Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_145.g32368 Utricularia gibba HOM05D007167 ORTHO05D001679 3.8e-31 137.5 67 100.0
unitig_668.g29633 Utricularia gibba HOM05D007167 ORTHO05D001679 3.8e-31 137.5 67 100.0
Psat0s8399g0040 Pisum sativum HOM05D007167 ORTHO05D001679 1.9e-30 135.2 67 98.5
arahy.Tifrunner.gnm1.ann1.ET488V Arachis hypogaea HOM05D007167 ORTHO05D001679 2.4e-30 134.8 67 98.5
Rhsim05G0123600 Rhododendron simsii HOM05D016882 ORTHO05D001745 7.1e-30 133.3 67 97.0
Atru.chr10.38 Acer truncatum HOM05D007167 ORTHO05D001679 9.3e-30 132.9 67 97.0
Lj5g0012521 Lotus japonicus HOM05D007167 ORTHO05D001679 3.5e-29 131.0 67 95.5
Lj5g0016692 Lotus japonicus HOM05D007167 ORTHO05D001679 3.5e-29 131.0 67 95.5
Lj6g0017867 Lotus japonicus HOM05D007167 ORTHO05D001679 3.5e-29 131.0 67 95.5
LjContig00006g0001730 Lotus japonicus HOM05D007167 ORTHO05D001679 3.5e-29 131.0 67 95.5
LjContig00547g0012562 Lotus japonicus HOM05D007167 ORTHO05D001679 1.9e-27 125.2 63 95.2
unitig_245.g35372 Utricularia gibba HOM05D007167 ORTHO05D001679 1.3e-26 122.5 58 100.0
EL10Ac2g03014 Beta vulgaris HOM05D007167 ORTHO05D001679 2.1e-26 121.7 66 89.4
Medtr0021s0120 Medicago truncatula HOM05D007167 ORTHO05D010211 2.8e-26 121.3 59 98.3
Mapoly4038s0001 Marchantia polymorpha HOM05D007167 ORTHO05D001679 3.6e-26 120.9 67 89.6
Sc12g0000010 Simmondsia chinensis HOM05D007167 ORTHO05D001679 9.0e-25 116.3 57 96.5
Sc14g0003700 Simmondsia chinensis HOM05D007167 ORTHO05D013628 9.0e-25 116.3 57 96.5
Sc14g0003770 Simmondsia chinensis HOM05D007167 ORTHO05D001070 9.0e-25 116.3 57 96.5
Sc14g0003870 Simmondsia chinensis HOM05D007167 ORTHO05D013628 9.0e-25 116.3 57 96.5
Sc14g0004040 Simmondsia chinensis HOM05D007167 ORTHO05D001679 9.0e-25 116.3 57 96.5
Sc14g0004080 Simmondsia chinensis HOM05D007167 ORTHO05D001679 9.0e-25 116.3 57 96.5
Sc14g0004250 Simmondsia chinensis HOM05D007167 ORTHO05D013628 9.0e-25 116.3 57 96.5
Sc14g0004280 Simmondsia chinensis HOM05D007167 ORTHO05D001679 9.0e-25 116.3 57 96.5
Sc14g0004310 Simmondsia chinensis HOM05D007167 ORTHO05D001679 9.0e-25 116.3 57 96.5
Sc14g0004320 Simmondsia chinensis HOM05D007167 ORTHO05D013628 9.0e-25 116.3 57 96.5
Sc14g0004350 Simmondsia chinensis HOM05D007167 ORTHO05D001679 9.0e-25 116.3 57 96.5
Sc18g0006340 Simmondsia chinensis HOM05D007167 ORTHO05D000922 9.0e-25 116.3 57 96.5
ScUNg0000050 Simmondsia chinensis HOM05D007167 ORTHO05D000922 9.0e-25 116.3 57 96.5
ScUNg0000170 Simmondsia chinensis HOM05D007167 ORTHO05D000922 9.0e-25 116.3 57 96.5
ScUNg0000250 Simmondsia chinensis HOM05D007167 ORTHO05D013628 9.0e-25 116.3 57 96.5
ScUNg0000310 Simmondsia chinensis HOM05D007167 ORTHO05D001679 9.0e-25 116.3 57 96.5
ScUNg0000440 Simmondsia chinensis HOM05D013320 ORTHO05D000922 9.0e-25 116.3 57 96.5
ScUNg0000500 Simmondsia chinensis HOM05D013320 ORTHO05D001679 9.0e-25 116.3 57 96.5
ScUNg0000660 Simmondsia chinensis HOM05D007167 ORTHO05D001679 9.0e-25 116.3 57 96.5
ScUNg0000690 Simmondsia chinensis HOM05D007167 ORTHO05D001679 9.0e-25 116.3 57 96.5
ScUNg0000730 Simmondsia chinensis HOM05D007167 ORTHO05D001679 9.0e-25 116.3 57 96.5
ScUNg0000780 Simmondsia chinensis HOM05D007167 ORTHO05D013628 9.0e-25 116.3 57 96.5
ScUNg0000790 Simmondsia chinensis HOM05D007167 ORTHO05D013628 9.0e-25 116.3 57 96.5
ScUNg0000880 Simmondsia chinensis HOM05D007167 ORTHO05D000922 9.0e-25 116.3 57 96.5
ScUNg0000980 Simmondsia chinensis HOM05D007167 ORTHO05D000922 9.0e-25 116.3 57 96.5
ScUNg0001050 Simmondsia chinensis HOM05D007167 ORTHO05D001679 9.0e-25 116.3 57 96.5
ScUNg0001240 Simmondsia chinensis HOM05D007167 ORTHO05D001679 9.0e-25 116.3 57 96.5
ScUNg0001280 Simmondsia chinensis HOM05D007167 ORTHO05D001679 9.0e-25 116.3 57 96.5
ScUNg0001330 Simmondsia chinensis HOM05D007167 ORTHO05D013628 9.0e-25 116.3 57 96.5
ScUNg0001370 Simmondsia chinensis HOM05D007167 ORTHO05D001679 9.0e-25 116.3 57 96.5
ScUNg0001420 Simmondsia chinensis HOM05D007167 ORTHO05D001679 9.0e-25 116.3 57 96.5
ScUNg0001460 Simmondsia chinensis HOM05D007167 ORTHO05D000922 9.0e-25 116.3 57 96.5
EL10Ac5g11394 Beta vulgaris HOM05D007167 ORTHO05D000922 7.6e-24 113.2 59 93.2
CsaV3_UNG240550 Cucumis sativus L. HOM05D007167 ORTHO05D001679 2.4e-22 108.2 51 100.0
Sc02g0009430 Simmondsia chinensis HOM05D007167 ORTHO05D001679 4.6e-21 104.0 49 98.0
arahy.Tifrunner.gnm1.ann1.XTZD9Y Arachis hypogaea HOM05D007167 ORTHO05D001679 6.7e-20 100.1 47 100.0
Sc06g0002460 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.3e-19 97.8 59 83.1
SHI35535 Sapria himalayana HOM05D015261 ORTHO05D001679 3.1e-17 91.3 54 81.5
SHI35536 Sapria himalayana HOM05D015261 ORTHO05D000626 3.1e-17 91.3 54 81.5
SHI35538 Sapria himalayana HOM05D015261 ORTHO05D001679 3.1e-17 91.3 54 81.5
SHI39806 Sapria himalayana HOM05D015261 ORTHO05D001679 3.1e-17 91.3 54 81.5
SHI39841 Sapria himalayana HOM05D015261 ORTHO05D001679 3.1e-17 91.3 54 81.5
Sed0028154 Sechium edule HOM05D007167 ORTHO05D001679 5.3e-17 90.5 41 100.0
EL10As19g24181 Beta vulgaris HOM05D007167 ORTHO05D001679 2.6e-16 88.2 41 100.0
Thecc.07G180900 Theobroma cacao HOM05D007167 ORTHO05D001679 1.3e-15 85.9 58 74.1
CBR_g28706 Chara braunii HOM05D010018 ORTHO05D003704 1.1e-11 72.8 44 77.3
MCO14G190 Micromonas commoda HOM05D007167 ORTHO05D001679 4.3e-11 70.9 37 83.8
MCO14G191 Micromonas commoda HOM05D007167 ORTHO05D001679 4.3e-11 70.9 37 83.8
MCO14G192 Micromonas commoda HOM05D007167 ORTHO05D001679 4.3e-11 70.9 37 83.8
QL93p0473_0011 Quercus lobata HOM05D016732 ORTHO05D001679 4.3e-11 70.9 41 78.0
QL93p0473_0019 Quercus lobata HOM05D016732 ORTHO05D001679 4.3e-11 70.9 41 78.0
QL93p0473_0029 Quercus lobata HOM05D016732 ORTHO05D001679 4.3e-11 70.9 41 78.0
QL93p0539_0002 Quercus lobata HOM05D016732 ORTHO05D001679 4.3e-11 70.9 41 78.0
QL93p0853_0005 Quercus lobata HOM05D016732 ORTHO05D001679 4.3e-11 70.9 41 78.0
TAR408G0001 Trochodendron aralioides HOM05D007167 ORTHO05D001679 2.1e-10 68.6 41 75.6
QL93p0943_0001 Quercus lobata HOM05D016732 ORTHO05D001679 1.4e-09 65.9 40 75.0
Sc07g0005250 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.1e-09 64.7 39 79.5
Oeu024742.1 Olea europaea HOM05D007167 ORTHO05D001679 4.9e-07 57.4 38 73.7
PGSC0003DMG400019038 Solanum tuberosum HOM05D001319 ORTHO05D000922 4.2e-06 54.3 31 83.9


User provided reference genes

Program Settings