Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_699.g19440 Utricularia gibba HOM05D018425 ORTHO05D017180 4.2e-95 351.3 169 100.0
MSTRG.19924 Avicennia marina HOM05D018425 ORTHO05D017180 6.6e-08 61.6 79 43.0
Gorai.004G100800 Gossypium raimondii HOM05D000333 ORTHO05D000190 1.5e-07 60.5 66 48.5
Migut.J01863 Erythranthe guttata HOM05D018425 ORTHO05D017180 1.9e-07 60.1 65 44.6
SGA_v2.0_scaffold69G23045 Striga asiatica HOM05D018425 ORTHO05D017180 3.3e-07 59.3 146 33.6
Gohir.D08G095000 Gossypium hirsutum HOM05D000333 ORTHO05D000190 4.3e-07 58.9 66 47.0
Lj1g0011862 Lotus japonicus HOM05D000333 ORTHO05D000190 4.3e-07 58.9 53 52.8
Lalb_Chr05g0217241 Lupinus albus HOM05D001250 ORTHO05D000627 5.6e-07 58.5 45 53.3
SalBow6G0218 Salvia bowleyana HOM05D018425 ORTHO05D017180 5.6e-07 58.5 52 50.0
Duzib150G1611 Durio zibethinus HOM05D000333 ORTHO05D000190 9.5e-07 57.8 117 32.5
CSS0048317 Camellia sinensis var. sinensis HOM05D000333 ORTHO05D000190 1.2e-06 57.4 47 55.3
CiPaw.13G017200 Carya illinoinensis HOM05D000333 ORTHO05D000190 1.2e-06 57.4 72 44.4
Hma1.2p1_0233F.1_g098180 Hydrangea macrophylla HOM05D000333 ORTHO05D000190 1.2e-06 57.4 179 30.2
SGA_v2.0_scaffold105G30512 Striga asiatica HOM05D018425 ORTHO05D017180 1.2e-06 57.4 46 50.0
Phvul.002G075900 Phaseolus vulgaris HOM05D001250 ORTHO05D000627 1.6e-06 57.0 48 47.9
VMungo1383G0711 Vigna mungo HOM05D000333 ORTHO05D000190 1.6e-06 57.0 114 33.3
Gohir.A08G090800 Gossypium hirsutum HOM05D000333 ORTHO05D000190 2.8e-06 56.2 61 49.2
Gohir.A13G110300 Gossypium hirsutum HOM05D000333 ORTHO05D000190 2.8e-06 56.2 165 28.5
Nitab4.5_0010523g0020 Nicotiana tabacum HOM05D001250 ORTHO05D000627 2.8e-06 56.2 59 40.7
COL.COLO4_36832 Corchorus olitorius HOM05D000333 ORTHO05D000190 3.6e-06 55.8 61 47.5
MD07G1042100 Malus domestica HOM05D000333 ORTHO05D000190 3.6e-06 55.8 44 59.1
Nitab4.5_0000034g0090 Nicotiana tabacum HOM05D001250 ORTHO05D000627 3.6e-06 55.8 61 41.0
Nitab4.5_0000257g0090 Nicotiana tabacum HOM05D001250 ORTHO05D000627 3.6e-06 55.8 59 40.7
Nitab4.5_0006492g0010 Nicotiana tabacum HOM05D001250 ORTHO05D000627 3.6e-06 55.8 59 42.4
Phvul.003G147100 Phaseolus vulgaris HOM05D000333 ORTHO05D000190 3.6e-06 55.8 140 30.7
Atru.chr5.2446 Acer truncatum HOM05D000333 ORTHO05D000190 6.2e-06 55.1 38 63.2
CANSAT78G0679 Cannabis sativa HOM05D000333 ORTHO05D000190 6.2e-06 55.1 37 64.9
Ciclev10032466m.g Citrus clementina HOM05D001250 ORTHO05D000627 6.2e-06 55.1 53 43.4
DCAR_026559 Daucus carota HOM05D001250 ORTHO05D000627 6.2e-06 55.1 36 58.3
Gorai.008G158200 Gossypium raimondii HOM05D001250 ORTHO05D000627 6.2e-06 55.1 41 53.7
Nitab4.5_0001440g0010 Nicotiana tabacum HOM05D003047 ORTHO05D000627 6.2e-06 55.1 61 44.3
Nitab4.5_0018752g0010 Nicotiana tabacum HOM05D000333 ORTHO05D000190 6.2e-06 55.1 49 51.0
Rhsim01G0123100 Rhododendron simsii HOM05D000333 ORTHO05D000190 6.2e-06 55.1 51 51.0
TAR622G0054 Trochodendron aralioides HOM05D001250 ORTHO05D000627 6.2e-06 55.1 70 41.4
Haze_02968 Corylus avellana HOM05D000333 ORTHO05D000190 8.1e-06 54.7 89 38.2
Migut.J01452 Erythranthe guttata HOM05D000333 ORTHO05D000190 8.1e-06 54.7 40 62.5
Gohir.D08G033700 Gossypium hirsutum HOM05D000333 ORTHO05D000190 8.1e-06 54.7 47 55.3
Lj2g0019425 Lotus japonicus HOM05D001250 ORTHO05D000627 8.1e-06 54.7 45 48.9
Manes.15G006800 Manihot esculenta HOM05D001250 ORTHO05D000627 8.1e-06 54.7 32 71.9
PGR102G2067 Punica granatum HOM05D000333 ORTHO05D000190 8.1e-06 54.7 67 46.3
Sed0027507 Sechium edule HOM05D001250 ORTHO05D000627 8.1e-06 54.7 32 65.6
TPR.G13949 Trifolium pratense HOM05D001250 ORTHO05D000627 8.1e-06 54.7 44 50.0


User provided reference genes

Program Settings