Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_699.g19483 Utricularia gibba HOM05D005909 ORTHO05D007481 6.1e-208 727.2 366 100.0
MSTRG.13555 Avicennia marina HOM05D005909 ORTHO05D007481 1.2e-160 570.1 382 74.1
SalBow8G3248 Salvia bowleyana HOM05D005909 ORTHO05D007481 1.8e-159 566.2 382 73.0
SalBow8G0352 Salvia bowleyana HOM05D005909 ORTHO05D007481 1.9e-156 556.2 389 71.5
Hma1.2p1_1314F.1_g274990 Hydrangea macrophylla HOM05D005909 ORTHO05D007481 1.5e-153 546.6 383 71.8
QL01p010815 Quercus lobata HOM05D005909 ORTHO05D007481 1.9e-153 546.2 383 72.1
QL93p0145_0024 Quercus lobata HOM05D005909 ORTHO05D007481 1.9e-153 546.2 383 72.1
Nitab4.5_0002112g0090 Nicotiana tabacum HOM05D005909 ORTHO05D007481 5.6e-153 544.7 381 70.3
Hma1.2p1_2306F.1_g319360 Hydrangea macrophylla HOM05D005909 ORTHO05D007481 7.3e-153 544.3 383 71.8
Cc11_g09670 Coffea canephora HOM05D005909 ORTHO05D007481 8.1e-152 540.8 381 71.4
vmacro10599 Vaccinium macrocarpon HOM05D005909 ORTHO05D007481 1.8e-151 539.7 383 71.3
CSS0033004 Camellia sinensis var. sinensis HOM05D005909 ORTHO05D007481 3.1e-151 538.9 383 70.2
Actinidia14921 Actinidia chinensis HOM05D005909 ORTHO05D007481 8.9e-151 537.3 383 71.3
TAR622G1259 Trochodendron aralioides HOM05D005909 ORTHO05D007481 8.9e-151 537.3 381 69.6
CAN.G610.24 Capsicum annuum HOM05D005909 ORTHO05D007481 1.5e-150 536.6 381 69.0
Nn4g23953 Nelumbo nucifera HOM05D005909 ORTHO05D007481 2.6e-150 535.8 383 70.0
Solyc05g008870.3 Solanum lycopersicum HOM05D005909 ORTHO05D007481 2.6e-150 535.8 381 69.0
Sopen05g004630 Solanum pennellii HOM05D005909 ORTHO05D007481 2.6e-150 535.8 381 69.0
GSVIVG01011843001 Vitis vinifera HOM05D005909 ORTHO05D007481 5.8e-150 534.6 381 71.4
Nitab4.5_0000694g0120 Nicotiana tabacum HOM05D005909 ORTHO05D007481 7.5e-150 534.3 381 69.6
RcHm_v2.0_Chr4g0434411 Rosa chinensis HOM05D005909 ORTHO05D007481 9.8e-150 533.9 383 70.2
TWI79G1572 Tripterygium wilfordii HOM05D005909 ORTHO05D007481 1.3e-149 533.5 383 69.5
Potri.010G120200 Populus trichocarpa HOM05D005909 ORTHO05D007481 2.9e-149 532.3 382 69.4
Migut.E00369 Erythranthe guttata HOM05D005909 ORTHO05D007481 6.4e-149 531.2 425 66.8
Rhsim09G0103900 Rhododendron simsii HOM05D005909 ORTHO05D007481 6.4e-149 531.2 399 67.9
COL.COLO4_32148 Corchorus olitorius HOM05D005909 ORTHO05D007481 1.1e-148 530.4 381 69.0
Sabra10G0090400 Salix brachista HOM05D005909 ORTHO05D007481 1.1e-148 530.4 384 69.0
Lalb_Chr21g0308731 Lupinus albus HOM05D005909 ORTHO05D007481 7.1e-148 527.7 382 68.6
FvH4_4g26720 Fragaria vesca HOM05D005909 ORTHO05D007481 1.6e-147 526.6 380 70.3
Duzib248G1493 Durio zibethinus HOM05D005909 ORTHO05D007481 2.1e-147 526.2 389 68.4
Ca_06889_v3 Cicer arietinum L. HOM05D005909 ORTHO05D007481 3.5e-147 525.4 381 69.8
TPR.G4906 Trifolium pratense HOM05D005909 ORTHO05D007481 3.5e-147 525.4 377 70.6
Prupe.1G316800 Prunus persica HOM05D005909 ORTHO05D007481 4.6e-147 525.0 375 70.1
Atru.chr11.237 Acer truncatum HOM05D005909 ORTHO05D007481 1.7e-146 523.1 383 69.7
Lj5g0016761 Lotus japonicus HOM05D005909 ORTHO05D007481 5.1e-146 521.5 377 69.2
Gohir.D02G171900 Gossypium hirsutum HOM05D005909 ORTHO05D007481 8.6e-146 520.8 383 68.1
DCAR_007264 Daucus carota HOM05D005909 ORTHO05D007481 1.1e-145 520.4 384 68.0
Ciclev10015519m.g Citrus clementina HOM05D005909 ORTHO05D007481 5.6e-145 518.1 383 67.9
Lsat_1_v5_gn_3_62021 Lactuca sativa HOM05D005909 ORTHO05D007481 7.3e-145 517.7 381 68.8
Gohir.A03G148900 Gossypium hirsutum HOM05D005909 ORTHO05D007481 9.5e-145 517.3 390 67.4
Gorai.005G193400 Gossypium raimondii HOM05D005909 ORTHO05D007481 9.5e-145 517.3 389 67.1
PGR119G2457 Punica granatum HOM05D005909 ORTHO05D007481 1.2e-144 516.9 386 66.6
Medtr1g109590 Medicago truncatula HOM05D005909 ORTHO05D007481 4.7e-144 515.0 380 68.9
HanXRQChr15g0477421 Helianthus annuus HOM05D005909 ORTHO05D007481 6.2e-144 514.6 384 67.7
Cfa015837 Carpinus fangiana HOM05D005909 ORTHO05D007481 4.0e-143 511.9 383 69.5
CiPaw.05G242600 Carya illinoinensis HOM05D005909 ORTHO05D007481 5.2e-143 511.5 380 67.9
Glyma.20G120600 Glycine max HOM05D005909 ORTHO05D007481 8.9e-143 510.8 381 67.7
THA.LOC104823950 Tarenaya hassleriana HOM05D005909 ORTHO05D007481 3.4e-142 508.8 380 67.4
MD16G1037200 Malus domestica HOM05D005909 ORTHO05D007481 4.4e-142 508.4 383 67.6
Psat6g224680 Pisum sativum HOM05D005909 ORTHO05D007481 7.6e-142 507.7 381 68.2
PSO782G5715 Papaver somniferum HOM05D005909 ORTHO05D007481 9.9e-142 507.3 383 66.8
ECA246G0525 Erigeron canadensis HOM05D005909 ORTHO05D007481 1.3e-141 506.9 381 66.4
arahy.Tifrunner.gnm1.ann1.W577BF Arachis hypogaea HOM05D005909 ORTHO05D007481 2.2e-141 506.1 374 67.9
Aqoxy3G04056 Aquilegia oxysepala HOM05D005909 ORTHO05D007481 6.4e-141 504.6 382 66.2
arahy.Tifrunner.gnm1.ann1.IU6D7D Arachis hypogaea HOM05D005909 ORTHO05D007481 8.4e-141 504.2 377 67.6
Eucgr.G02238 Eucalyptus grandis HOM05D005909 ORTHO05D007481 8.4e-141 504.2 379 66.5
Lj6A753G52 Lonicera japonica HOM05D005909 ORTHO05D007481 1.9e-140 503.1 365 68.2
MBI16_g44832_MAGBIO Magnolia biondii HOM05D005909 ORTHO05D007481 2.4e-140 502.7 383 66.1
CARHR143760 Cardamine hirsuta HOM05D005909 ORTHO05D007481 5.4e-140 501.5 382 66.0
VMungo0720G1068 Vigna mungo HOM05D005909 ORTHO05D007481 5.4e-140 501.5 381 66.4
BcaC06g34207 Brassica carinata HOM05D005909 ORTHO05D007481 7.1e-140 501.1 378 66.1
MELO3C005340.2 Cucumis melo HOM05D005909 ORTHO05D007481 9.2e-140 500.7 383 66.1
CsaV3_5G028790 Cucumis sativus L. HOM05D005909 ORTHO05D007481 2.1e-139 499.6 383 65.5
Hund20744 Selenicereus undatus HOM05D005909 ORTHO05D007481 7.8e-139 497.7 382 63.9
EL10Ac6g14305 Beta vulgaris HOM05D005909 ORTHO05D007481 1.7e-138 496.5 375 64.3
C07p31670 Brassica napus HOM05D005909 ORTHO05D007481 1.7e-138 496.5 379 66.0
BolC7t43706H Brassica oleracea HOM05D005909 ORTHO05D007481 1.7e-138 496.5 379 66.0
AT2G01220 Arabidopsis thaliana HOM05D005909 ORTHO05D007481 2.3e-138 496.1 382 65.4
AL5G10170 Arabidopsis lyrata HOM05D005909 ORTHO05D007481 5.1e-138 495.0 382 65.4
Phvul.007G032000 Phaseolus vulgaris HOM05D005909 ORTHO05D007481 2.5e-137 492.7 381 65.9
Sp2g12680 Schrenkiella parvula HOM05D005909 ORTHO05D007481 2.5e-137 492.7 381 64.8
AUR62002812 Chenopodium quinoa HOM05D005909 ORTHO05D007481 5.6e-137 491.5 375 65.3
AUR62037268 Chenopodium quinoa HOM05D005909 ORTHO05D007481 5.6e-137 491.5 375 65.1
A06p44550 Brassica napus HOM05D005909 ORTHO05D007481 9.6e-137 490.7 383 64.2
Aa31LG2G8670 Aethionema arabicum HOM05D005909 ORTHO05D007481 2.8e-136 489.2 381 63.5
BraA06t27329Z Brassica rapa HOM05D005909 ORTHO05D007481 8.1e-136 487.6 388 63.9
Sed0017467 Sechium edule HOM05D005909 ORTHO05D007481 1.8e-135 486.5 383 64.5
Dinv16136 Davidia involucrata HOM05D005909 ORTHO05D007481 4.0e-135 485.3 363 70.2
Sc14g0007280 Simmondsia chinensis HOM05D005909 ORTHO05D007481 8.9e-135 484.2 384 64.3
CDE08G1136 Ceratophyllum demersum HOM05D005909 ORTHO05D007481 3.4e-134 482.3 374 64.2
Haze_00654 Corylus avellana HOM05D005909 ORTHO05D007481 9.9e-134 480.7 515 54.0
HPP92_024514 Vanilla planifolia HOM05D005909 ORTHO05D007481 1.3e-133 480.3 379 63.9
ATR0807G244 Amborella trichopoda HOM05D005909 ORTHO05D007481 2.2e-133 479.6 378 63.0
Zm00001eb360650 Zea mays HOM05D005909 ORTHO05D007481 1.3e-130 470.3 386 61.9
Peaxi162Scf00179g00534 Petunia axillaris HOM05D005909 ORTHO05D007481 8.7e-130 467.6 383 63.7
Ah.03g138370 Amaranthus hybridus HOM05D005909 ORTHO05D007481 1.1e-129 467.2 358 64.8
AL5G17030 Arabidopsis lyrata HOM05D005909 ORTHO05D007481 3.3e-129 465.7 383 61.9
Thhalv10000909m.g Eutrema salsugineum HOM05D005909 ORTHO05D007481 2.1e-128 463.0 382 62.6
CARHR148990 Cardamine hirsuta HOM05D005909 ORTHO05D007481 1.8e-127 459.9 382 60.7
Cpa.g.sc65.66 Carica papaya HOM05D005909 ORTHO05D007481 4.0e-127 458.8 382 60.7
Carub.0005s0605 Capsella rubella HOM05D005909 ORTHO05D007481 4.4e-126 455.3 379 61.7
PSO063G1187 Papaver somniferum HOM05D005909 ORTHO05D007481 7.6e-126 454.5 347 66.9
AT3G27610 Arabidopsis thaliana HOM05D005909 ORTHO05D007481 7.1e-124 448.0 383 60.8
ClCG01G005900 Citrullus lanatus HOM05D005909 ORTHO05D007481 2.7e-123 446.0 383 61.9
FAN07G1481 Fragaria x ananassa HOM05D005909 ORTHO05D007481 3.3e-121 439.1 351 64.4
Thecc.02G222000 Theobroma cacao HOM05D005909 ORTHO05D007481 2.2e-117 426.4 306 70.6
Manes.06G064900 Manihot esculenta HOM05D005909 ORTHO05D007481 4.3e-113 412.1 309 66.7
Oeu027686.1 Olea europaea HOM05D005909 ORTHO05D007481 2.8e-112 409.5 382 58.6
FAN12G0127 Fragaria x ananassa HOM05D005909 ORTHO05D007481 3.2e-108 396.0 290 68.3
AagrBONN_evm.TU.Sc2ySwM_362.1435 Anthoceros agrestis HOM05D004406 ORTHO05D005660 3.5e-107 392.5 378 52.9
Mapoly0100s0051 Marchantia polymorpha HOM05D005909 ORTHO05D007481 1.3e-106 390.6 382 54.7
Actinidia16683 Actinidia chinensis HOM05D005909 ORTHO05D007481 2.3e-106 389.8 308 67.2
FAN22G0620 Fragaria x ananassa HOM05D005909 ORTHO05D007481 5.7e-105 385.2 290 66.6
Dinv31596 Davidia involucrata HOM05D005909 ORTHO05D007481 1.3e-104 384.0 331 61.6
FAN12G0185 Fragaria x ananassa HOM05D005909 ORTHO05D007481 4.1e-103 379.0 306 63.4
Pp3c3_16750 Physcomitrium patens HOM05D005909 ORTHO05D007481 1.6e-99 367.1 382 50.3
FAN17G2694 Fragaria x ananassa HOM05D005909 ORTHO05D007481 1.3e-98 364.0 365 55.1
Pp3c12_7340 Physcomitrium patens HOM05D005909 ORTHO05D007481 6.7e-98 361.7 379 50.7
SMO196G0003 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 1.5e-97 360.5 399 48.1
TAR622G0977 Trochodendron aralioides HOM05D005909 ORTHO05D007481 1.3e-96 357.5 240 70.4
CANSAT01G0643 Cannabis sativa HOM05D005909 ORTHO05D007481 5.5e-92 342.0 262 63.0
SGA_v2.0_scaffold14G06904 Striga asiatica HOM05D005909 ORTHO05D007481 5.9e-86 322.0 234 71.8
Carub.0005s0021 Capsella rubella HOM05D005909 ORTHO05D007481 2.5e-84 316.6 266 60.5
Os01g0691500 Oryza sativa ssp. japonica HOM05D005909 ORTHO05D007481 5.3e-79 298.9 269 58.0
SGA_v2.0_scaffold14G06901 Striga asiatica HOM05D005909 ORTHO05D007481 5.4e-63 245.7 153 73.2
MCO06G004 Micromonas commoda HOM05D005909 ORTHO05D007481 2.2e-56 223.8 389 36.2
Carub.0005s0593 Capsella rubella HOM05D005909 ORTHO05D007481 1.6e-54 217.6 224 54.9
PGSC0003DMG401030529 Solanum tuberosum HOM05D005909 ORTHO05D007481 3.6e-51 206.5 135 78.5
PRCOL_00006609 Prasinoderma coloniale HOM05D005909 ORTHO05D007481 4.4e-49 199.5 427 34.2
Cre06.g278116 Chlamydomonas reinhardtii HOM05D005909 ORTHO05D007481 7.5e-49 198.7 423 35.0
Oeu027687.1 Olea europaea HOM05D005909 ORTHO05D007481 4.1e-47 193.0 114 83.3
SEGI_08541 Sequoiadendron giganteum HOM05D005909 ORTHO05D007481 8.9e-42 175.3 136 63.2
SEGI_29486 Sequoiadendron giganteum HOM05D005909 ORTHO05D007481 3.6e-35 153.3 107 64.5
CBR_g39317 Chara braunii HOM05D005909 ORTHO05D007481 5.1e-21 106.3 180 37.8
CiPaw.05G241800 Carya illinoinensis HOM05D005909 ORTHO05D007481 1.9e-20 104.4 65 75.4
arahy.Tifrunner.gnm1.ann1.XNS652 Arachis hypogaea HOM05D005909 ORTHO05D007481 8.9e-18 95.5 128 46.9
BcaC06g31323 Brassica carinata HOM05D005909 ORTHO05D007481 1.3e-16 91.7 68 67.6
CBR_g39316 Chara braunii HOM05D000019 ORTHO05D000002 8.7e-13 79.0 70 52.9
Gohir.D12G121400 Gossypium hirsutum HOM05D005909 ORTHO05D046826 3.3e-12 77.0 60 66.7
SMO163G0092 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 4.3e-12 76.6 142 37.3
SEGI_32432 Sequoiadendron giganteum HOM05D005909 ORTHO05D007481 1.6e-11 74.7 69 52.2
SMO265G0018 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 5.3e-10 69.7 136 33.1
TPR.G28941 Trifolium pratense HOM05D000324 ORTHO05D004875 9.0e-10 68.9 66 62.1
Gorai.008G132300 Gossypium raimondii HOM05D005909 ORTHO05D046826 2.6e-09 67.4 36 88.9


User provided reference genes

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