Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_699.g19198 Utricularia gibba HOM05D007819 ORTHO05D009848 1.0e-179 633.3 306 100.0
Migut.N02626 Erythranthe guttata HOM05D007819 ORTHO05D009848 1.2e-103 380.6 269 68.0
Oeu017391.1 Olea europaea HOM05D007819 ORTHO05D009848 7.1e-101 371.3 270 67.0
Cc01_g11630 Coffea canephora HOM05D007819 ORTHO05D009848 3.1e-96 355.9 254 66.5
PSO339G1273 Papaver somniferum HOM05D007819 ORTHO05D009848 4.0e-96 355.5 269 62.5
TWI75G0698 Tripterygium wilfordii HOM05D007819 ORTHO05D009848 1.5e-95 353.6 271 62.4
PSO384G2242 Papaver somniferum HOM05D007819 ORTHO05D009848 3.4e-95 352.4 269 62.1
Nn2g10668 Nelumbo nucifera HOM05D007819 ORTHO05D009848 1.7e-94 350.1 267 61.8
Duzib168G1088 Durio zibethinus HOM05D007819 ORTHO05D009848 3.8e-94 349.0 284 58.8
Sopen06g001100 Solanum pennellii HOM05D007819 ORTHO05D009848 6.4e-94 348.2 258 62.8
Atru.chr3.3713 Acer truncatum HOM05D007819 ORTHO05D009848 8.4e-94 347.8 269 60.6
PGR102G1079 Punica granatum HOM05D007819 ORTHO05D009848 1.1e-93 347.4 266 60.2
Cpa.g.sc318.6 Carica papaya HOM05D007819 ORTHO05D009848 1.9e-93 346.7 256 62.1
Manes.04G025500 Manihot esculenta HOM05D007819 ORTHO05D009848 1.9e-93 346.7 258 60.9
CANSAT54G2163 Cannabis sativa HOM05D007819 ORTHO05D009848 3.2e-93 345.9 259 63.3
TAR623G0280 Trochodendron aralioides HOM05D007819 ORTHO05D009848 7.1e-93 344.7 260 62.3
Thecc.09G261200 Theobroma cacao HOM05D007819 ORTHO05D009848 2.7e-92 342.8 258 62.4
Eucgr.B02464 Eucalyptus grandis HOM05D007819 ORTHO05D009848 3.5e-92 342.4 247 62.3
COL.COLO4_25254 Corchorus olitorius HOM05D007819 ORTHO05D009848 4.6e-92 342.0 267 59.9
Gohir.A09G105900 Gossypium hirsutum HOM05D007819 ORTHO05D009848 4.6e-92 342.0 259 62.5
Gorai.006G121000 Gossypium raimondii HOM05D007819 ORTHO05D009848 1.7e-91 340.1 258 62.8
CiPaw.13G106200 Carya illinoinensis HOM05D007819 ORTHO05D009848 2.3e-91 339.7 254 61.8
Lsat_1_v5_gn_2_25861 Lactuca sativa HOM05D007819 ORTHO05D009848 5.1e-91 338.6 256 62.1
Nitab4.5_0007369g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 1.5e-90 337.0 281 57.7
Gohir.D09G102600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 2.5e-90 336.3 247 64.4
Hma1.2p1_2033F.1_g311900 Hydrangea macrophylla HOM05D007819 ORTHO05D009848 1.2e-89 334.0 248 60.9
MD11G1124900 Malus domestica HOM05D007819 ORTHO05D009848 1.6e-89 333.6 258 60.1
RcHm_v2.0_Chr5g0060991 Rosa chinensis HOM05D007819 ORTHO05D009848 2.1e-89 333.2 286 57.3
Gohir.D05G077600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 4.7e-89 332.0 258 60.1
Gorai.009G079100 Gossypium raimondii HOM05D007819 ORTHO05D009848 4.7e-89 332.0 258 60.1
FAN21G3467 Fragaria x ananassa HOM05D007819 ORTHO05D009848 1.4e-88 330.5 286 56.3
Gohir.A05G074800 Gossypium hirsutum HOM05D007819 ORTHO05D009848 1.8e-88 330.1 258 59.7
Gohir.A05G074866 Gossypium hirsutum HOM05D007819 ORTHO05D009848 3.1e-88 329.3 258 59.7
Nitab4.5_0000888g0180 Nicotiana tabacum HOM05D007819 ORTHO05D009848 3.1e-88 329.3 290 54.5
CiPaw.14G077600 Carya illinoinensis HOM05D007819 ORTHO05D009848 9.0e-88 327.8 263 61.2
FAN25G2530 Fragaria x ananassa HOM05D007819 ORTHO05D009848 1.5e-87 327.0 247 61.5
AUR62006507 Chenopodium quinoa HOM05D007819 ORTHO05D009848 7.6e-87 324.7 280 53.2
QL01p036876 Quercus lobata HOM05D007819 ORTHO05D009848 2.4e-85 319.7 258 57.8
MD03G1111000 Malus domestica HOM05D007819 ORTHO05D009848 5.4e-85 318.5 258 57.8
CiPaw.13G106300 Carya illinoinensis HOM05D007819 ORTHO05D009848 4.6e-84 315.5 253 59.3
CiPaw.14G077700 Carya illinoinensis HOM05D007819 ORTHO05D009848 1.7e-83 313.5 247 59.1
FAN16G1444 Fragaria x ananassa HOM05D007819 ORTHO05D009848 1.1e-80 304.3 352 46.9
DCAR_005475 Daucus carota HOM05D007819 ORTHO05D009848 2.4e-80 303.1 229 60.7
Mapoly0103s0031 Marchantia polymorpha HOM05D007819 ORTHO05D009848 3.8e-78 295.8 256 55.5
Lj1A183T52 Lonicera japonica HOM05D007819 ORTHO05D009848 4.9e-78 295.4 259 54.1
FvH4_3g33520 Fragaria vesca HOM05D007819 ORTHO05D009848 2.8e-73 279.6 212 63.2
SGA_v2.0_scaffold2G00920 Striga asiatica HOM05D007819 ORTHO05D009848 6.9e-72 275.0 242 59.1
Sc21g0003720 Simmondsia chinensis HOM05D007819 ORTHO05D009848 2.0e-71 273.5 213 60.1
Peaxi162Scf00389g00619 Petunia axillaris HOM05D007819 ORTHO05D009848 1.9e-69 266.9 271 50.2
Zm00001eb013150 Zea mays HOM05D007819 ORTHO05D009848 1.2e-68 264.2 269 48.3
HPP92_025075 Vanilla planifolia HOM05D007819 ORTHO05D009848 5.1e-67 258.8 266 47.0
Ciclev10029813m.g Citrus clementina HOM05D007819 ORTHO05D009848 8.7e-67 258.1 254 50.4
Haze_23935 Corylus avellana HOM05D007819 ORTHO05D009848 2.5e-66 256.5 214 58.9
Nitab4.5_0001578g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 5.3e-64 248.8 232 50.9
Solyc06g005100.3 Solanum lycopersicum HOM05D007819 ORTHO05D009848 2.0e-63 246.9 182 59.9
Prupe.6G093600 Prunus persica HOM05D007819 ORTHO05D009848 3.4e-63 246.1 186 60.2
Nitab4.5_0000022g0250 Nicotiana tabacum HOM05D007819 ORTHO05D009848 1.7e-62 243.8 212 58.0
Dinv32800 Davidia involucrata HOM05D007819 ORTHO05D009848 4.9e-62 242.3 196 58.2
MSTRG.12613 Avicennia marina HOM05D007819 ORTHO05D009848 1.3e-59 234.2 166 65.7
CAN.G1171.1 Capsicum annuum HOM05D007819 ORTHO05D009848 2.3e-59 233.4 272 46.3
Pp3c21_1570 Physcomitrium patens HOM05D007819 ORTHO05D009848 3.0e-59 233.0 277 44.8
Mapoly0155s0016 Marchantia polymorpha HOM05D007819 ORTHO05D009848 6.3e-57 225.3 256 43.0
AagrBONN_evm.TU.Sc2ySwM_344.1297 Anthoceros agrestis HOM05D007819 ORTHO05D009848 2.0e-55 220.3 275 41.1
Pp3c9_23950 Physcomitrium patens HOM05D007819 ORTHO05D009848 2.0e-55 220.3 256 42.2
Pp3c15_22830 Physcomitrium patens HOM05D007819 ORTHO05D009848 7.7e-55 218.4 256 41.8
GSVIVG01025124001 Vitis vinifera HOM05D007819 ORTHO05D009848 2.9e-54 216.5 154 60.4
Mapoly0008s0213 Marchantia polymorpha HOM05D007819 ORTHO05D009848 3.8e-54 216.1 256 41.4
AagrBONN_evm.TU.Sc2ySwM_344.3840 Anthoceros agrestis HOM05D007819 ORTHO05D009848 2.7e-52 209.9 256 40.2
PGSC0003DMG401025397 Solanum tuberosum HOM05D007819 ORTHO05D009848 3.6e-52 209.5 164 60.4
Mapoly0035s0019 Marchantia polymorpha HOM05D007819 ORTHO05D009848 3.9e-51 206.1 256 39.1
Migut.O00707 Erythranthe guttata HOM05D007819 ORTHO05D009848 5.3e-48 195.7 131 64.9
AUR62025022 Chenopodium quinoa HOM05D007819 ORTHO05D009848 2.0e-47 193.7 215 47.4
EL10Ac9g22426 Beta vulgaris HOM05D007819 ORTHO05D009848 2.6e-39 166.8 145 51.0
Mapoly0088s0067 Marchantia polymorpha HOM05D000370 ORTHO05D001335 3.5e-39 166.4 250 33.6
Pp3c3_24540 Physcomitrium patens HOM05D007819 ORTHO05D009848 1.1e-37 161.4 248 31.9
Pp3c12_18930 Physcomitrium patens HOM05D000370 ORTHO05D009848 9.4e-37 158.3 248 31.5
Pp3c12_18938 Physcomitrium patens HOM05D000370 ORTHO05D009848 9.4e-37 158.3 248 31.5
SalBow3G4000 Salvia bowleyana HOM05D007819 ORTHO05D009848 1.7e-33 147.5 110 69.1
MSTRG.12612 Avicennia marina HOM05D007819 ORTHO05D009848 2.4e-32 143.7 91 73.6
QL01p036758 Quercus lobata HOM05D007819 ORTHO05D009848 2.6e-31 140.2 93 64.5
QL01p036766 Quercus lobata HOM05D007819 ORTHO05D009848 8.0e-28 128.6 87 71.3
CSS0001112 Camellia sinensis var. sinensis HOM05D007819 ORTHO05D009848 3.0e-27 126.7 93 66.7
CSS0025937 Camellia sinensis var. sinensis HOM05D007819 ORTHO05D009848 3.0e-27 126.7 93 66.7
Os03g0287100 Oryza sativa ssp. japonica HOM05D007819 ORTHO05D009848 5.0e-22 109.4 90 54.4
Oeu012676.1 Olea europaea HOM05D007819 ORTHO05D009848 6.5e-22 109.0 74 62.2
EL10Ac9g22427 Beta vulgaris HOM05D007819 ORTHO05D009848 1.1e-13 81.6 128 43.0
FAN11G3664 Fragaria x ananassa HOM05D007819 ORTHO05D009848 3.6e-12 76.6 59 67.8
CiPaw.09G094500 Carya illinoinensis HOM05D007819 ORTHO05D009848 1.0e-06 58.5 44 65.9


User provided reference genes

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