Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_699.g19742 Utricularia gibba HOM05D000172 ORTHO05D000273 2.0e-107 392.5 202 100.0
GSVIVG01026977001 Vitis vinifera HOM05D000172 ORTHO05D000273 5.8e-19 98.6 187 31.0
Nn7g37308 Nelumbo nucifera HOM05D000172 ORTHO05D000273 3.8e-18 95.9 184 36.4
Atru.chr5.569 Acer truncatum HOM05D000172 ORTHO05D000273 1.1e-17 94.4 221 32.6
Atru.chr5.588 Acer truncatum HOM05D000172 ORTHO05D000273 1.1e-17 94.4 221 32.6
Oeu010631.1 Olea europaea HOM05D000172 ORTHO05D000273 1.4e-17 94.0 219 28.3
Oeu010632.1 Olea europaea HOM05D000172 ORTHO05D000273 1.4e-17 94.0 219 28.3
TWI14G0094 Tripterygium wilfordii HOM05D000172 ORTHO05D000273 9.3e-17 91.3 219 30.6
Duzib138G1387 Durio zibethinus HOM05D000172 ORTHO05D000273 1.6e-16 90.5 219 29.7
SGA_v2.0_scaffold111G31461 Striga asiatica HOM05D000172 ORTHO05D000273 1.6e-16 90.5 218 33.5
Cfa003863 Carpinus fangiana HOM05D000830 ORTHO05D003205 2.7e-16 89.7 217 29.5
CSS0038862 Camellia sinensis var. sinensis HOM05D000172 ORTHO05D000273 4.6e-16 89.0 184 32.1
CSS0041380 Camellia sinensis var. sinensis HOM05D000172 ORTHO05D000273 4.6e-16 89.0 184 32.1
MD01G1072100 Malus domestica HOM05D000172 ORTHO05D000273 7.9e-16 88.2 221 30.3
TAR629G1740 Trochodendron aralioides HOM05D000172 ORTHO05D000273 7.9e-16 88.2 216 31.9
PGR031G0035 Punica granatum HOM05D000172 ORTHO05D000273 1.0e-15 87.8 218 31.7
Eucgr.E00095 Eucalyptus grandis HOM05D000172 ORTHO05D000273 1.3e-15 87.4 184 28.3
Thecc.03G288200 Theobroma cacao HOM05D000172 ORTHO05D000273 1.3e-15 87.4 216 31.5
Peaxi162Scf00020g00168 Petunia axillaris HOM05D000172 ORTHO05D000273 1.8e-15 87.0 213 28.2
Dinv38892 Davidia involucrata HOM05D000501 ORTHO05D000376 2.3e-15 86.7 217 29.5
vmacro20889 Vaccinium macrocarpon HOM05D000172 ORTHO05D000273 2.3e-15 86.7 210 31.4
vmacro22844 Vaccinium macrocarpon HOM05D000172 ORTHO05D000273 2.3e-15 86.7 210 31.4
Oeu019820.1 Olea europaea HOM05D000172 ORTHO05D000273 5.1e-15 85.5 224 29.5
QL04p055756 Quercus lobata HOM05D000172 ORTHO05D000273 5.1e-15 85.5 184 29.3
Cfa012259 Carpinus fangiana HOM05D000172 ORTHO05D000273 6.7e-15 85.1 185 31.9
FAN03G1504 Fragaria x ananassa HOM05D000172 ORTHO05D000273 6.7e-15 85.1 184 31.0
RcHm_v2.0_Chr1g0357811 Rosa chinensis HOM05D000172 ORTHO05D000273 6.7e-15 85.1 184 30.4
Cc02_g38650 Coffea canephora HOM05D000172 ORTHO05D000273 1.1e-14 84.3 190 29.5
Glyma.16G031000 Glycine max HOM05D000172 ORTHO05D000273 1.1e-14 84.3 191 29.3
Duzib205G0073 Durio zibethinus HOM05D000172 ORTHO05D000273 1.5e-14 84.0 217 33.2
Potri.003G133400 Populus trichocarpa HOM05D000172 ORTHO05D000273 1.5e-14 84.0 221 30.8
CiPaw.01G068400 Carya illinoinensis HOM05D000172 ORTHO05D000273 2.5e-14 83.2 185 28.1
CiPaw.02G035800 Carya illinoinensis HOM05D000172 ORTHO05D000273 2.5e-14 83.2 176 29.0
FAN10G2452 Fragaria x ananassa HOM05D000172 ORTHO05D000273 2.5e-14 83.2 184 29.9
FAN10G3434 Fragaria x ananassa HOM05D000172 ORTHO05D000273 2.5e-14 83.2 184 29.9
FvH4_7g15490 Fragaria vesca HOM05D000172 ORTHO05D000273 3.3e-14 82.8 184 29.9
FAN06G0542 Fragaria x ananassa HOM05D000172 ORTHO05D000273 3.3e-14 82.8 184 29.9
FAN06G3241 Fragaria x ananassa HOM05D000172 ORTHO05D000273 3.3e-14 82.8 184 29.9
Lj7P506T63 Lonicera japonica HOM05D000172 ORTHO05D000273 3.3e-14 82.8 185 28.1
Nn1g01712 Nelumbo nucifera HOM05D000172 ORTHO05D000273 3.3e-14 82.8 185 33.0
Cc08_g15400 Coffea canephora HOM05D000172 ORTHO05D000273 4.3e-14 82.4 222 31.1
Prupe.2G178500 Prunus persica HOM05D000172 ORTHO05D000273 7.4e-14 81.6 216 29.2
TAR636G1394 Trochodendron aralioides HOM05D000172 ORTHO05D000273 7.4e-14 81.6 216 28.2
Potri.001G098100 Populus trichocarpa HOM05D000172 ORTHO05D000273 1.3e-13 80.9 222 31.1
VMungo0331G0224 Vigna mungo HOM05D000172 ORTHO05D000273 1.3e-13 80.9 215 28.8
Gorai.008G250700 Gossypium raimondii HOM05D000172 ORTHO05D000273 1.6e-13 80.5 185 31.4
DCAR_008347 Daucus carota HOM05D000172 ORTHO05D000273 3.7e-13 79.3 221 28.5
Potri.002G165100 Populus trichocarpa HOM05D000172 ORTHO05D000273 3.7e-13 79.3 187 31.6
Haze_08739 Corylus avellana HOM05D000172 ORTHO05D000273 4.8e-13 79.0 185 30.8
Gohir.A12G233320 Gossypium hirsutum HOM05D000172 ORTHO05D000273 4.8e-13 79.0 185 29.7
Rhsim01G0166200 Rhododendron simsii HOM05D000172 ORTHO05D000273 4.8e-13 79.0 210 29.0
Gohir.D12G234400 Gossypium hirsutum HOM05D000172 ORTHO05D000273 6.2e-13 78.6 186 32.3
Haze_15571 Corylus avellana HOM05D000172 ORTHO05D000273 1.1e-12 77.8 210 27.1
AL4G45400 Arabidopsis lyrata HOM05D000172 ORTHO05D000273 1.4e-12 77.4 188 30.9
CiPaw.11G128200 Carya illinoinensis HOM05D000172 ORTHO05D000273 1.4e-12 77.4 188 28.7
Gohir.A08G113200 Gossypium hirsutum HOM05D000172 ORTHO05D000273 1.4e-12 77.4 213 29.6
Gohir.A08G127901 Gossypium hirsutum HOM05D000172 ORTHO05D000273 1.4e-12 77.4 219 26.5
Rhsim02G0236600 Rhododendron simsii HOM05D000172 ORTHO05D000273 1.4e-12 77.4 224 29.9
Gorai.004G137100 Gossypium raimondii HOM05D000172 ORTHO05D000273 1.8e-12 77.0 206 29.6
CiPaw.11G128100 Carya illinoinensis HOM05D000172 ORTHO05D000273 2.4e-12 76.6 188 28.7
Manes.05G028600 Manihot esculenta HOM05D000172 ORTHO05D000273 2.4e-12 76.6 170 32.4
Phvul.010G105100 Phaseolus vulgaris HOM05D000172 ORTHO05D000273 2.4e-12 76.6 208 26.4
AT2G46150 Arabidopsis thaliana HOM05D000172 ORTHO05D000273 3.1e-12 76.3 216 30.6
COL.COLO4_12783 Corchorus olitorius HOM05D000172 ORTHO05D000273 4.1e-12 75.9 162 30.2
Gohir.D08G134000 Gossypium hirsutum HOM05D000172 ORTHO05D000273 4.1e-12 75.9 206 29.1
TWI23G1075 Tripterygium wilfordii HOM05D000172 ORTHO05D000273 4.1e-12 75.9 219 27.4
MELO3C005722.2 Cucumis melo HOM05D000172 ORTHO05D000273 5.3e-12 75.5 183 31.1
Sabra01G0073400 Salix brachista HOM05D000172 ORTHO05D000273 5.3e-12 75.5 210 29.5
Sp4g28210 Schrenkiella parvula HOM05D000172 ORTHO05D000273 5.3e-12 75.5 207 30.9
Cpa.g.sc122.1 Carica papaya HOM05D000172 ORTHO05D000273 9.0e-12 74.7 191 28.3
Manes.02G016000 Manihot esculenta HOM05D000172 ORTHO05D000273 9.0e-12 74.7 220 28.2
Actinidia28334 Actinidia chinensis HOM05D000172 ORTHO05D000273 1.2e-11 74.3 193 31.6
ClCG01G002260 Citrullus lanatus HOM05D000172 ORTHO05D000273 2.0e-11 73.6 217 29.5
COL.COLO4_08341 Corchorus olitorius HOM05D000172 ORTHO05D000273 2.0e-11 73.6 201 29.9
CsaV3_5G002330 Cucumis sativus L. HOM05D000172 ORTHO05D000273 2.0e-11 73.6 183 32.2
CARHR141430 Cardamine hirsuta HOM05D000172 ORTHO05D000273 2.6e-11 73.2 175 30.9
MSTRG.4833 Avicennia marina HOM05D000172 ORTHO05D000273 3.4e-11 72.8 166 30.7
BcaC02g12497 Brassica carinata HOM05D000172 ORTHO05D000273 3.4e-11 72.8 207 30.0
Lj2P176T20 Lonicera japonica HOM05D000172 ORTHO05D000273 3.4e-11 72.8 215 28.4
Ciclev10023484m.g Citrus clementina HOM05D000172 ORTHO05D000273 4.5e-11 72.4 187 28.9
PGR031G3194 Punica granatum HOM05D000172 ORTHO05D000273 4.5e-11 72.4 197 25.4
BraA05t19162Z Brassica rapa HOM05D000172 ORTHO05D000273 5.8e-11 72.0 207 30.0
A05p01660 Brassica napus HOM05D000172 ORTHO05D000273 7.6e-11 71.6 207 30.0
Glyma.05G212600 Glycine max HOM05D000172 ORTHO05D000273 1.0e-10 71.2 226 27.0
C04p01900 Brassica napus HOM05D000172 ORTHO05D000273 1.3e-10 70.9 207 29.5
Sopen01g038960 Solanum pennellii HOM05D000172 ORTHO05D000273 1.3e-10 70.9 225 26.2
HPP92_009037 Vanilla planifolia HOM05D000172 ORTHO05D000273 1.3e-10 70.9 145 33.8
Eucgr.D01803 Eucalyptus grandis HOM05D000172 ORTHO05D000273 2.2e-10 70.1 222 28.4
FAN01G1599 Fragaria x ananassa HOM05D000172 ORTHO05D000273 2.9e-10 69.7 117 35.0
VMungo0251G2003 Vigna mungo HOM05D000172 ORTHO05D000273 2.9e-10 69.7 223 26.5
CSS0011187 Camellia sinensis var. sinensis HOM05D000172 ORTHO05D000273 3.8e-10 69.3 187 29.9
Sed0022649 Sechium edule HOM05D000172 ORTHO05D000273 3.8e-10 69.3 184 29.3
Aqoxy4G00154 Aquilegia oxysepala HOM05D000172 ORTHO05D000273 5.0e-10 68.9 186 28.0
Lj3g0006203 Lotus japonicus HOM05D000172 ORTHO05D000273 5.0e-10 68.9 190 28.4
Sabra14G0065900 Salix brachista HOM05D000172 ORTHO05D000273 5.0e-10 68.9 183 28.4
arahy.Tifrunner.gnm1.ann1.UURP5G Arachis hypogaea HOM05D000172 ORTHO05D000273 6.5e-10 68.6 215 27.0
FAN04G2734 Fragaria x ananassa HOM05D000172 ORTHO05D000273 6.5e-10 68.6 216 28.2
Nitab4.5_0000966g0070 Nicotiana tabacum HOM05D000172 ORTHO05D000273 6.5e-10 68.6 165 31.5
SGA_v2.0_scaffold11G05685 Striga asiatica HOM05D000172 ORTHO05D000273 6.5e-10 68.6 221 26.7
TWI60G0498 Tripterygium wilfordii HOM05D000172 ORTHO05D000273 6.5e-10 68.6 211 28.0
BcaC02g12710 Brassica carinata HOM05D000172 ORTHO05D000273 1.1e-09 67.8 207 28.0
Carub.0004s2883 Capsella rubella HOM05D000172 ORTHO05D000273 1.1e-09 67.8 188 27.1
Migut.N01467 Erythranthe guttata HOM05D000172 ORTHO05D000273 1.1e-09 67.8 164 26.8
FvH4_5g03460 Fragaria vesca HOM05D000172 ORTHO05D000273 1.1e-09 67.8 216 27.8
Manes.01G251900 Manihot esculenta HOM05D000172 ORTHO05D000273 1.1e-09 67.8 208 29.3
Haze_15570 Corylus avellana HOM05D000172 ORTHO05D000273 1.4e-09 67.4 217 31.8
BcaC02g07024 Brassica carinata HOM05D000172 ORTHO05D000273 1.9e-09 67.0 178 29.8
Dinv32526 Davidia involucrata HOM05D000172 ORTHO05D000273 1.9e-09 67.0 163 28.8
Glyma.08G019000 Glycine max HOM05D000172 ORTHO05D000273 1.9e-09 67.0 228 25.9
Psat7g028800 Pisum sativum HOM05D000172 ORTHO05D000273 1.9e-09 67.0 191 28.3
CANSAT21G1130 Cannabis sativa HOM05D000172 ORTHO05D000273 2.5e-09 66.6 219 29.7
HanXRQChr13g0394631 Helianthus annuus HOM05D000172 ORTHO05D000273 2.5e-09 66.6 221 28.5
Gohir.D08G149200 Gossypium hirsutum HOM05D000172 ORTHO05D000273 3.2e-09 66.2 219 25.6
MD06G1094700 Malus domestica HOM05D000172 ORTHO05D000273 3.2e-09 66.2 209 29.2
MD14G1114900 Malus domestica HOM05D000172 ORTHO05D000273 3.2e-09 66.2 187 27.8
C04p72120 Brassica napus HOM05D000172 ORTHO05D000273 4.2e-09 65.9 173 28.9
HanXRQChr16g0523691 Helianthus annuus HOM05D000172 ORTHO05D000273 4.2e-09 65.9 164 26.2
Lalb_Chr09g0332831 Lupinus albus HOM05D000172 ORTHO05D000273 4.2e-09 65.9 193 26.4
Phvul.002G293800 Phaseolus vulgaris HOM05D000172 ORTHO05D000273 5.5e-09 65.5 183 27.9
Sabra02G0146400 Salix brachista HOM05D000172 ORTHO05D000273 5.5e-09 65.5 215 27.4
Cc08_g15390 Coffea canephora HOM05D000172 ORTHO05D000273 7.1e-09 65.1 185 29.7
Lsat_1_v5_gn_6_4360 Lactuca sativa HOM05D000172 ORTHO05D000273 7.1e-09 65.1 224 29.5
Lalb_Chr17g0338981 Lupinus albus HOM05D000172 ORTHO05D000273 9.3e-09 64.7 185 27.0
vmacro20890 Vaccinium macrocarpon HOM05D000172 ORTHO05D000273 9.3e-09 64.7 185 27.0
Atru.chr9.2098 Acer truncatum HOM05D000172 ORTHO05D000273 1.2e-08 64.3 209 27.8
A01p14910 Brassica napus HOM05D012778 ORTHO05D014320 1.2e-08 64.3 177 27.7
BraA01t01432Z Brassica rapa HOM05D012778 ORTHO05D014320 1.2e-08 64.3 177 27.7
FAN08G1101 Fragaria x ananassa HOM05D000172 ORTHO05D000273 1.2e-08 64.3 216 27.8
Thecc.01G351700 Theobroma cacao HOM05D000172 ORTHO05D000273 1.2e-08 64.3 158 25.9
BcaC09g50971 Brassica carinata HOM05D012778 ORTHO05D014320 1.6e-08 63.9 177 26.6
C01p18590 Brassica napus HOM05D012778 ORTHO05D014320 1.6e-08 63.9 177 26.6
BolC1t01787H Brassica oleracea HOM05D012778 ORTHO05D014320 1.6e-08 63.9 177 26.6
FAN13G1815 Fragaria x ananassa HOM05D000172 ORTHO05D000273 2.1e-08 63.5 215 27.9
CANSAT94G0009 Cannabis sativa HOM05D000172 ORTHO05D000273 2.7e-08 63.2 184 26.6
Prupe.6G299500 Prunus persica HOM05D000172 ORTHO05D000273 2.7e-08 63.2 188 28.7
Zm00001eb153970 Zea mays HOM05D000172 ORTHO05D000273 2.7e-08 63.2 176 27.3
CAN.G78.133 Capsicum annuum HOM05D000172 ORTHO05D000273 7.9e-08 61.6 217 23.5
Duzib268G0003 Durio zibethinus HOM05D000172 ORTHO05D000273 7.9e-08 61.6 158 25.9
Os02g0265800 Oryza sativa ssp. japonica HOM05D000172 ORTHO05D000273 7.9e-08 61.6 195 27.2
Mapoly0088s0022 Marchantia polymorpha HOM05D000172 ORTHO05D000273 1.0e-07 61.2 207 26.6
THA.LOC104802047 Tarenaya hassleriana HOM05D000172 ORTHO05D000273 1.3e-07 60.8 209 26.3
MELO3C021179.2 Cucumis melo HOM05D000172 ORTHO05D000273 1.8e-07 60.5 186 28.0
DCAR_004608 Daucus carota HOM05D000172 ORTHO05D000273 1.8e-07 60.5 201 28.9
Thecc.06G215600 Theobroma cacao HOM05D000172 ORTHO05D000273 1.8e-07 60.5 167 28.7
GSVIVG01029848001 Vitis vinifera HOM05D000172 ORTHO05D000273 2.3e-07 60.1 139 32.4
Gorai.004G155000 Gossypium raimondii HOM05D000172 ORTHO05D000273 3.0e-07 59.7 219 25.6
AUR62022623 Chenopodium quinoa HOM05D001249 ORTHO05D002770 3.9e-07 59.3 160 25.6
FAN18G2802 Fragaria x ananassa HOM05D000172 ORTHO05D000781 3.9e-07 59.3 167 26.9
HanXRQChr13g0394661 Helianthus annuus HOM05D000172 ORTHO05D000273 3.9e-07 59.3 154 33.1
DCAR_005365 Daucus carota HOM05D000041 ORTHO05D000061 6.7e-07 58.5 162 28.4
DCAR_000638 Daucus carota HOM05D000172 ORTHO05D000273 8.7e-07 58.2 176 27.8
Thhalv10001755m.g Eutrema salsugineum HOM05D000172 ORTHO05D000273 8.7e-07 58.2 153 26.1
PSO384G4935 Papaver somniferum HOM05D000172 ORTHO05D000273 1.1e-06 57.8 185 25.4
SalBow3G0578 Salvia bowleyana HOM05D000172 ORTHO05D000273 1.1e-06 57.8 212 26.9
Hma1.2p1_0216F.1_g091190 Hydrangea macrophylla HOM05D000172 ORTHO05D000273 1.5e-06 57.4 134 29.9
MSTRG.25639 Avicennia marina HOM05D000172 ORTHO05D000273 2.5e-06 56.6 224 26.8
CARHR230990 Cardamine hirsuta HOM05D012778 ORTHO05D014320 3.3e-06 56.2 181 26.5
Cfa014427 Carpinus fangiana HOM05D000172 ORTHO05D000273 3.3e-06 56.2 197 28.4
CSS0010033 Camellia sinensis var. sinensis HOM05D000172 ORTHO05D000273 5.7e-06 55.5 168 30.4
Ciclev10024039m.g Citrus clementina HOM05D000172 ORTHO05D000273 5.7e-06 55.5 175 30.3
Lsat_1_v5_gn_6_32621 Lactuca sativa HOM05D000172 ORTHO05D000273 5.7e-06 55.5 188 26.1
HPP92_005257 Vanilla planifolia HOM05D000172 ORTHO05D000273 5.7e-06 55.5 186 22.0
ATR1127G172 Amborella trichopoda HOM05D000172 ORTHO05D000273 7.4e-06 55.1 164 29.3
CiPaw.15G162300 Carya illinoinensis HOM05D000172 ORTHO05D000273 7.4e-06 55.1 210 29.5
THA.LOC104806281 Tarenaya hassleriana HOM05D000172 ORTHO05D000273 7.4e-06 55.1 186 29.0
TPR.G3424 Trifolium pratense HOM05D000172 ORTHO05D000273 7.4e-06 55.1 181 26.0
Zm00001eb353610 Zea mays HOM05D000172 ORTHO05D000273 7.4e-06 55.1 203 30.0
Cfa014425 Carpinus fangiana HOM05D000172 ORTHO05D000273 9.7e-06 54.7 185 28.6


User provided reference genes

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