Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_699.g19404 Utricularia gibba HOM05D005029 ORTHO05D006052 6.5e-157 557.4 285 100.0
unitig_27.g24759 Utricularia gibba HOM05D005029 ORTHO05D006052 2.4e-103 379.4 286 73.8
MSTRG.26542 Avicennia marina HOM05D005029 ORTHO05D006052 9.6e-68 261.2 296 51.4
SGA_v2.0_scaffold31G12759 Striga asiatica HOM05D005029 ORTHO05D006052 7.6e-65 251.5 294 52.4
Gohir.D13G213100 Gossypium hirsutum HOM05D005029 ORTHO05D006052 3.0e-61 239.6 283 50.2
Gorai.013G243400 Gossypium raimondii HOM05D005029 ORTHO05D006052 3.0e-61 239.6 283 50.2
Nitab4.5_0000617g0020 Nicotiana tabacum HOM05D005029 ORTHO05D006052 6.2e-59 231.9 304 49.3
Dinv41171 Davidia involucrata HOM05D005029 ORTHO05D006052 8.1e-59 231.5 283 50.2
Gohir.A13G208700 Gossypium hirsutum HOM05D005029 ORTHO05D006052 1.4e-58 230.7 283 49.8
Duzib170G0048 Durio zibethinus HOM05D005029 ORTHO05D006052 1.8e-58 230.3 294 48.0
Duzib150G1033 Durio zibethinus HOM05D005029 ORTHO05D006052 5.3e-58 228.8 291 49.5
Thecc.09G185600 Theobroma cacao HOM05D005029 ORTHO05D006052 1.2e-57 227.6 292 47.9
Cc00_g10760 Coffea canephora HOM05D005029 ORTHO05D006052 2.0e-57 226.9 277 50.5
COL.COLO4_08419 Corchorus olitorius HOM05D005029 ORTHO05D006052 5.8e-57 225.3 295 49.2
CiPaw.08G032800 Carya illinoinensis HOM05D005029 ORTHO05D006052 1.9e-55 220.3 288 48.6
Cfa013448 Carpinus fangiana HOM05D005029 ORTHO05D006052 3.2e-55 219.5 293 50.5
Haze_22015 Corylus avellana HOM05D005029 ORTHO05D006052 4.2e-55 219.2 293 50.2
Actinidia01279 Actinidia chinensis HOM05D005029 ORTHO05D006052 7.1e-55 218.4 281 49.1
Glyma.15G165600 Glycine max HOM05D005029 ORTHO05D006052 7.1e-55 218.4 259 51.4
Cpa.g.c27842.2 Carica papaya HOM05D005029 ORTHO05D006052 1.2e-54 217.6 310 46.5
DCAR_030818 Daucus carota HOM05D005029 ORTHO05D006052 6.0e-54 215.3 265 48.7
Glyma.09G059300 Glycine max HOM05D005029 ORTHO05D006052 7.9e-54 214.9 302 47.7
Manes.06G020200 Manihot esculenta HOM05D005029 ORTHO05D006052 1.0e-53 214.5 257 50.2
Sp7g27770 Schrenkiella parvula HOM05D005029 ORTHO05D006052 2.3e-53 213.4 247 49.8
CiPaw.07G196600 Carya illinoinensis HOM05D005029 ORTHO05D006052 3.9e-53 212.6 283 48.8
Oeu034799.1 Olea europaea HOM05D005029 ORTHO05D006052 1.5e-52 210.7 252 48.8
Peaxi162Scf01600g00016 Petunia axillaris HOM05D005029 ORTHO05D006052 2.5e-52 209.9 292 46.9
Migut.L01885 Erythranthe guttata HOM05D005029 ORTHO05D006052 4.3e-52 209.1 289 48.1
Psat1g145480 Pisum sativum HOM05D005029 ORTHO05D006052 4.3e-52 209.1 249 51.0
Thhalv10025919m.g Eutrema salsugineum HOM05D005029 ORTHO05D006052 5.6e-52 208.8 280 47.1
Solyc07g008780.3 Solanum lycopersicum HOM05D005029 ORTHO05D006052 2.8e-51 206.5 289 45.3
PGSC0003DMG400028729 Solanum tuberosum HOM05D005029 ORTHO05D006052 2.8e-51 206.5 289 45.3
Eucgr.C00120 Eucalyptus grandis HOM05D005029 ORTHO05D006052 3.7e-51 206.1 287 47.4
Phvul.009G236500 Phaseolus vulgaris HOM05D005029 ORTHO05D006052 6.2e-51 205.3 297 47.1
Carub.0007s1068 Capsella rubella HOM05D005029 ORTHO05D006052 8.2e-51 204.9 280 47.1
Nitab4.5_0008862g0020 Nicotiana tabacum HOM05D005029 ORTHO05D006052 8.2e-51 204.9 289 47.1
Medtr2g037940 Medicago truncatula HOM05D005029 ORTHO05D006052 1.4e-50 204.1 302 45.4
TWI32G0396 Tripterygium wilfordii HOM05D005029 ORTHO05D006052 1.4e-50 204.1 258 47.7
Aqoxy7G02787 Aquilegia oxysepala HOM05D005029 ORTHO05D006052 1.8e-50 203.8 257 49.8
RcHm_v2.0_Chr4g0399711 Rosa chinensis HOM05D005029 ORTHO05D006052 3.1e-50 203.0 255 47.1
VMungo1309G1415 Vigna mungo HOM05D005029 ORTHO05D006052 3.1e-50 203.0 291 46.0
Sopen07g004720 Solanum pennellii HOM05D005029 ORTHO05D006052 4.0e-50 202.6 281 45.9
AL7G22280 Arabidopsis lyrata HOM05D005029 ORTHO05D006052 5.3e-50 202.2 278 46.0
AUR62021347 Chenopodium quinoa HOM05D005029 ORTHO05D006052 5.3e-50 202.2 298 42.6
MD16G1249500 Malus domestica HOM05D005029 ORTHO05D006052 5.3e-50 202.2 298 46.3
Ca_02102_v3 Cicer arietinum L. HOM05D005029 ORTHO05D006052 6.9e-50 201.8 303 46.2
EL10Ac8g18332 Beta vulgaris HOM05D005029 ORTHO05D006052 9.0e-50 201.4 253 47.4
BolC3t21207H Brassica oleracea HOM05D005029 ORTHO05D006052 9.0e-50 201.4 281 46.3
Lj6g0016757 Lotus japonicus HOM05D005029 ORTHO05D006052 1.5e-49 200.7 289 46.7
FAN07G2409 Fragaria x ananassa HOM05D005029 ORTHO05D006052 2.0e-49 200.3 279 44.8
FAN12G1304 Fragaria x ananassa HOM05D005029 ORTHO05D006052 4.5e-49 199.1 283 44.2
FvH4_4g07340 Fragaria vesca HOM05D005029 ORTHO05D006052 5.8e-49 198.7 285 43.9
Potri.006G075900 Populus trichocarpa HOM05D005029 ORTHO05D006052 1.3e-48 197.6 300 45.3
Prupe.1G076300 Prunus persica HOM05D005029 ORTHO05D006052 1.3e-48 197.6 300 44.7
HanXRQChr13g0426591 Helianthus annuus HOM05D005029 ORTHO05D006052 1.7e-48 197.2 255 46.7
Nn7g36649 Nelumbo nucifera HOM05D005029 ORTHO05D006052 1.7e-48 197.2 289 48.1
THA.LOC104803957 Tarenaya hassleriana HOM05D005029 ORTHO05D006052 1.7e-48 197.2 298 45.0
THA.LOC104803983 Tarenaya hassleriana HOM05D005029 ORTHO05D006052 1.7e-48 197.2 298 45.0
TWI34G0612 Tripterygium wilfordii HOM05D005029 ORTHO05D006052 1.7e-48 197.2 298 44.6
BcaNung00506 Brassica carinata HOM05D005029 ORTHO05D006052 3.8e-48 196.1 241 51.0
Lsat_1_v5_gn_3_137280 Lactuca sativa HOM05D005029 ORTHO05D006052 4.9e-48 195.7 267 46.4
TAR626G1810 Trochodendron aralioides HOM05D005029 ORTHO05D006052 6.5e-48 195.3 287 45.3
CANSAT11G1104 Cannabis sativa HOM05D005029 ORTHO05D006052 8.4e-48 194.9 294 44.2
FAN17G0071 Fragaria x ananassa HOM05D005029 ORTHO05D006052 1.4e-47 194.1 300 42.7
AUR62033261 Chenopodium quinoa HOM05D005029 ORTHO05D006052 2.5e-47 193.4 299 43.8
AT4G29960 Arabidopsis thaliana HOM05D005029 ORTHO05D006052 3.2e-47 193.0 284 46.5
CARHR237880 Cardamine hirsuta HOM05D005029 ORTHO05D006052 7.1e-47 191.8 288 44.1
TAR383G0036 Trochodendron aralioides HOM05D005029 ORTHO05D006052 9.3e-47 191.4 295 45.8
BcaC01g01206 Brassica carinata HOM05D005029 ORTHO05D006052 2.1e-46 190.3 289 43.9
FAN22G0020 Fragaria x ananassa HOM05D005029 ORTHO05D006052 2.1e-46 190.3 284 43.0
Dinv25437 Davidia involucrata HOM05D005029 ORTHO05D006052 2.7e-46 189.9 231 53.7
Sabra18G0116800 Salix brachista HOM05D005029 ORTHO05D006052 2.7e-46 189.9 291 44.0
Lalb_Chr11g0074801 Lupinus albus HOM05D005029 ORTHO05D006052 3.5e-46 189.5 290 44.8
Oeu044675.2 Olea europaea HOM05D005029 ORTHO05D006052 4.6e-46 189.1 291 42.3
Hund26310 Selenicereus undatus HOM05D005029 ORTHO05D006052 4.6e-46 189.1 257 44.4
THA.LOC104814654 Tarenaya hassleriana HOM05D005029 ORTHO05D006052 6.0e-46 188.7 259 47.1
TPR.G7936 Trifolium pratense HOM05D005029 ORTHO05D006052 6.0e-46 188.7 302 44.7
Potri.018G143000 Populus trichocarpa HOM05D005029 ORTHO05D006052 7.9e-46 188.3 297 43.4
PSO170G2568 Papaver somniferum HOM05D005029 ORTHO05D006052 1.3e-45 187.6 289 46.7
BraA08t33909Z Brassica rapa HOM05D005029 ORTHO05D006052 2.3e-45 186.8 292 43.5
MBI19_g21652_MAGBIO Magnolia biondii HOM05D005029 ORTHO05D006052 2.5e-44 183.3 272 45.2
PSO063G5693 Papaver somniferum HOM05D005029 ORTHO05D006052 2.5e-44 183.3 284 46.8
Sabra06G0056600 Salix brachista HOM05D005029 ORTHO05D006052 9.7e-44 181.4 315 39.0
Atru.chr7.763 Acer truncatum HOM05D005029 ORTHO05D006052 2.2e-43 180.3 287 44.3
Atru.chr7.783 Acer truncatum HOM05D005029 ORTHO05D006052 2.2e-43 180.3 287 44.3
Aa31LG2G20590 Aethionema arabicum HOM05D005029 ORTHO05D006052 2.2e-43 180.3 290 41.7
ATR0626G110 Amborella trichopoda HOM05D005029 ORTHO05D006052 8.2e-43 178.3 251 45.0
A08p19470 Brassica napus HOM05D005029 ORTHO05D006052 8.2e-43 178.3 288 42.7
SHI09006 Sapria himalayana HOM05D005029 ORTHO05D006052 8.2e-43 178.3 242 46.3
Ah.09g230060 Amaranthus hybridus HOM05D005029 ORTHO05D006052 1.8e-42 177.2 263 42.2
GSVIVG01010867001 Vitis vinifera HOM05D005029 ORTHO05D006052 2.4e-42 176.8 290 41.0
MBI13_g01742_MAGBIO Magnolia biondii HOM05D005029 ORTHO05D006052 3.1e-42 176.4 287 43.6
arahy.Tifrunner.gnm1.ann1.K38ATV Arachis hypogaea HOM05D005029 ORTHO05D006052 4.1e-42 176.0 311 44.7
CsaV3_1G031840 Cucumis sativus L. HOM05D005029 ORTHO05D006052 5.3e-42 175.6 265 46.4
Ciclev10009010m.g Citrus clementina HOM05D005029 ORTHO05D006052 6.9e-42 175.3 248 44.4
Ah.14g083530 Amaranthus hybridus HOM05D005029 ORTHO05D006052 5.0e-40 169.1 293 41.0
ECA240G3783 Erigeron canadensis HOM05D005029 ORTHO05D006052 1.1e-39 167.9 235 46.4
Sc16g0010440 Simmondsia chinensis HOM05D005029 ORTHO05D006052 1.1e-39 167.9 295 40.3
BraA01t00761Z Brassica rapa HOM05D005029 ORTHO05D006052 1.4e-39 167.5 243 46.5
BcaC07g37961 Brassica carinata HOM05D005029 ORTHO05D006052 1.9e-39 167.2 282 40.1
Lalb_Chr13g0300031 Lupinus albus HOM05D005029 ORTHO05D006052 3.2e-39 166.4 292 41.8
QL02p046501 Quercus lobata HOM05D005029 ORTHO05D006052 9.4e-39 164.9 386 36.3
C03p88970 Brassica napus HOM05D005029 ORTHO05D006052 1.6e-38 164.1 249 43.4
BcaC09g51764 Brassica carinata HOM05D005029 ORTHO05D006052 3.6e-38 162.9 244 43.4
Nn2g14879 Nelumbo nucifera HOM05D005029 ORTHO05D006052 6.1e-38 162.2 283 43.8
BcaC09g51777 Brassica carinata HOM05D000106 ORTHO05D000160 1.0e-37 161.4 284 40.8
A01p08140 Brassica napus HOM05D005029 ORTHO05D006052 1.8e-37 160.6 291 41.9
Sed0026503 Sechium edule HOM05D005029 ORTHO05D006052 1.1e-36 157.9 303 41.9
BolC1t00902H Brassica oleracea HOM05D005029 ORTHO05D006052 2.5e-36 156.8 288 40.6
PGR142G1735 Punica granatum HOM05D005029 ORTHO05D006052 2.5e-36 156.8 263 44.9
arahy.Tifrunner.gnm1.ann1.J7B49U Arachis hypogaea HOM05D005029 ORTHO05D006052 4.3e-36 156.0 167 59.9
C01p09110 Brassica napus HOM05D005029 ORTHO05D006052 4.3e-36 156.0 280 41.4
Zm00001eb430500 Zea mays HOM05D005029 ORTHO05D006052 9.7e-36 154.8 254 43.7
Zm00001eb071460 Zea mays HOM05D005029 ORTHO05D006052 2.2e-35 153.7 254 42.1
Migut.J00802 Erythranthe guttata HOM05D005029 ORTHO05D006052 4.8e-35 152.5 289 40.1
ClCG06G013560 Citrullus lanatus HOM05D005029 ORTHO05D006052 6.3e-35 152.1 285 40.7
CSS0012939 Camellia sinensis var. sinensis HOM05D005029 ORTHO05D006052 1.4e-34 151.0 304 38.8
MELO3C017433.2 Cucumis melo HOM05D005029 ORTHO05D006052 2.4e-34 150.2 313 41.5
Os04g0606800 Oryza sativa ssp. japonica HOM05D005029 ORTHO05D006052 1.2e-33 147.9 244 43.0
HPP92_004703 Vanilla planifolia HOM05D005029 ORTHO05D006052 4.5e-33 146.0 238 43.3
Lj5A672T26 Lonicera japonica HOM05D005029 ORTHO05D006052 4.2e-31 139.4 162 51.2
SEGI_23735 Sequoiadendron giganteum HOM05D005029 ORTHO05D006052 5.5e-31 139.0 263 38.8
CDE04G3679 Ceratophyllum demersum HOM05D005029 ORTHO05D006052 1.6e-30 137.5 295 37.3
C07p57380 Brassica napus HOM05D005029 ORTHO05D006052 2.7e-30 136.7 173 48.6
Mapoly0076s0086 Marchantia polymorpha HOM05D005029 ORTHO05D006052 6.1e-30 135.6 296 34.1
Duzib168G1982 Durio zibethinus HOM05D005029 ORTHO05D006052 1.8e-29 134.0 155 52.3
CDE02G0552 Ceratophyllum demersum HOM05D005029 ORTHO05D006052 3.0e-29 133.3 297 37.7
AagrBONN_evm.TU.Sc2ySwM_368.2110 Anthoceros agrestis HOM05D005029 ORTHO05D006052 8.8e-29 131.7 264 36.4
BcaB06g28011 Brassica carinata HOM05D005029 ORTHO05D006052 5.5e-23 112.5 95 60.0
Pp3c9_8340 Physcomitrium patens HOM05D005029 ORTHO05D006052 9.4e-23 111.7 287 36.9
SMO358G0278 Selaginella moellendorffii HOM05D005029 ORTHO05D006052 9.4e-23 111.7 275 34.5
Rhsim01G0118000 Rhododendron simsii HOM05D005029 ORTHO05D006052 9.7e-20 101.7 231 33.3
BcaC05g25672 Brassica carinata HOM05D005029 ORTHO05D006052 7.7e-17 92.0 229 34.1
BolC6t39910H Brassica oleracea HOM05D005029 ORTHO05D006052 9.4e-15 85.1 160 37.5
A03p59350 Brassica napus HOM05D005029 ORTHO05D006052 5.2e-13 79.3 143 41.3
BcaB04g18770 Brassica carinata HOM05D005029 ORTHO05D006052 4.8e-11 72.8 75 57.3
CBR_g52634 Chara braunii HOM05D005029 ORTHO05D006052 3.2e-07 60.1 107 42.1
vmacro20818 Vaccinium macrocarpon HOM05D005029 ORTHO05D006052 3.2e-07 60.1 78 41.0


User provided reference genes

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