Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_699.g19773 Utricularia gibba HOM05D006103 ORTHO05D007468 3.4e-168 595.1 341 100.0
MSTRG.13771 Avicennia marina HOM05D006103 ORTHO05D007468 7.4e-99 364.8 342 61.7
SGA_v2.0_scaffold20G09256 Striga asiatica HOM05D006103 ORTHO05D007468 7.4e-99 364.8 346 62.4
Oeu054287.1 Olea europaea HOM05D006103 ORTHO05D007468 3.4e-96 355.9 342 62.9
Dinv25153 Davidia involucrata HOM05D006103 ORTHO05D007468 1.2e-93 347.4 341 60.4
Cc08_g11160 Coffea canephora HOM05D006103 ORTHO05D007468 5.7e-91 338.6 332 61.1
CSS0027189 Camellia sinensis var. sinensis HOM05D006103 ORTHO05D007468 9.6e-91 337.8 341 62.2
CSS0016826 Camellia sinensis var. sinensis HOM05D006103 ORTHO05D007468 2.8e-90 336.3 341 61.0
Lj8A286T53 Lonicera japonica HOM05D006103 ORTHO05D007468 8.2e-90 334.7 334 60.2
DCAR_004514 Daucus carota HOM05D006103 ORTHO05D007468 1.1e-89 334.3 337 61.7
Thecc.03G237900 Theobroma cacao HOM05D006103 ORTHO05D007468 1.1e-89 334.3 337 63.5
Migut.E01036 Erythranthe guttata HOM05D006103 ORTHO05D007468 3.4e-88 329.3 339 58.7
Migut.E01310 Erythranthe guttata HOM05D006103 ORTHO05D007468 3.4e-88 329.3 339 58.7
Solyc06g060990.4 Solanum lycopersicum HOM05D006103 ORTHO05D007468 3.4e-88 329.3 341 60.1
Lj8C280G0 Lonicera japonica HOM05D006103 ORTHO05D007468 4.5e-88 328.9 334 53.6
Nitab4.5_0000506g0180 Nicotiana tabacum HOM05D006103 ORTHO05D007468 4.5e-88 328.9 339 60.2
Actinidia03414 Actinidia chinensis HOM05D006103 ORTHO05D007468 1.3e-87 327.4 335 61.5
Sopen06g021130 Solanum pennellii HOM05D006103 ORTHO05D007468 2.2e-87 326.6 343 58.6
CANSAT21G0053 Cannabis sativa HOM05D006103 ORTHO05D007468 3.8e-87 325.9 332 59.6
Duzib205G0801 Durio zibethinus HOM05D006103 ORTHO05D007468 5.0e-87 325.5 338 59.8
CAN.G422.12 Capsicum annuum HOM05D006103 ORTHO05D007468 6.5e-87 325.1 341 59.2
Eucgr.E00334 Eucalyptus grandis HOM05D006103 ORTHO05D007468 2.5e-86 323.2 337 58.8
RcHm_v2.0_Chr7g0206421 Rosa chinensis HOM05D006103 ORTHO05D007468 3.2e-86 322.8 342 60.2
CsaV3_3G002190 Cucumis sativus L. HOM05D006103 ORTHO05D007468 5.5e-86 322.0 338 58.6
ClCG10G002100 Citrullus lanatus HOM05D006103 ORTHO05D007468 7.2e-86 321.6 345 58.8
Gohir.D08G182200 Gossypium hirsutum HOM05D006103 ORTHO05D007468 2.1e-85 320.1 337 58.5
TAR375G0262 Trochodendron aralioides HOM05D006103 ORTHO05D007468 2.1e-85 320.1 334 59.0
FAN18G2558 Fragaria x ananassa HOM05D006103 ORTHO05D007468 3.6e-85 319.3 337 59.9
PGSC0003DMG400026583 Solanum tuberosum HOM05D006103 ORTHO05D007468 3.6e-85 319.3 336 59.8
Gorai.004G191100 Gossypium raimondii HOM05D006103 ORTHO05D007468 7.9e-85 318.2 339 56.0
MELO3C013891.2 Cucumis melo HOM05D006103 ORTHO05D007468 1.3e-84 317.4 346 59.0
FAN04G1103 Fragaria x ananassa HOM05D006103 ORTHO05D007468 2.3e-84 316.6 338 54.1
FvH4_5g20690 Fragaria vesca HOM05D006103 ORTHO05D007468 3.0e-84 316.2 337 59.9
Cpa.g.sc98.70 Carica papaya HOM05D006103 ORTHO05D007468 3.9e-84 315.8 340 52.1
Lsat_1_v5_gn_6_94780 Lactuca sativa HOM05D006103 ORTHO05D007468 3.9e-84 315.8 333 57.1
Prupe.5G053300 Prunus persica HOM05D006103 ORTHO05D007468 5.1e-84 315.5 342 54.7
PGR042G3635 Punica granatum HOM05D006103 ORTHO05D007468 5.1e-84 315.5 338 58.9
arahy.Tifrunner.gnm1.ann1.GKQN4T Arachis hypogaea HOM05D006103 ORTHO05D007468 6.7e-84 315.1 332 60.8
FAN08G0488 Fragaria x ananassa HOM05D006103 ORTHO05D007468 6.7e-84 315.1 337 58.5
Sed0003222 Sechium edule HOM05D006103 ORTHO05D007468 6.7e-84 315.1 345 58.6
Sp2g11900 Schrenkiella parvula HOM05D006103 ORTHO05D007468 1.1e-83 314.3 331 58.6
Haze_08348 Corylus avellana HOM05D006103 ORTHO05D007468 2.5e-83 313.2 330 60.6
vmacro00388 Vaccinium macrocarpon HOM05D006103 ORTHO05D007468 2.5e-83 313.2 405 50.4
CiPaw.11G084400 Carya illinoinensis HOM05D006103 ORTHO05D007468 4.3e-83 312.4 334 58.7
AUR62007192 Chenopodium quinoa HOM05D006103 ORTHO05D007468 4.3e-83 312.4 337 50.7
Manes.17G024600 Manihot esculenta HOM05D006103 ORTHO05D007468 5.7e-83 312.0 339 51.9
Carub.0008s0066 Capsella rubella HOM05D006103 ORTHO05D007468 7.4e-83 311.6 337 51.0
Gohir.A08G162200 Gossypium hirsutum HOM05D006103 ORTHO05D007468 9.7e-83 311.2 337 54.9
AL8G11110 Arabidopsis lyrata HOM05D006103 ORTHO05D007468 1.3e-82 310.8 331 56.2
Potri.001G149800 Populus trichocarpa HOM05D006103 ORTHO05D007468 1.3e-82 310.8 331 54.4
Thhalv10000969m.g Eutrema salsugineum HOM05D006103 ORTHO05D007468 1.6e-82 310.5 331 52.0
Sabra01G0119800 Salix brachista HOM05D006103 ORTHO05D007468 1.6e-82 310.5 337 58.2
Ciclev10021261m.g Citrus clementina HOM05D006103 ORTHO05D007468 2.2e-82 310.1 337 57.3
PSO063G5173 Papaver somniferum HOM05D006103 ORTHO05D007468 2.2e-82 310.1 340 55.0
Aqoxy3G02600 Aquilegia oxysepala HOM05D006103 ORTHO05D007468 2.8e-82 309.7 333 58.3
FAN13G0941 Fragaria x ananassa HOM05D006103 ORTHO05D007468 3.7e-82 309.3 337 54.0
BraA02t08094Z Brassica rapa HOM05D006103 ORTHO05D007468 1.8e-81 307.0 331 51.7
CARHR174300 Cardamine hirsuta HOM05D006103 ORTHO05D007468 1.8e-81 307.0 337 51.3
QL12p008443 Quercus lobata HOM05D006103 ORTHO05D007468 1.8e-81 307.0 333 57.1
Atru.chr9.1156 Acer truncatum HOM05D006103 ORTHO05D007468 4.1e-81 305.8 339 54.3
A02p30800 Brassica napus HOM05D006103 ORTHO05D007468 9.0e-81 304.7 331 51.4
C02p48360 Brassica napus HOM05D006103 ORTHO05D007468 9.0e-81 304.7 329 51.1
BolC2t10867H Brassica oleracea HOM05D006103 ORTHO05D007468 9.0e-81 304.7 329 51.1
BcaC03g16934 Brassica carinata HOM05D006103 ORTHO05D007468 1.2e-80 304.3 331 50.8
C02p28550 Brassica napus HOM05D006103 ORTHO05D007468 3.4e-80 302.8 331 50.8
BolC2t08897H Brassica oleracea HOM05D006103 ORTHO05D007468 3.4e-80 302.8 331 50.8
HanXRQChr03g0089621 Helianthus annuus HOM05D006103 ORTHO05D007468 5.9e-80 302.0 340 49.1
MD04G1054200 Malus domestica HOM05D006103 ORTHO05D007468 5.9e-80 302.0 352 50.6
BcaC03g15262 Brassica carinata HOM05D006103 ORTHO05D007468 2.9e-79 299.7 331 50.5
Glyma.05G067000 Glycine max HOM05D006103 ORTHO05D007468 2.9e-79 299.7 332 58.1
Phvul.003G226000 Phaseolus vulgaris HOM05D006103 ORTHO05D007468 2.9e-79 299.7 332 56.9
AT5G47090 Arabidopsis thaliana HOM05D006103 ORTHO05D007468 3.8e-79 299.3 331 50.2
CDE02G1890 Ceratophyllum demersum HOM05D006103 ORTHO05D007468 6.5e-79 298.5 339 50.1
Lalb_Chr16g0386381 Lupinus albus HOM05D006103 ORTHO05D007468 1.4e-78 297.4 332 56.9
TWI60G1123 Tripterygium wilfordii HOM05D006103 ORTHO05D007468 5.5e-78 295.4 345 48.7
MBI04_g46823_MAGBIO Magnolia biondii HOM05D006103 ORTHO05D007468 1.2e-77 294.3 330 50.0
Lj4g0004061 Lotus japonicus HOM05D006103 ORTHO05D007468 2.1e-77 293.5 337 57.6
ECA240G1687 Erigeron canadensis HOM05D005140 ORTHO05D006288 1.0e-76 291.2 320 48.8
VMungo0251G0880 Vigna mungo HOM05D006103 ORTHO05D007468 1.4e-76 290.8 338 53.3
Rhsim04G0176100 Rhododendron simsii HOM05D006103 ORTHO05D007468 1.7e-74 283.9 284 55.6
Ca_22022_v3 Cicer arietinum L. HOM05D006103 ORTHO05D007468 2.2e-74 283.5 337 47.5
Aa31LG9G5870 Aethionema arabicum HOM05D006103 ORTHO05D007468 2.8e-74 283.1 350 54.9
Hund11307 Selenicereus undatus HOM05D006103 ORTHO05D007468 8.2e-74 281.6 283 60.4
Medtr4g099190 Medicago truncatula HOM05D006103 ORTHO05D007468 1.8e-73 280.4 342 52.6
Peaxi162Scf00190g00616 Petunia axillaris HOM05D006103 ORTHO05D007468 2.6e-72 276.6 282 60.3
SHI07660 Sapria himalayana HOM05D006103 ORTHO05D007468 6.5e-71 271.9 333 45.3
Os06g0139700 Oryza sativa ssp. japonica HOM05D006103 ORTHO05D007468 1.9e-70 270.4 332 49.4
Zm00001eb377550 Zea mays HOM05D006103 ORTHO05D007468 2.5e-70 270.0 339 49.0
CDE11G0859 Ceratophyllum demersum HOM05D006103 ORTHO05D007468 1.6e-69 267.3 290 50.7
EL10Ac5g12236 Beta vulgaris HOM05D006103 ORTHO05D007468 6.1e-69 265.4 343 51.6
Dinv28889 Davidia involucrata HOM05D006103 ORTHO05D007468 3.9e-68 262.7 191 67.5
CANSAT21G0160 Cannabis sativa HOM05D001479 ORTHO05D007468 4.4e-67 259.2 184 66.8
CANSAT21G1035 Cannabis sativa HOM05D006103 ORTHO05D007468 4.4e-67 259.2 184 66.8
SEGI_16450 Sequoiadendron giganteum HOM05D006103 ORTHO05D007468 9.7e-67 258.1 345 49.9
Sc22g0001160 Simmondsia chinensis HOM05D006103 ORTHO05D007468 2.8e-66 256.5 189 68.3
ATR0665G401 Amborella trichopoda HOM05D006103 ORTHO05D007468 1.8e-65 253.8 330 48.2
GSVIVG01013285001 Vitis vinifera HOM05D006103 ORTHO05D007468 5.3e-65 252.3 186 65.6
BcaC07g39778 Brassica carinata HOM05D006103 ORTHO05D007468 1.1e-62 244.6 331 45.0
Nitab4.5_0013289g0030 Nicotiana tabacum HOM05D006103 ORTHO05D007468 3.0e-60 236.5 256 59.8
Psat4g074520 Pisum sativum HOM05D006103 ORTHO05D007468 1.4e-57 227.6 335 42.7
HPP92_014398 Vanilla planifolia HOM05D006103 ORTHO05D007468 1.1e-54 218.0 182 54.9
TPR.G25737 Trifolium pratense HOM05D006103 ORTHO05D007468 4.2e-54 216.1 348 44.8
Pp3c16_2730 Physcomitrium patens HOM05D006103 ORTHO05D007468 5.5e-54 215.7 337 45.1
Hma1.2p1_1672F.1_g296810 Hydrangea macrophylla HOM05D006103 ORTHO05D007468 8.0e-53 211.8 230 58.3
BolC8t50609H Brassica oleracea HOM05D006103 ORTHO05D007468 9.1e-49 198.4 158 63.3
AUR62018811 Chenopodium quinoa HOM05D006103 ORTHO05D007468 4.5e-48 196.1 227 46.7
SMO171G0121 Selaginella moellendorffii HOM05D006103 ORTHO05D007468 3.8e-47 193.0 334 41.3
AagrBONN_evm.TU.Sc2ySwM_368.2081 Anthoceros agrestis HOM05D006103 ORTHO05D007468 2.3e-44 183.7 319 41.4
C08p30000 Brassica napus HOM05D006103 ORTHO05D007468 1.7e-42 177.6 137 64.2
Lj8A284T15 Lonicera japonica HOM05D006103 ORTHO05D007468 1.1e-41 174.9 136 64.0
CBR_g49667 Chara braunii HOM05D006103 ORTHO05D007468 7.8e-40 168.7 412 37.4
AL8G11000 Arabidopsis lyrata HOM05D006103 ORTHO05D007468 4.4e-27 126.3 178 53.4
Actinidia02205 Actinidia chinensis HOM05D006103 ORTHO05D007468 4.3e-22 109.8 69 75.4
SHI06573 Sapria himalayana HOM05D006103 ORTHO05D007468 5.6e-22 109.4 123 48.8
MCO11G792 Micromonas commoda HOM05D006103 ORTHO05D007468 3.6e-21 106.7 350 26.6
Lj8A284T12 Lonicera japonica HOM05D006103 ORTHO05D007468 6.2e-21 105.9 136 43.4
COL.COLO4_06694 Corchorus olitorius HOM05D006103 ORTHO05D007468 1.5e-19 101.3 55 85.5
Cfa012348 Carpinus fangiana HOM05D006103 ORTHO05D007468 9.9e-19 98.6 66 71.2
Lj8C284T4 Lonicera japonica HOM05D006103 ORTHO05D007468 2.2e-18 97.4 57 75.4
RcHm_v2.0_Chr4g0446321 Rosa chinensis HOM05D006103 ORTHO05D007468 2.7e-16 90.5 60 68.3
Cre03.g170100 Chlamydomonas reinhardtii HOM05D006103 ORTHO05D007468 3.3e-14 83.6 142 35.9
RcHm_v2.0_Chr6g0308851 Rosa chinensis HOM05D006103 ORTHO05D007468 1.6e-13 81.3 52 73.1
SHI06574 Sapria himalayana HOM05D006103 ORTHO05D007468 4.7e-13 79.7 173 32.4
Actinidia25920 Actinidia chinensis HOM05D006103 ORTHO05D007468 2.3e-12 77.4 79 51.9
Carub.0008s0069 Capsella rubella HOM05D006103 ORTHO05D007468 5.2e-12 76.3 51 72.5
CARHR174410 Cardamine hirsuta HOM05D006103 ORTHO05D007468 4.4e-11 73.2 49 69.4
Lj8A280T20 Lonicera japonica HOM05D006103 ORTHO05D007468 1.2e-08 65.1 43 69.8


User provided reference genes

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