Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_699.g19464 Utricularia gibba HOM05D005420 ORTHO05D006524 3.6e-106 388.3 199 100.0
unitig_27.g25143 Utricularia gibba HOM05D005420 ORTHO05D006524 4.3e-99 364.8 198 94.4
MSTRG.24552 Avicennia marina HOM05D005420 ORTHO05D006524 2.8e-98 362.1 193 94.8
SalBow3G4646 Salvia bowleyana HOM05D005420 ORTHO05D006524 5.3e-97 357.8 193 92.7
Cc03_g15990 Coffea canephora HOM05D005420 ORTHO05D006524 3.4e-96 355.1 193 92.2
Nitab4.5_0000013g0040 Nicotiana tabacum HOM05D005420 ORTHO05D006524 2.9e-95 352.1 193 91.2
Nitab4.5_0008205g0010 Nicotiana tabacum HOM05D005420 ORTHO05D006524 2.9e-95 352.1 193 91.2
Dinv33245 Davidia involucrata HOM05D005420 ORTHO05D006524 1.1e-94 350.1 195 90.8
CSS0022736 Camellia sinensis var. sinensis HOM05D005420 ORTHO05D006524 1.4e-94 349.7 193 90.2
Migut.G00921 Erythranthe guttata HOM05D005420 ORTHO05D006524 1.9e-94 349.4 193 90.7
CSS0017727 Camellia sinensis var. sinensis HOM05D005420 ORTHO05D006524 3.2e-94 348.6 193 89.6
Glyma.17G000800 Glycine max HOM05D005420 ORTHO05D006524 3.2e-94 348.6 193 90.2
HanXRQChr11g0343501 Helianthus annuus HOM05D005420 ORTHO05D006524 4.2e-94 348.2 193 90.7
Peaxi162Scf01205g00032 Petunia axillaris HOM05D005420 ORTHO05D006524 4.2e-94 348.2 193 90.7
Sed0010932 Sechium edule HOM05D005420 ORTHO05D006524 4.2e-94 348.2 193 90.2
arahy.Tifrunner.gnm1.ann1.D6NWCJ Arachis hypogaea HOM05D005420 ORTHO05D006524 7.1e-94 347.4 193 90.2
arahy.Tifrunner.gnm1.ann1.EMGW5K Arachis hypogaea HOM05D005420 ORTHO05D006524 7.1e-94 347.4 193 90.2
ECA248G1232 Erigeron canadensis HOM05D005420 ORTHO05D006524 7.1e-94 347.4 193 90.2
Solyc08g015620.3 Solanum lycopersicum HOM05D005420 ORTHO05D006524 7.1e-94 347.4 193 89.6
Sopen08g005610 Solanum pennellii HOM05D005420 ORTHO05D006524 7.1e-94 347.4 193 89.6
Glyma.07G273700 Glycine max HOM05D005420 ORTHO05D006524 9.3e-94 347.1 193 89.6
Eucgr.H01455 Eucalyptus grandis HOM05D005420 ORTHO05D006524 1.2e-93 346.7 193 90.2
ClCG09G014850 Citrullus lanatus HOM05D005420 ORTHO05D006524 1.6e-93 346.3 193 89.6
CANSAT56G1087 Cannabis sativa HOM05D005420 ORTHO05D006524 2.7e-93 345.5 195 89.7
CsaV3_7G022350 Cucumis sativus L. HOM05D005420 ORTHO05D006524 3.5e-93 345.1 193 89.1
Cfa008513 Carpinus fangiana HOM05D005420 ORTHO05D006524 6.0e-93 344.4 193 89.6
Ciclev10012405m.g Citrus clementina HOM05D005420 ORTHO05D006524 6.0e-93 344.4 193 88.6
VMungo1215G3385 Vigna mungo HOM05D005420 ORTHO05D006524 6.0e-93 344.4 193 88.1
CiPaw.01G201600 Carya illinoinensis HOM05D005420 ORTHO05D006524 7.9e-93 344.0 193 89.1
DCAR_005460 Daucus carota HOM05D005420 ORTHO05D006524 7.9e-93 344.0 195 89.7
Phvul.003G074600 Phaseolus vulgaris HOM05D005420 ORTHO05D006524 7.9e-93 344.0 193 89.1
RcHm_v2.0_Chr2g0084451 Rosa chinensis HOM05D005420 ORTHO05D006524 7.9e-93 344.0 193 88.6
CDE09G0694 Ceratophyllum demersum HOM05D005420 ORTHO05D006524 1.0e-92 343.6 193 87.6
HanXRQChr01g0023651 Helianthus annuus HOM05D005420 ORTHO05D006524 1.3e-92 343.2 193 88.6
Aqoxy1G01859 Aquilegia oxysepala HOM05D005420 ORTHO05D006524 1.7e-92 342.8 195 88.7
FvH4_1g00160 Fragaria vesca HOM05D005420 ORTHO05D006524 1.7e-92 342.8 193 88.1
FAN28G0609 Fragaria x ananassa HOM05D005420 ORTHO05D006524 1.7e-92 342.8 193 88.1
Lj6C285T2 Lonicera japonica HOM05D005420 ORTHO05D006524 1.7e-92 342.8 195 89.2
TAR636G0539 Trochodendron aralioides HOM05D005420 ORTHO05D006524 1.7e-92 342.8 193 88.1
Atru.chr12.1712 Acer truncatum HOM05D005420 ORTHO05D006524 2.3e-92 342.4 193 89.1
MBI07_g10354_MAGBIO Magnolia biondii HOM05D005420 ORTHO05D006524 3.0e-92 342.0 193 87.6
CiPaw.02G124600 Carya illinoinensis HOM05D005420 ORTHO05D006524 3.9e-92 341.7 193 89.1
Prupe.7G269700 Prunus persica HOM05D005420 ORTHO05D006524 3.9e-92 341.7 193 88.1
FAN26G3138 Fragaria x ananassa HOM05D005420 ORTHO05D006524 6.6e-92 340.9 193 87.6
Potri.013G084300 Populus trichocarpa HOM05D005420 ORTHO05D006524 6.6e-92 340.9 193 87.6
PGR119G0486 Punica granatum HOM05D005420 ORTHO05D006524 6.6e-92 340.9 193 88.6
GSVIVG01038249001 Vitis vinifera HOM05D005420 ORTHO05D006524 6.6e-92 340.9 192 88.5
Lj4g0016379 Lotus japonicus HOM05D005420 ORTHO05D006524 8.7e-92 340.5 193 88.6
Sabra13G0078900 Salix brachista HOM05D005420 ORTHO05D006524 8.7e-92 340.5 193 88.1
MD00G1087500 Malus domestica HOM05D005420 ORTHO05D006524 1.1e-91 340.1 193 88.1
QL10p064332 Quercus lobata HOM05D005420 ORTHO05D006524 1.9e-91 339.3 192 87.5
TWI36G0345 Tripterygium wilfordii HOM05D005420 ORTHO05D006524 2.5e-91 339.0 193 87.6
MD15G1143300 Malus domestica HOM05D005420 ORTHO05D006524 3.3e-91 338.6 193 88.1
THA.LOC104802345 Tarenaya hassleriana HOM05D005420 ORTHO05D006524 3.3e-91 338.6 192 88.5
FAN23G1410 Fragaria x ananassa HOM05D005420 ORTHO05D006524 7.4e-91 337.4 193 88.1
Cpa.g.sc151.6 Carica papaya HOM05D005420 ORTHO05D006524 9.6e-91 337.0 193 88.1
Ah.07g203200 Amaranthus hybridus HOM05D005420 ORTHO05D006524 1.3e-90 336.7 193 86.0
Lsat_1_v5_gn_1_76981 Lactuca sativa HOM05D005420 ORTHO05D006524 1.3e-90 336.7 185 90.8
Manes.12G003300 Manihot esculenta HOM05D005420 ORTHO05D006524 1.6e-90 336.3 193 87.0
Duzib177G0155 Durio zibethinus HOM05D005420 ORTHO05D006524 3.6e-90 335.1 192 88.0
Thecc.05G186000 Theobroma cacao HOM05D005420 ORTHO05D006524 3.6e-90 335.1 192 88.0
TAR365G1242 Trochodendron aralioides HOM05D005420 ORTHO05D006524 3.6e-90 335.1 193 86.0
AUR62002482 Chenopodium quinoa HOM05D005420 ORTHO05D006524 4.8e-90 334.7 193 86.0
AUR62023710 Chenopodium quinoa HOM05D005420 ORTHO05D006524 4.8e-90 334.7 193 86.0
EL10Ac3g06165 Beta vulgaris HOM05D005420 ORTHO05D006524 6.2e-90 334.3 193 85.0
BcaC02g12350 Brassica carinata HOM05D005420 ORTHO05D006524 8.1e-90 334.0 185 88.6
C04p04880 Brassica napus HOM05D005420 ORTHO05D006524 8.1e-90 334.0 185 88.6
BolC4t22118H Brassica oleracea HOM05D005420 ORTHO05D006524 8.1e-90 334.0 185 88.6
A05p04100 Brassica napus HOM05D005420 ORTHO05D006524 1.8e-89 332.8 185 88.1
BraA05t19397Z Brassica rapa HOM05D005420 ORTHO05D006524 1.8e-89 332.8 185 88.1
SGA_v2.0_scaffold12G06218 Striga asiatica HOM05D005420 ORTHO05D006524 1.8e-89 332.8 199 85.9
THA.LOC104804283 Tarenaya hassleriana HOM05D005420 ORTHO05D006524 2.4e-89 332.4 192 87.5
AL4G42820 Arabidopsis lyrata HOM05D005420 ORTHO05D006524 3.1e-89 332.0 192 85.4
AT2G43945 Arabidopsis thaliana HOM05D005420 ORTHO05D006524 3.1e-89 332.0 192 85.4
Carub.0004s2651 Capsella rubella HOM05D005420 ORTHO05D006524 3.1e-89 332.0 192 85.4
Thhalv10001571m.g Eutrema salsugineum HOM05D005420 ORTHO05D006524 3.1e-89 332.0 192 85.4
A03p24600 Brassica napus HOM05D005420 ORTHO05D006524 4.0e-89 331.6 192 84.9
CARHR139120 Cardamine hirsuta HOM05D005420 ORTHO05D006524 5.3e-89 331.3 192 85.4
Rhsim09G0003700 Rhododendron simsii HOM05D005420 ORTHO05D006524 5.3e-89 331.3 198 86.4
Actinidia34566 Actinidia chinensis HOM05D005420 ORTHO05D006524 6.9e-89 330.9 193 85.5
Aa31LG1G25640 Aethionema arabicum HOM05D005420 ORTHO05D006524 6.9e-89 330.9 192 85.9
BcaB02g08884 Brassica carinata HOM05D005420 ORTHO05D006524 9.0e-89 330.5 185 87.0
C03p29330 Brassica napus HOM05D005420 ORTHO05D006524 9.0e-89 330.5 192 84.9
BolC3t15280H Brassica oleracea HOM05D005420 ORTHO05D006524 9.0e-89 330.5 192 84.9
Duzib128G1088 Durio zibethinus HOM05D005420 ORTHO05D006524 1.5e-88 329.7 192 86.5
BcaB06g29350 Brassica carinata HOM05D005420 ORTHO05D006524 2.6e-88 328.9 185 87.6
Gohir.A02G106300 Gossypium hirsutum HOM05D005420 ORTHO05D006524 3.4e-88 328.6 192 86.5
Gohir.D03G071700 Gossypium hirsutum HOM05D005420 ORTHO05D006524 3.4e-88 328.6 192 86.5
Gorai.003G088300 Gossypium raimondii HOM05D005420 ORTHO05D006524 3.4e-88 328.6 192 86.5
GSVIVG01026140001 Vitis vinifera HOM05D005420 ORTHO05D006524 3.4e-88 328.6 193 83.9
PSO675G2924 Papaver somniferum HOM05D005420 ORTHO05D006524 4.5e-88 328.2 193 83.4
PSO732G0217 Papaver somniferum HOM05D005420 ORTHO05D006524 4.5e-88 328.2 193 83.4
Aa31LG10G14100 Aethionema arabicum HOM05D005420 ORTHO05D006524 5.8e-88 327.8 192 85.4
vmacro00721 Vaccinium macrocarpon HOM05D005420 ORTHO05D006524 5.8e-88 327.8 201 85.1
BraA03t11665Z Brassica rapa HOM05D005420 ORTHO05D006524 7.6e-88 327.4 192 83.9
Carub.0005s2660 Capsella rubella HOM05D005420 ORTHO05D006524 7.6e-88 327.4 195 83.1
Psat4g001320 Pisum sativum HOM05D005420 ORTHO05D006524 7.6e-88 327.4 193 86.0
HPP92_024700 Vanilla planifolia HOM05D005420 ORTHO05D006524 7.6e-88 327.4 198 80.8
Actinidia18399 Actinidia chinensis HOM05D005420 ORTHO05D006524 1.7e-87 326.2 192 84.9
ATR0743G098 Amborella trichopoda HOM05D005420 ORTHO05D006524 4.9e-87 324.7 193 82.9
AT3G59870 Arabidopsis thaliana HOM05D005420 ORTHO05D006524 1.4e-86 323.2 200 80.5
Os01g0338600 Oryza sativa ssp. japonica HOM05D005420 ORTHO05D006524 2.1e-85 319.3 198 80.8
Zm00001eb159810 Zea mays HOM05D005420 ORTHO05D006524 2.7e-85 318.9 197 81.7
TWI36G1305 Tripterygium wilfordii HOM05D005420 ORTHO05D006524 3.0e-84 315.5 180 87.2
SMO367G0538 Selaginella moellendorffii HOM05D005420 ORTHO05D006524 2.8e-82 308.9 184 83.2
Sp4g26040 Schrenkiella parvula HOM05D005420 ORTHO05D006524 3.7e-82 308.5 179 84.9
SEGI_26827 Sequoiadendron giganteum HOM05D005420 ORTHO05D006524 3.7e-82 308.5 184 85.3
Pp3c8_21410 Physcomitrium patens HOM05D005420 ORTHO05D006524 4.8e-82 308.1 184 82.1
Pp3c24_16460 Physcomitrium patens HOM05D005420 ORTHO05D006524 5.3e-81 304.7 184 82.1
Mapoly0136s0029 Marchantia polymorpha HOM05D005420 ORTHO05D006524 3.4e-80 302.0 185 81.6
Haze_11131 Corylus avellana HOM05D005420 ORTHO05D006524 2.7e-77 292.4 155 95.5
Migut.N03031 Erythranthe guttata HOM05D005420 ORTHO05D006524 3.0e-76 288.9 195 78.5
Manes.13G003200 Manihot esculenta HOM05D005420 ORTHO05D006524 7.4e-75 284.3 157 91.7
TPR.G6015 Trifolium pratense HOM05D005420 ORTHO05D006524 9.6e-75 283.9 173 85.0
Nn7g37463 Nelumbo nucifera HOM05D005420 ORTHO05D006524 1.5e-72 276.6 161 85.1
Dinv24753 Davidia involucrata HOM05D005420 ORTHO05D006524 1.6e-69 266.5 148 90.5
Nn3g18334 Nelumbo nucifera HOM05D005420 ORTHO05D006524 1.6e-66 256.5 148 85.8
Medtr4g134910 Medicago truncatula HOM05D005420 ORTHO05D006524 1.1e-65 253.8 147 86.4
Hund22588 Selenicereus undatus HOM05D005420 ORTHO05D006524 4.1e-65 251.9 148 85.1
Sc25g0003040 Simmondsia chinensis HOM05D005420 ORTHO05D006524 5.3e-65 251.5 148 84.5
Lalb_Chr18g0044961 Lupinus albus HOM05D005420 ORTHO05D006524 9.1e-65 250.8 134 94.8
MCO05G102 Micromonas commoda HOM05D005420 ORTHO05D006524 1.2e-64 250.4 160 76.2
Cre16.g676450 Chlamydomonas reinhardtii HOM05D005420 ORTHO05D006524 5.0e-63 245.0 192 66.7
PRCOL_00006877 Prasinoderma coloniale HOM05D005420 ORTHO05D006524 1.8e-60 236.5 160 71.9
Atru.chr12.1711 Acer truncatum HOM05D005420 ORTHO05D006524 4.4e-59 231.9 191 68.6
Oeu022910.1 Olea europaea HOM05D005420 ORTHO05D006524 2.8e-58 229.2 129 89.9
Zm00001eb356860 Zea mays HOM05D005420 ORTHO05D006524 9.1e-57 224.2 190 64.2
Ca_13540_v3 Cicer arietinum L. HOM05D005420 ORTHO05D006524 1.1e-51 207.2 172 66.3
AagrBONN_evm.TU.Sc2ySwM_228.1821 Anthoceros agrestis HOM05D005420 ORTHO05D006524 2.7e-45 186.0 135 69.6
Sed0016168 Sechium edule HOM05D005420 ORTHO05D006524 5.0e-39 165.2 90 93.3
MBI07_g42072_MAGBIO Magnolia biondii HOM05D005420 ORTHO05D006524 7.2e-38 161.4 89 89.9
CDE02G3676 Ceratophyllum demersum HOM05D005420 ORTHO05D006524 1.1e-33 147.5 154 55.2
Pp3c20_1670 Physcomitrium patens HOM05D005420 ORTHO05D006524 1.6e-32 143.7 157 50.3
Eucgr.L00810 Eucalyptus grandis HOM05D005420 ORTHO05D006524 2.8e-29 132.9 78 82.1
Eucgr.H01440 Eucalyptus grandis HOM05D005420 ORTHO05D006524 3.7e-26 122.5 77 79.2
Lsat_1_v5_gn_1_75001 Lactuca sativa HOM05D005420 ORTHO05D006524 5.9e-24 115.2 78 71.8
Lsat_1_v5_gn_5_160100 Lactuca sativa HOM05D005420 ORTHO05D006524 2.5e-22 109.8 78 67.9
MSTRG.9265 Avicennia marina HOM05D005420 ORTHO05D006524 4.7e-21 105.5 78 70.5
CBR_g10867 Chara braunii HOM05D005420 ORTHO05D006524 4.6e-16 89.0 58 74.1
Sed0003231 Sechium edule HOM05D005420 ORTHO05D006524 3.5e-08 62.8 39 71.8
Lalb_Chr18g0044971 Lupinus albus HOM05D005420 ORTHO05D006524 7.3e-06 55.1 42 57.1


User provided reference genes

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