 1.4e-138 497.3 376 60.1
Nn3g17286 Nelumbo nucifera HOM05D006399 ORTHO05D007988 1.8e-138 496.9 441 55.6
Nn3g17302 Nelumbo nucifera HOM05D006399 ORTHO05D007988 1.8e-138 496.9 441 55.6
Aqoxy3G00634 Aquilegia oxysepala HOM05D006399 ORTHO05D007988 4.0e-138 495.7 372 62.6
Peaxi162Scf00222g00816 Petunia axillaris HOM05D006399 ORTHO05D007988 2.0e-137 493.4 418 58.4
Eucgr.B03205 Eucalyptus grandis HOM05D006399 ORTHO05D007988 3.4e-137 492.7 445 55.5
Sopen05g003560 Solanum pennellii HOM05D006399 ORTHO05D007988 4.4e-137 492.3 456 55.0
Medtr5g042100 Medicago truncatula HOM05D006399 ORTHO05D007988 9.8e-137 491.1 370 60.5
Psat2g116280 Pisum sativum HOM05D006399 ORTHO05D007988 9.8e-137 491.1 370 61.6
Solyc05g007680.1 Solanum lycopersicum HOM05D006399 ORTHO05D007988 1.3e-136 490.7 430 56.7
Phvul.003G046500 Phaseolus vulgaris HOM05D006399 ORTHO05D007988 1.7e-136 490.3 480 50.2
Haze_11971 Corylus avellana HOM05D006399 ORTHO05D007988 2.2e-136 490.0 497 52.9
VMungo1215G0113 Vigna mungo HOM05D006399 ORTHO05D007988 4.8e-136 488.8 377 59.2
TPR.G34705 Trifolium pratense HOM05D006399 ORTHO05D007988 3.1e-135 486.1 483 51.3
Cfa008945 Carpinus fangiana HOM05D006399 ORTHO05D007988 7.0e-135 485.0 435 56.3
GSVIVG01005154001 Vitis vinifera HOM05D006399 ORTHO05D007988 1.2e-134 484.2 420 56.4
PGR102G0590 Punica granatum HOM05D006399 ORTHO05D007988 2.0e-134 483.4 377 59.7
Ca_04827_v3 Cicer arietinum L. HOM05D006399 ORTHO05D007988 7.7e-134 481.5 373 59.0
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 1.7e-133 480.3 390 58.2
Eucgr.G02484 Eucalyptus grandis HOM05D006399 ORTHO05D007988 1.7e-133 480.3 460 52.8
CSS0044828 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 1.9e-132 476.9 426 56.3
QL12p039367 Quercus lobata HOM05D006399 ORTHO05D007988 4.2e-132 475.7 432 55.8
QL93p1999_0143 Quercus lobata HOM05D006399 ORTHO05D007988 5.5e-132 475.3 434 55.8
QL03p069077 Quercus lobata HOM05D006399 ORTHO05D007988 9.5e-132 474.6 434 55.8
THA.LOC104808694 Tarenaya hassleriana HOM05D006399 ORTHO05D007988 2.7e-131 473.0 453 55.2
FAN07G2088 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.4e-130 470.7 418 57.2
BraA09t39516Z Brassica rapa HOM05D006399 ORTHO05D007988 3.0e-130 469.5 414 57.0
AT1G26761 Arabidopsis thaliana HOM05D006399 ORTHO05D007988 6.8e-130 468.4 416 57.2
A09p40180 Brassica napus HOM05D006399 ORTHO05D007988 8.8e-130 468.0 409 56.7
RcHm_v2.0_Chr4g0439361 Rosa chinensis HOM05D006399 ORTHO05D007988 1.2e-129 467.6 420 56.7
Carub.0001s2425 Capsella rubella HOM05D006399 ORTHO05D007988 1.5e-129 467.2 412 56.1
Thhalv10007591m.g Eutrema salsugineum HOM05D006399 ORTHO05D007988 1.5e-129 467.2 405 56.8
PGR102G2002 Punica granatum HOM05D006399 ORTHO05D007988 4.4e-129 465.7 446 54.5
BcaC05g26389 Brassica carinata HOM05D006399 ORTHO05D007988 5.7e-129 465.3 407 56.3
C05p24200 Brassica napus HOM05D006399 ORTHO05D007988 5.7e-129 465.3 407 56.3
BolC5t31156H Brassica oleracea HOM05D006399 ORTHO05D007988 5.7e-129 465.3 407 56.3
FAN22G0994 Fragaria x ananassa HOM05D006399 ORTHO05D007988 5.7e-129 465.3 418 56.5
AL1G38940 Arabidopsis lyrata HOM05D006399 ORTHO05D007988 7.5e-129 464.9 410 56.8
Dinv07949 Davidia involucrata HOM05D006399 ORTHO05D007988 2.2e-128 463.4 437 53.8
FvH4_4g30990 Fragaria vesca HOM05D006399 ORTHO05D007988 6.3e-128 461.8 418 56.2
Dinv34130 Davidia involucrata HOM05D006399 ORTHO05D007988 1.4e-127 460.7 433 53.3
CiPaw.06G087600 Carya illinoinensis HOM05D006399 ORTHO05D007988 1.8e-127 460.3 430 53.5
Sp1g22040 Schrenkiella parvula HOM05D006399 ORTHO05D007988 2.4e-127 459.9 398 56.3
QL12p039232 Quercus lobata HOM05D006399 ORTHO05D007988 4.1e-127 459.1 443 52.8
FAN12G2051 Fragaria x ananassa HOM05D006399 ORTHO05D007988 7.0e-127 458.4 418 56.0
CDE06G2322 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 1.7e-125 453.8 352 60.8
EL10Ac6g13248 Beta vulgaris HOM05D006399 ORTHO05D007988 5.0e-125 452.2 445 51.5
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 1.2e-123 447.6 428 51.9
Manes.01G033900 Manihot esculenta HOM05D006399 ORTHO05D007988 3.6e-123 446.0 427 52.9
Aa31LG7G8360 Aethionema arabicum HOM05D006399 ORTHO05D007988 6.1e-123 445.3 397 55.9
SEGI_38638 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 2.0e-121 440.3 368 54.9
Ah.02g129470 Amaranthus hybridus HOM05D006399 ORTHO05D007988 2.6e-121 439.9 395 52.4
Atru.chr11.1742 Acer truncatum HOM05D006399 ORTHO05D007988 1.3e-120 437.6 443 52.1
ATR0564G327 Amborella trichopoda HOM05D006399 ORTHO05D007988 8.3e-120 434.9 379 56.2
CARHR025180 Cardamine hirsuta HOM05D006399 ORTHO05D007988 5.0e-117 425.6 404 54.7
GSVIVG01005153001 Vitis vinifera HOM05D006399 ORTHO05D007988 6.2e-115 418.7 465 47.5
CiPaw.05G130800 Carya illinoinensis HOM05D006399 ORTHO05D007988 2.5e-108 396.7 422 49.3
Pp3c5_14870 Physcomitrium patens HOM05D006399 ORTHO05D007988 3.2e-103 379.8 367 51.2
MSTRG.719 Avicennia marina HOM05D006399 ORTHO05D007988 1.2e-97 361.3 313 60.4
FAN22G2397 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.9e-84 317.4 431 42.9
SalBow2G2517 Salvia bowleyana HOM05D006399 ORTHO05D007988 2.4e-82 310.5 210 68.1
Os08g0433300 Oryza sativa ssp. japonica HOM05D006399 ORTHO05D007988 1.5e-81 307.8 355 46.8
AUR62032821 Chenopodium quinoa HOM05D006399 ORTHO05D007988 5.6e-76 289.3 254 55.5
Zm00001eb041520 Zea mays HOM05D006399 ORTHO05D007988 1.5e-73 281.2 350 43.7
MBI05_g36409_MAGBIO Magnolia biondii HOM05D006399 ORTHO05D007988 3.4e-73 280.0 214 61.7
Cre06.g273050 Chlamydomonas reinhardtii HOM05D006399 ORTHO05D007988 3.3e-68 263.5 400 39.2
Ciclev10032022m.g Citrus clementina HOM05D006399 ORTHO05D007988 4.2e-63 246.5 465 35.3
PRCOL_00004009 Prasinoderma coloniale HOM05D006399 ORTHO05D007988 2.8e-59 233.8 392 37.5
Lj7C251T2 Lonicera japonica HOM05D006399 ORTHO05D007988 1.6e-54 218.0 306 41.5
COL.COLO4_27992 Corchorus olitorius HOM05D006399 ORTHO05D007988 3.7e-35 153.7 189 48.7
Pp3c9_20180 Physcomitrium patens HOM05D006399 ORTHO05D007988 4.8e-35 153.3 435 32.0
Lj7P254T18 Lonicera japonica HOM05D006399 ORTHO05D007988 2.5e-31 141.0 110 62.7
CDE02G1760 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 8.0e-30 136.0 129 52.7
TWI75G1459 Tripterygium wilfordii HOM05D006399 ORTHO05D007988 2.0e-28 131.3 180 42.2
AagrBONN_evm.TU.Sc2ySwM_362.1792 Anthoceros agrestis HOM05D006399 ORTHO05D007988 1.1e-26 125.6 379 29.3
Pp3c11_9510 Physcomitrium patens HOM05D006399 ORTHO05D007988 1.4e-26 125.2 483 28.6
SEGI_07124 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 5.3e-26 123.2 329 33.4
AagrBONN_evm.TU.Sc2ySwM_362.1561 Anthoceros agrestis HOM05D006399 ORTHO05D007988 1.4e-21 108.6 299 30.8
Hma1.2p1_0235F.1_g098770 Hydrangea macrophylla HOM05D006399 ORTHO05D007988 1.2e-20 105.5 54 83.3
SGA_v2.0_scaffold109G31082 Striga asiatica HOM05D006399 ORTHO05D007988 2.0e-09 68.2 115 36.5


User provided reference genes

Program Settings