Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_699.g19729 Utricularia gibba HOM05D007225 ORTHO05D009062 8.0e-135 483.8 251 100.0
Migut.H00686 Erythranthe guttata HOM05D007225 ORTHO05D009062 3.5e-45 186.0 253 46.6
MSTRG.23466 Avicennia marina HOM05D007225 ORTHO05D009062 8.8e-41 171.4 247 44.5
Atru.chr4.938 Acer truncatum HOM05D007225 ORTHO05D009062 2.4e-38 163.3 254 40.9
CSS0045766 Camellia sinensis var. sinensis HOM05D007225 ORTHO05D009062 1.7e-36 157.1 251 40.2
PGSC0003DMG400012541 Solanum tuberosum HOM05D007225 ORTHO05D009062 1.2e-34 151.0 253 40.7
Dinv24394 Davidia involucrata HOM05D007225 ORTHO05D009062 2.7e-34 149.8 251 38.6
Hund04436 Selenicereus undatus HOM05D007225 ORTHO05D009062 6.1e-34 148.7 259 38.6
CiPaw.04G081200 Carya illinoinensis HOM05D007225 ORTHO05D009062 3.0e-33 146.4 254 39.0
Oeu058297.1 Olea europaea HOM05D007225 ORTHO05D009062 8.8e-33 144.8 254 37.0
vmacro12787 Vaccinium macrocarpon HOM05D007225 ORTHO05D009062 3.4e-32 142.9 250 38.0
MD17G1201700 Malus domestica HOM05D007225 ORTHO05D009062 4.4e-32 142.5 254 39.8
Nitab4.5_0000386g0080 Nicotiana tabacum HOM05D007225 ORTHO05D009062 1.7e-31 140.6 252 39.7
Solyc01g105570.4 Solanum lycopersicum HOM05D007225 ORTHO05D009062 2.2e-31 140.2 252 39.7
Sopen01g048040 Solanum pennellii HOM05D007225 ORTHO05D009062 6.3e-31 138.7 252 38.5
Lsat_1_v5_gn_5_68521 Lactuca sativa HOM05D007225 ORTHO05D009062 1.4e-30 137.5 236 39.8
ECA233G3017 Erigeron canadensis HOM05D007225 ORTHO05D000131 5.4e-30 135.6 212 39.6
Ciclev10002244m.g Citrus clementina HOM05D007225 ORTHO05D009062 7.0e-30 135.2 254 39.4
Cc07_g18810 Coffea canephora HOM05D007225 ORTHO05D009062 7.0e-30 135.2 256 35.9
Prupe.4G273000 Prunus persica HOM05D007225 ORTHO05D009062 2.0e-29 133.7 253 36.4
CANSAT01G2273 Cannabis sativa HOM05D007225 ORTHO05D009062 1.3e-28 131.0 255 38.4
Eucgr.I00189 Eucalyptus grandis HOM05D007225 ORTHO05D009062 1.1e-27 127.9 250 36.4
RcHm_v2.0_Chr4g0412751 Rosa chinensis HOM05D007225 ORTHO05D009062 1.5e-27 127.5 253 36.0
PGR119G1418 Punica granatum HOM05D007225 ORTHO05D009062 2.5e-27 126.7 251 37.8
FAN07G2982 Fragaria x ananassa HOM05D007225 ORTHO05D009062 5.5e-27 125.6 254 35.0
CsaV3_2G019450 Cucumis sativus L. HOM05D007225 ORTHO05D009062 7.2e-27 125.2 252 33.7
Hma1.2p1_0539F.1_g174530 Hydrangea macrophylla HOM05D007225 ORTHO05D009062 7.2e-27 125.2 257 36.2
FAN12G1161 Fragaria x ananassa HOM05D007225 ORTHO05D009062 9.4e-27 124.8 254 35.4
Sed0013127 Sechium edule HOM05D007225 ORTHO05D009062 2.1e-26 123.6 251 35.1
FvH4_4g13030 Fragaria vesca HOM05D007225 ORTHO05D009062 2.7e-26 123.2 254 35.4
TAR625G0602 Trochodendron aralioides HOM05D007225 ORTHO05D009062 2.7e-26 123.2 257 35.8
Cpa.g.sc42.174 Carica papaya HOM05D007225 ORTHO05D009062 3.6e-26 122.9 256 34.8
DCAR_010250 Daucus carota HOM05D007225 ORTHO05D009062 8.0e-26 121.7 254 34.3
Thecc.01G134800 Theobroma cacao HOM05D007225 ORTHO05D009062 1.8e-25 120.6 252 34.9
COL.COLO4_35773 Corchorus olitorius HOM05D007225 ORTHO05D009062 2.3e-25 120.2 253 35.2
Sc07g0001760 Simmondsia chinensis HOM05D007225 ORTHO05D009062 2.3e-25 120.2 249 34.9
AUR62003589 Chenopodium quinoa HOM05D007225 ORTHO05D009062 6.8e-25 118.6 269 35.7
QL10p043051 Quercus lobata HOM05D007225 ORTHO05D009062 8.8e-25 118.2 296 33.1
PSO528G0250 Papaver somniferum HOM05D007225 ORTHO05D009062 1.2e-24 117.9 267 34.5
AUR62017902 Chenopodium quinoa HOM05D007225 ORTHO05D009062 5.7e-24 115.5 269 33.8
AUR62043562 Chenopodium quinoa HOM05D007225 ORTHO05D009062 5.7e-24 115.5 269 33.8
Lj4g0008022 Lotus japonicus HOM05D007225 ORTHO05D009062 5.7e-24 115.5 252 34.9
Lalb_Chr13g0296631 Lupinus albus HOM05D007225 ORTHO05D009062 5.7e-24 115.5 251 34.7
A06p30630 Brassica napus HOM05D007225 ORTHO05D009062 9.8e-24 114.8 249 36.5
BraA06t26013Z Brassica rapa HOM05D007225 ORTHO05D009062 9.8e-24 114.8 249 34.9
Gorai.011G119000 Gossypium raimondii HOM05D007225 ORTHO05D009062 9.8e-24 114.8 251 34.7
Gohir.D10G108600 Gossypium hirsutum HOM05D007225 ORTHO05D009062 1.7e-23 114.0 252 34.5
Ca_17629_v3 Cicer arietinum L. HOM05D007225 ORTHO05D009062 2.2e-23 113.6 253 33.6
MBI06_g27455_MAGBIO Magnolia biondii HOM05D007225 ORTHO05D009062 3.7e-23 112.8 259 32.0
Thhalv10004850m.g Eutrema salsugineum HOM05D007225 ORTHO05D009062 6.3e-23 112.1 251 35.9
Potri.005G064951 Populus trichocarpa HOM05D007225 ORTHO05D009062 1.1e-22 111.3 217 35.0
SGA_v2.0_scaffold20G09018 Striga asiatica HOM05D007225 ORTHO05D009062 1.1e-22 111.3 168 42.9
AagrBONN_evm.TU.Sc2ySwM_368.986 Anthoceros agrestis HOM05D007225 ORTHO05D009062 1.4e-22 110.9 271 33.9
PSO170G5625 Papaver somniferum HOM05D007225 ORTHO05D009062 1.4e-22 110.9 267 33.3
Potri.005G064800 Populus trichocarpa HOM05D007225 ORTHO05D009062 2.4e-22 110.2 216 33.8
Peaxi162Scf00172g00611 Petunia axillaris HOM05D007225 ORTHO05D009062 3.1e-22 109.8 156 42.3
AL8G41270 Arabidopsis lyrata HOM05D007225 ORTHO05D009062 7.0e-22 108.6 251 35.5
ClCG02G000390 Citrullus lanatus HOM05D007225 ORTHO05D009062 7.0e-22 108.6 226 33.2
Sabra05G0053800 Salix brachista HOM05D007225 ORTHO05D009062 9.2e-22 108.2 216 33.3
C03p62330 Brassica napus HOM05D007225 ORTHO05D009062 1.6e-21 107.5 251 35.1
TPR.G37342 Trifolium pratense HOM05D007225 ORTHO05D009062 1.6e-21 107.5 253 32.0
BcaC01g02654 Brassica carinata HOM05D007225 ORTHO05D009062 3.5e-21 106.3 251 34.7
BolC3t18495H Brassica oleracea HOM05D007225 ORTHO05D009062 3.5e-21 106.3 251 34.7
HanXRQChr12g0380581 Helianthus annuus HOM05D007225 ORTHO05D009062 3.5e-21 106.3 187 38.0
TAR381G0670 Trochodendron aralioides HOM05D007225 ORTHO05D009062 3.5e-21 106.3 257 31.9
Carub.0008s2479 Capsella rubella HOM05D007225 ORTHO05D009062 4.5e-21 105.9 251 35.5
AT5G64010 Arabidopsis thaliana HOM05D007225 ORTHO05D009062 5.9e-21 105.5 249 35.3
Psat7g045080 Pisum sativum HOM05D007225 ORTHO05D009062 2.9e-20 103.2 253 32.4
Sp2g27080 Schrenkiella parvula HOM05D007225 ORTHO05D009062 5.0e-20 102.4 251 33.1
ATR0709G077 Amborella trichopoda HOM05D007225 ORTHO05D009062 1.9e-19 100.5 245 33.1
HPP92_025180 Vanilla planifolia HOM05D007225 ORTHO05D009062 3.3e-19 99.8 273 30.4
DCAR_014328 Daucus carota HOM05D007225 ORTHO05D009062 4.3e-19 99.4 242 31.4
Duzib187G1928 Durio zibethinus HOM05D007225 ORTHO05D009062 4.3e-19 99.4 254 31.5
CARHR277930 Cardamine hirsuta HOM05D007225 ORTHO05D002208 5.6e-19 99.0 252 34.9
Aqoxy6G00280 Aquilegia oxysepala HOM05D007225 ORTHO05D009062 9.5e-19 98.2 262 30.9
Gohir.A10G156900 Gossypium hirsutum HOM05D007225 ORTHO05D009062 2.8e-18 96.7 172 37.2
GSVIVG01022343001 Vitis vinifera HOM05D007225 ORTHO05D009062 4.7e-18 95.9 150 38.0
Pp3c8_18500 Physcomitrium patens HOM05D007225 ORTHO05D009062 6.1e-18 95.5 190 33.7
Rhsim10G0132500 Rhododendron simsii HOM05D007225 ORTHO05D009062 6.1e-18 95.5 245 34.7
Nn5g28498 Nelumbo nucifera HOM05D007225 ORTHO05D009062 4.0e-17 92.8 181 37.6
Glyma.05G192800 Glycine max HOM05D007225 ORTHO05D009062 5.2e-17 92.4 251 32.3
THA.LOC104818429 Tarenaya hassleriana HOM05D007225 ORTHO05D009062 6.8e-17 92.0 247 32.4
Manes.12G157300 Manihot esculenta HOM05D007225 ORTHO05D009062 1.5e-16 90.9 226 31.4
EL10Ac1g01390 Beta vulgaris HOM05D007225 ORTHO05D009062 7.5e-16 88.6 310 29.4
Aqoxy5G02304 Aquilegia oxysepala HOM05D007225 ORTHO05D009062 1.7e-15 87.4 276 29.0
Os04g0693250 Oryza sativa ssp. japonica HOM05D007225 ORTHO05D009062 2.9e-15 86.7 257 32.3
Phvul.002G273400 Phaseolus vulgaris HOM05D007225 ORTHO05D009062 3.7e-15 86.3 252 31.0
Medtr8g093850 Medicago truncatula HOM05D007225 ORTHO05D009062 6.4e-15 85.5 172 33.7
Ah.02g121670 Amaranthus hybridus HOM05D007225 ORTHO05D009062 7.0e-14 82.0 216 30.6
MELO3C023228.2 Cucumis melo HOM05D007225 ORTHO05D009062 7.0e-14 82.0 162 32.7
Nn1g06303 Nelumbo nucifera HOM05D007225 ORTHO05D009062 2.7e-13 80.1 260 29.6
RcHm_v2.0_Chr4g0412711 Rosa chinensis HOM05D007225 ORTHO05D009062 2.7e-13 80.1 114 39.5
Nitab4.5_0010123g0010 Nicotiana tabacum HOM05D007225 ORTHO05D009062 1.0e-12 78.2 150 39.3
Aa31LG1G17910 Aethionema arabicum HOM05D007225 ORTHO05D009062 1.3e-12 77.8 227 31.7
Nitab4.5_0008206g0020 Nicotiana tabacum HOM05D007225 ORTHO05D009062 3.0e-12 76.6 149 37.6
VMungo0251G1761 Vigna mungo HOM05D007225 ORTHO05D009062 8.6e-12 75.1 233 30.9
SMO146G0397 Selaginella moellendorffii HOM05D007225 ORTHO05D009062 1.5e-11 74.3 270 30.7
Carub.0003s2889 Capsella rubella HOM05D007225 ORTHO05D009062 5.6e-11 72.4 83 48.2
AagrBONN_evm.TU.Sc2ySwM_117.1984 Anthoceros agrestis HOM05D007225 ORTHO05D009062 3.6e-10 69.7 242 28.1
Mapoly0095s0053 Marchantia polymorpha HOM05D007225 ORTHO05D009062 2.3e-09 67.0 216 31.0
Haze_25275 Corylus avellana HOM05D007225 ORTHO05D009062 3.4e-08 63.2 107 38.3
Glyma.08G000900 Glycine max HOM05D007225 ORTHO05D009062 9.8e-08 61.6 251 27.1
SHI11479 Sapria himalayana HOM05D000043 ORTHO05D002577 9.2e-06 55.1 96 37.5


User provided reference genes

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