Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_65.g29889 Utricularia gibba HOM05D007518 ORTHO05D008168 8.7e-56 220.3 132 100.0
unitig_62.g23458 Utricularia gibba HOM05D007518 ORTHO05D008168 1.2e-20 103.6 88 85.2
SMO361G0415 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 1.6e-17 93.2 79 53.2
SMO361G0359 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 3.0e-16 89.0 88 70.5
Migut.L00282 Erythranthe guttata HOM05D007518 ORTHO05D008168 3.9e-16 88.6 89 76.4
CAN.G1028.6 Capsicum annuum HOM05D007518 ORTHO05D008168 2.0e-15 86.3 89 73.0
Nitab4.5_0016476g0010 Nicotiana tabacum HOM05D007518 ORTHO05D008168 2.6e-15 85.9 89 73.0
THA.LOC104821280 Tarenaya hassleriana HOM05D007518 ORTHO05D008168 3.3e-15 85.5 89 74.2
Sabra07G0023900 Salix brachista HOM05D007518 ORTHO05D008168 4.4e-15 85.1 89 73.0
Solyc03g034070.1 Solanum lycopersicum HOM05D007518 ORTHO05D008168 4.4e-15 85.1 89 71.9
Sopen03g006850 Solanum pennellii HOM05D007518 ORTHO05D008168 4.4e-15 85.1 89 71.9
Thecc.01G037800 Theobroma cacao HOM05D007518 ORTHO05D008168 5.7e-15 84.7 89 73.0
TWI53G0381 Tripterygium wilfordii HOM05D007518 ORTHO05D008168 5.7e-15 84.7 89 71.9
Ciclev10026615m.g Citrus clementina HOM05D007518 ORTHO05D008168 7.4e-15 84.3 89 74.2
Gohir.D03G015500 Gossypium hirsutum HOM05D007518 ORTHO05D008168 7.4e-15 84.3 89 73.0
Gorai.003G015700 Gossypium raimondii HOM05D007518 ORTHO05D008168 7.4e-15 84.3 89 73.0
Atru.chr3.555 Acer truncatum HOM05D007518 ORTHO05D008168 1.3e-14 83.6 89 73.0
Gohir.A02G164600 Gossypium hirsutum HOM05D007518 ORTHO05D008168 2.2e-14 82.8 89 71.9
Rhsim10G0067800 Rhododendron simsii HOM05D007518 ORTHO05D008168 2.2e-14 82.8 89 70.8
PGSC0003DMG400017778 Solanum tuberosum HOM05D007518 ORTHO05D008168 2.2e-14 82.8 89 70.8
COL.COLO4_22099 Corchorus olitorius HOM05D007518 ORTHO05D008168 2.8e-14 82.4 89 71.9
Aa31LG4G18840 Aethionema arabicum HOM05D007518 ORTHO05D008168 3.7e-14 82.0 89 71.9
CSS0014655 Camellia sinensis var. sinensis HOM05D007518 ORTHO05D008168 3.7e-14 82.0 89 70.8
CBR_g37409 Chara braunii HOM05D007518 ORTHO05D008168 3.7e-14 82.0 92 48.9
AL5G30840 Arabidopsis lyrata HOM05D007518 ORTHO05D008168 4.8e-14 81.6 89 71.9
DCAR_021444 Daucus carota HOM05D007518 ORTHO05D008168 4.8e-14 81.6 89 71.9
FAN28G1656 Fragaria x ananassa HOM05D007518 ORTHO05D008168 4.8e-14 81.6 89 70.8
CsaV3_6G046170 Cucumis sativus L. HOM05D007518 ORTHO05D008168 6.3e-14 81.3 89 69.7
Lj2g0015504 Lotus japonicus HOM05D007518 ORTHO05D008168 6.3e-14 81.3 89 69.7
FvH4_1g13510 Fragaria vesca HOM05D007518 ORTHO05D008168 8.2e-14 80.9 89 69.7
FAN19G2612 Fragaria x ananassa HOM05D007518 ORTHO05D008168 8.2e-14 80.9 89 69.7
RcHm_v2.0_Chr2g0101891 Rosa chinensis HOM05D007518 ORTHO05D008168 8.2e-14 80.9 89 69.7
TAR628G0256 Trochodendron aralioides HOM05D007518 ORTHO05D008168 8.2e-14 80.9 89 70.8
VMungo1215G2461 Vigna mungo HOM05D007518 ORTHO05D008168 8.2e-14 80.9 89 69.7
Ah.03g139360 Amaranthus hybridus HOM05D007518 ORTHO05D008168 1.1e-13 80.5 89 70.8
CANSAT01G2215 Cannabis sativa HOM05D007518 ORTHO05D008168 1.1e-13 80.5 89 69.7
MD02G1150400 Malus domestica HOM05D007518 ORTHO05D008168 1.1e-13 80.5 89 70.8
Nitab4.5_0001038g0130 Nicotiana tabacum HOM05D007518 ORTHO05D008168 1.4e-13 80.1 89 70.8
Prupe.7G152700 Prunus persica HOM05D007518 ORTHO05D008168 1.4e-13 80.1 89 70.8
Sp5g11540 Schrenkiella parvula HOM05D007518 ORTHO05D008168 1.4e-13 80.1 89 71.9
Sed0026205 Sechium edule HOM05D007518 ORTHO05D008168 1.4e-13 80.1 89 68.5
A06p05270 Brassica napus HOM05D007518 ORTHO05D008168 1.8e-13 79.7 89 70.8
BolC5t29390H Brassica oleracea HOM05D007518 ORTHO05D008168 1.8e-13 79.7 89 70.8
BraA06t23735Z Brassica rapa HOM05D007518 ORTHO05D008168 1.8e-13 79.7 89 70.8
Carub.0005s1701 Capsella rubella HOM05D007518 ORTHO05D008168 1.8e-13 79.7 89 70.8
Thhalv10010782m.g Eutrema salsugineum HOM05D007518 ORTHO05D008168 1.8e-13 79.7 89 70.8
Glyma.11G067100 Glycine max HOM05D007518 ORTHO05D008168 1.8e-13 79.7 89 69.7
Manes.01G134000 Manihot esculenta HOM05D007518 ORTHO05D008168 1.8e-13 79.7 89 68.5
Potri.007G027400 Populus trichocarpa HOM05D007518 ORTHO05D008168 1.8e-13 79.7 89 68.5
PGR119G2546 Punica granatum HOM05D007518 ORTHO05D008168 1.8e-13 79.7 89 68.5
Aqoxy6G01075 Aquilegia oxysepala HOM05D007518 ORTHO05D008168 2.4e-13 79.3 89 68.5
AT3G50685 Arabidopsis thaliana HOM05D007518 ORTHO05D008168 3.1e-13 79.0 89 69.7
arahy.Tifrunner.gnm1.ann1.5UMV3I Arachis hypogaea HOM05D007518 ORTHO05D008168 3.1e-13 79.0 89 68.5
arahy.Tifrunner.gnm1.ann1.RRU65L Arachis hypogaea HOM05D007518 ORTHO05D008168 3.1e-13 79.0 89 68.5
CiPaw.02G016200 Carya illinoinensis HOM05D007518 ORTHO05D008168 3.1e-13 79.0 89 68.5
Lalb_Chr09g0322501 Lupinus albus HOM05D007518 ORTHO05D008168 3.1e-13 79.0 106 59.4
MD15G1264900 Malus domestica HOM05D007518 ORTHO05D008168 3.1e-13 79.0 89 68.5
CARHR160200 Cardamine hirsuta HOM05D007518 ORTHO05D008168 4.1e-13 78.6 89 69.7
MELO3C007820.2 Cucumis melo HOM05D007518 ORTHO05D008168 5.3e-13 78.2 89 67.4
MBI16_g37747_MAGBIO Magnolia biondii HOM05D007518 ORTHO05D008168 5.3e-13 78.2 89 69.7
QL06p045656 Quercus lobata HOM05D007518 ORTHO05D008168 7.0e-13 77.8 88 68.2
C05p06340 Brassica napus HOM05D007518 ORTHO05D008168 9.1e-13 77.4 89 69.7
AUR62003171 Chenopodium quinoa HOM05D007518 ORTHO05D008168 9.1e-13 77.4 89 68.5
Pp3c15_7720 Physcomitrium patens HOM05D007518 ORTHO05D008168 9.1e-13 77.4 88 64.8
Nn1g05049 Nelumbo nucifera HOM05D007518 ORTHO05D008168 1.6e-12 76.6 89 67.4
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 2.0e-12 76.3 89 67.4
Haze_15107 Corylus avellana HOM05D007518 ORTHO05D008168 2.0e-12 76.3 89 66.3
Phvul.002G029100 Phaseolus vulgaris HOM05D007518 ORTHO05D008168 2.0e-12 76.3 89 67.4
TPR.G28676 Trifolium pratense HOM05D007518 ORTHO05D008168 2.0e-12 76.3 89 67.4
Cfa004294 Carpinus fangiana HOM05D007518 ORTHO05D008168 2.6e-12 75.9 89 66.3
Cc07_g09360 Coffea canephora HOM05D007518 ORTHO05D008168 2.6e-12 75.9 89 68.5
Oeu007443.1 Olea europaea HOM05D007518 ORTHO05D008168 2.6e-12 75.9 89 67.4
PSO541G1957 Papaver somniferum HOM05D007518 ORTHO05D008168 2.6e-12 75.9 91 67.0
PSO675G1394 Papaver somniferum HOM05D007518 ORTHO05D008168 2.6e-12 75.9 91 67.0
Cfa004293 Carpinus fangiana HOM05D007518 ORTHO05D008168 3.5e-12 75.5 89 66.3
Eucgr.I02457 Eucalyptus grandis HOM05D007518 ORTHO05D008168 3.5e-12 75.5 123 53.7
Mapoly0168s0019 Marchantia polymorpha HOM05D007518 ORTHO05D008168 5.9e-12 74.7 89 67.4
SGA_v2.0_scaffold248G44914 Striga asiatica HOM05D007518 ORTHO05D008168 5.9e-12 74.7 89 66.3
Medtr5g019920 Medicago truncatula HOM05D007518 ORTHO05D008168 7.7e-12 74.3 89 66.3
SEGI_19868 Sequoiadendron giganteum HOM05D007518 ORTHO05D008168 1.0e-11 73.9 89 66.3
HanXRQChr16g0530261 Helianthus annuus HOM05D007518 ORTHO05D008168 2.2e-11 72.8 91 67.0
Ca_00386_v3 Cicer arietinum L. HOM05D007518 ORTHO05D008168 2.9e-11 72.4 106 49.1
Lsat_1_v5_gn_3_78660 Lactuca sativa HOM05D007518 ORTHO05D008168 5.0e-11 71.6 91 65.9
Lj2P450T11 Lonicera japonica HOM05D007518 ORTHO05D008168 8.5e-11 70.9 91 64.8
ATR0733G025 Amborella trichopoda HOM05D007518 ORTHO05D008168 1.1e-10 70.5 89 64.0
BcaB07g34066 Brassica carinata HOM05D007518 ORTHO05D008168 1.1e-10 70.5 87 62.1
Peaxi162Scf00751g00045 Petunia axillaris HOM05D007518 ORTHO05D008168 1.1e-10 70.5 89 44.9
Sc03g0000780 Simmondsia chinensis HOM05D007518 ORTHO05D008168 1.5e-10 70.1 89 62.9
Actinidia02774 Actinidia chinensis HOM05D007518 ORTHO05D008168 1.2e-09 67.0 124 36.3
PRCOL_00004191 Prasinoderma coloniale HOM05D007518 ORTHO05D008168 8.0e-09 64.3 92 59.8
ECA246G0481 Erigeron canadensis HOM05D000085 ORTHO05D000274 1.4e-08 63.5 82 67.1
Dinv26823 Davidia involucrata HOM05D002420 ORTHO05D002422 2.3e-08 62.8 82 67.1
HPP92_023606 Vanilla planifolia HOM05D007518 ORTHO05D008168 5.2e-08 61.6 89 60.7
Zm00001eb098970 Zea mays HOM05D007518 ORTHO05D008168 5.7e-07 58.2 89 59.6
Atru.chr4.788 Acer truncatum HOM05D007518 ORTHO05D008168 1.7e-06 56.6 59 52.5
AagrBONN_evm.TU.Sc2ySwM_228.2926 Anthoceros agrestis HOM05D007518 ORTHO05D008168 4.8e-06 55.1 122 47.5


User provided reference genes

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