Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_62.g23902 Utricularia gibba HOM05D004810 ORTHO05D006272 0.0e+00 2397.9 1161 100.0
MSTRG.21726 Avicennia marina HOM05D004810 ORTHO05D006272 2.0e-265 919.8 1360 41.5
SGA_v2.0_scaffold80G25689 Striga asiatica HOM05D004810 ORTHO05D006272 9.1e-250 867.8 1351 40.2
Ciclev10018506m.g Citrus clementina HOM05D004810 ORTHO05D006272 1.0e-216 758.1 1356 37.9
Actinidia21354 Actinidia chinensis HOM05D004810 ORTHO05D006272 5.4e-210 735.7 1339 37.7
Potri.002G189400 Populus trichocarpa HOM05D004810 ORTHO05D006272 9.2e-210 734.9 1368 36.5
TAR362G0253 Trochodendron aralioides HOM05D004810 ORTHO05D006272 3.0e-208 729.9 1322 37.0
Sopen01g030000 Solanum pennellii HOM05D004810 ORTHO05D006272 3.3e-207 726.5 1346 36.6
GSVIVG01028203001 Vitis vinifera HOM05D004810 ORTHO05D006272 2.6e-204 716.8 1341 35.6
FvH4_1g26470 Fragaria vesca HOM05D004810 ORTHO05D006272 7.6e-204 715.3 1353 35.5
Thecc.01G322600 Theobroma cacao HOM05D004810 ORTHO05D006272 1.7e-203 714.1 1361 36.1
Sed0025982 Sechium edule HOM05D004810 ORTHO05D006272 2.2e-203 713.8 1346 34.6
FAN23G0904 Fragaria x ananassa HOM05D004810 ORTHO05D006272 6.4e-203 712.2 1351 35.9
FAN19G2038 Fragaria x ananassa HOM05D004810 ORTHO05D006272 3.2e-202 709.9 1353 35.3
FAN26G0889 Fragaria x ananassa HOM05D004810 ORTHO05D006272 5.4e-202 709.1 1340 35.3
Cc01_g21880 Coffea canephora HOM05D004810 ORTHO05D006272 1.3e-200 704.5 1438 34.8
Manes.05G010600 Manihot esculenta HOM05D004810 ORTHO05D006272 1.7e-200 704.1 1265 37.4
Duzib138G1217 Durio zibethinus HOM05D004810 ORTHO05D006272 3.0e-200 703.4 1352 36.4
Cfa004881 Carpinus fangiana HOM05D004810 ORTHO05D006272 5.1e-200 702.6 1373 35.6
MD09G1293000 Malus domestica HOM05D004810 ORTHO05D006272 1.1e-199 701.4 1348 34.9
CsaV3_3G031590 Cucumis sativus L. HOM05D004810 ORTHO05D006272 4.3e-199 699.5 1355 35.2
ClCG10G011790 Citrullus lanatus HOM05D004810 ORTHO05D006272 5.6e-199 699.1 1377 33.9
Gorai.008G136000 Gossypium raimondii HOM05D004810 ORTHO05D006272 5.6e-199 699.1 1346 36.4
Sabra02G0166300 Salix brachista HOM05D004810 ORTHO05D006272 9.6e-199 698.4 1431 34.1
Medtr7g110260 Medicago truncatula HOM05D004810 ORTHO05D006272 2.8e-198 696.8 1339 36.8
Rhsim13G0000700 Rhododendron simsii HOM05D004810 ORTHO05D006272 1.4e-197 694.5 1375 35.3
Lj1g0015466 Lotus japonicus HOM05D004810 ORTHO05D006272 1.8e-197 694.1 1336 36.2
QL12p034348 Quercus lobata HOM05D004810 ORTHO05D006272 2.4e-197 693.7 1430 34.4
Nitab4.5_0000222g0280 Nicotiana tabacum HOM05D004810 ORTHO05D006272 5.3e-197 692.6 1291 35.8
Haze_05120 Corylus avellana HOM05D004810 ORTHO05D006272 9.0e-197 691.8 1427 34.3
RcHm_v2.0_Chr3g0486381 Rosa chinensis HOM05D004810 ORTHO05D006272 7.6e-196 688.7 1349 34.9
Nn3g21885 Nelumbo nucifera HOM05D004810 ORTHO05D006272 1.9e-194 684.1 1360 35.7
PGR142G2149 Punica granatum HOM05D004810 ORTHO05D006272 4.2e-194 682.9 1351 35.9
Ca_09236_v3 Cicer arietinum L. HOM05D004810 ORTHO05D006272 5.4e-194 682.6 1353 36.0
DCAR_018250 Daucus carota HOM05D004810 ORTHO05D006272 5.4e-194 682.6 1242 36.5
Prupe.3G004200 Prunus persica HOM05D004810 ORTHO05D006272 5.4e-194 682.6 1329 35.3
Lalb_Chr04g0260131 Lupinus albus HOM05D004810 ORTHO05D006272 2.1e-193 680.6 1336 35.5
MBI18_g09625_MAGBIO Magnolia biondii HOM05D004810 ORTHO05D006272 2.7e-193 680.2 1223 36.3
COL.COLO4_23155 Corchorus olitorius HOM05D004810 ORTHO05D006272 3.5e-193 679.9 1325 35.6
Phvul.001G216500 Phaseolus vulgaris HOM05D004810 ORTHO05D006272 3.5e-193 679.9 1329 36.0
Aqoxy5G02779 Aquilegia oxysepala HOM05D004810 ORTHO05D006272 6.0e-193 679.1 1363 34.8
arahy.Tifrunner.gnm1.ann1.NAX4N2 Arachis hypogaea HOM05D004810 ORTHO05D006272 3.0e-192 676.8 1345 35.8
arahy.Tifrunner.gnm1.ann1.RS5E8T Arachis hypogaea HOM05D004810 ORTHO05D006272 1.9e-191 674.1 1341 35.5
ECA236G0789 Erigeron canadensis HOM05D004810 ORTHO05D006272 3.3e-191 673.3 1309 35.4
TPR.G4131 Trifolium pratense HOM05D004810 ORTHO05D006272 7.3e-191 672.2 1341 36.2
Glyma.19G220100 Glycine max HOM05D004810 ORTHO05D006272 1.1e-189 668.3 1332 35.7
Hma1.2p1_0484F.1_g162890 Hydrangea macrophylla HOM05D004810 ORTHO05D006272 1.1e-189 668.3 1164 38.0
AT4G01860 Arabidopsis thaliana HOM05D004810 ORTHO05D006272 2.4e-189 667.2 1316 35.0
Eucgr.K00589 Eucalyptus grandis HOM05D004810 ORTHO05D006272 6.9e-189 665.6 1366 35.6
Atru.chr5.899 Acer truncatum HOM05D004810 ORTHO05D006272 2.0e-188 664.1 1113 38.3
VMungo1383G1823 Vigna mungo HOM05D004810 ORTHO05D006272 3.8e-187 659.8 1219 37.0
TWI14G1319 Tripterygium wilfordii HOM05D004810 ORTHO05D006272 8.4e-187 658.7 1382 33.5
MELO3C012913.2 Cucumis melo HOM05D004810 ORTHO05D006272 2.1e-185 654.1 1353 33.9
AL6G51450 Arabidopsis lyrata HOM05D004810 ORTHO05D006272 2.7e-185 653.7 1315 34.6
Aa31LG5G1530 Aethionema arabicum HOM05D004810 ORTHO05D006272 4.6e-185 652.9 1338 34.1
CiPaw.07G123600 Carya illinoinensis HOM05D004810 ORTHO05D006272 5.1e-184 649.4 1388 33.9
Thhalv10027621m.g Eutrema salsugineum HOM05D004810 ORTHO05D006272 8.7e-184 648.7 1314 34.6
A09p01330 Brassica napus HOM05D004810 ORTHO05D006272 2.5e-183 647.1 1311 34.3
Sp6g01700 Schrenkiella parvula HOM05D004810 ORTHO05D006272 2.1e-182 644.0 1327 34.6
AUR62011731 Chenopodium quinoa HOM05D004810 ORTHO05D006272 2.8e-182 643.7 1342 33.9
BcaC04g24069 Brassica carinata HOM05D004810 ORTHO05D006272 3.7e-182 643.3 1308 34.1
Gohir.A12G121200 Gossypium hirsutum HOM05D004810 ORTHO05D006272 4.8e-182 642.9 1118 38.2
BraA09t35800Z Brassica rapa HOM05D004810 ORTHO05D006272 1.1e-181 641.7 1308 34.2
THA.LOC104825930 Tarenaya hassleriana HOM05D004810 ORTHO05D006272 1.8e-181 641.0 1327 34.8
Lsat_1_v5_gn_8_167321 Lactuca sativa HOM05D004810 ORTHO05D006272 3.1e-181 640.2 1288 34.7
C09p01390 Brassica napus HOM05D004810 ORTHO05D006272 9.0e-181 638.6 1304 33.9
Carub.0006s3538 Capsella rubella HOM05D004810 ORTHO05D006272 2.9e-179 633.6 1334 34.3
HanXRQChr06g0167991 Helianthus annuus HOM05D004810 ORTHO05D006272 3.8e-179 633.3 1325 34.0
PSO170G6261 Papaver somniferum HOM05D004810 ORTHO05D006272 4.9e-179 632.9 1377 34.1
EL10As5g23578 Beta vulgaris HOM05D004810 ORTHO05D006272 1.4e-178 631.3 1395 32.8
BcaB01g02106 Brassica carinata HOM05D004810 ORTHO05D006272 9.3e-178 628.6 1182 35.8
Lj2C1214G2 Lonicera japonica HOM05D004810 ORTHO05D006272 3.0e-176 623.6 1262 35.1
PSO357G0647 Papaver somniferum HOM05D004810 ORTHO05D006272 3.9e-176 623.2 1372 33.3
BolC9t53072H Brassica oleracea HOM05D004810 ORTHO05D006272 8.7e-176 622.1 1182 35.5
ATR0796G051 Amborella trichopoda HOM05D004810 ORTHO05D006272 1.1e-170 605.1 1236 34.3
FAN28G1956 Fragaria x ananassa HOM05D004810 ORTHO05D006272 1.6e-169 601.3 1410 32.1
Hund09692 Selenicereus undatus HOM05D004810 ORTHO05D006272 3.9e-168 596.7 1330 32.6
HPP92_017301 Vanilla planifolia HOM05D004810 ORTHO05D006272 4.2e-162 576.6 1335 33.5
CSS0014565 Camellia sinensis var. sinensis HOM05D004810 ORTHO05D006272 7.9e-161 572.4 1013 36.7
Os03g0111800 Oryza sativa ssp. japonica HOM05D004810 ORTHO05D006272 6.7e-160 569.3 1191 34.5
CSS0019531 Camellia sinensis var. sinensis HOM05D004810 ORTHO05D006272 6.3e-158 562.8 1021 36.6
Sc18g0007580 Simmondsia chinensis HOM05D004810 ORTHO05D006272 1.3e-155 555.1 1096 34.9
Psat3g018400 Pisum sativum HOM05D004810 ORTHO05D006272 2.7e-153 547.4 1325 32.7
Dinv12098 Davidia involucrata HOM05D004810 ORTHO05D006272 3.0e-152 543.9 972 37.9
CDE05G2014 Ceratophyllum demersum HOM05D004810 ORTHO05D006272 6.7e-152 542.7 1222 32.7
CARHR249820 Cardamine hirsuta HOM05D004810 ORTHO05D006272 2.6e-148 530.8 1053 34.8
Hma1.2p1_0484F.1_g162880 Hydrangea macrophylla HOM05D004810 ORTHO05D006272 8.5e-147 525.8 984 36.6
Migut.D00025 Erythranthe guttata HOM05D004810 ORTHO05D006272 8.3e-134 482.6 589 46.2
Gohir.D12G125000 Gossypium hirsutum HOM05D004810 ORTHO05D006272 1.5e-127 461.8 909 36.2
Nitab4.5_0002994g0090 Nicotiana tabacum HOM05D004810 ORTHO05D006272 1.3e-126 458.8 1231 30.0
Migut.D00026 Erythranthe guttata HOM05D004810 ORTHO05D006272 2.9e-123 447.6 611 44.0
Oeu044753.1 Olea europaea HOM05D004810 ORTHO05D006272 2.1e-121 441.4 594 42.3
vmacro02367 Vaccinium macrocarpon HOM05D004810 ORTHO05D006272 7.8e-116 422.9 829 35.3
Pp3c3_23690 Physcomitrium patens HOM05D004810 ORTHO05D006272 2.3e-107 394.8 1274 29.0
Oeu044752.1 Olea europaea HOM05D004810 ORTHO05D006272 7.3e-106 389.8 617 39.7
SEGI_19859 Sequoiadendron giganteum HOM05D004810 ORTHO05D006272 1.5e-103 382.1 792 32.2
Mapoly0020s0127 Marchantia polymorpha HOM05D004810 ORTHO05D006272 1.7e-102 378.6 1259 27.6
CANSAT21G0194 Cannabis sativa HOM05D004810 ORTHO05D006272 2.8e-89 334.7 590 36.6
AUR62024565 Chenopodium quinoa HOM05D004810 ORTHO05D006272 3.1e-88 331.3 422 44.8
AagrBONN_evm.TU.Sc2ySwM_344.1995 Anthoceros agrestis HOM05D004810 ORTHO05D006272 2.6e-87 328.2 1105 25.9
Cpa.g.sc67.77 Carica papaya HOM05D004810 ORTHO05D006272 6.6e-83 313.5 493 40.6
Zm00001eb404090 Zea mays HOM05D004810 ORTHO05D006272 1.1e-82 312.8 597 36.0
FAN10G1333 Fragaria x ananassa HOM05D004810 ORTHO05D006272 2.0e-79 302.0 570 36.3
SEGI_21204 Sequoiadendron giganteum HOM05D004810 ORTHO05D006272 7.1e-77 293.5 580 34.1
vmacro02368 Vaccinium macrocarpon HOM05D004810 ORTHO05D006272 9.9e-71 273.1 587 34.1
SMO137G0268 Selaginella moellendorffii HOM05D004810 ORTHO05D006272 4.9e-62 244.2 916 26.3
SHI15445 Sapria himalayana HOM05D004810 ORTHO05D006272 4.8e-57 227.6 441 35.8
Dinv12097 Davidia involucrata HOM05D004810 ORTHO05D006272 3.8e-54 218.0 335 42.7
SHI15448 Sapria himalayana HOM05D000105 ORTHO05D000023 1.4e-53 216.1 325 40.0
MD17G1281400 Malus domestica HOM05D004810 ORTHO05D006272 3.7e-49 201.4 262 43.1
Psat4g129960 Pisum sativum HOM05D004810 ORTHO05D006272 7.2e-45 187.2 202 46.0
Solyc01g068070.4 Solanum lycopersicum HOM05D004810 ORTHO05D006272 2.0e-42 179.1 201 45.8
MD17G1281700 Malus domestica HOM05D004810 ORTHO05D006272 4.8e-41 174.5 269 39.4
SEGI_09896 Sequoiadendron giganteum HOM05D004810 ORTHO05D006272 9.1e-40 170.2 309 35.0
Cpa.g.sc3588.1 Carica papaya HOM05D004810 ORTHO05D006272 1.0e-38 166.8 256 42.6
RcHm_v2.0_Chr3g0486501 Rosa chinensis HOM05D004810 ORTHO05D006272 6.5e-38 164.1 244 41.4
MCO01G012 Micromonas commoda HOM05D004810 ORTHO05D006272 7.7e-23 114.0 559 24.0
MD17G1281300 Malus domestica HOM05D004810 ORTHO05D006272 4.0e-19 101.7 327 29.7
Psat0s2464g0040 Pisum sativum HOM05D004810 ORTHO05D006272 5.2e-19 101.3 105 50.5
CBR_g26439 Chara braunii HOM05D000019 ORTHO05D000002 4.4e-18 98.2 104 45.2
SHI15443 Sapria himalayana HOM05D004810 ORTHO05D006272 6.3e-17 94.4 241 30.3
SEGI_39451 Sequoiadendron giganteum HOM05D004810 ORTHO05D006272 2.4e-16 92.4 167 34.1
SEGI_37781 Sequoiadendron giganteum HOM05D004810 ORTHO05D006272 8.5e-14 84.0 135 38.5
Psat0s3766g0080 Pisum sativum HOM05D002292 ORTHO05D006272 6.8e-11 74.3 59 49.2
PRCOL_00001957 Prasinoderma coloniale HOM05D004810 ORTHO05D006272 1.2e-10 73.6 255 24.3
Lsat_1_v5_gn_2_51680 Lactuca sativa HOM05D004810 ORTHO05D006272 9.8e-10 70.5 110 35.5
SHI15450 Sapria himalayana HOM05D000105 ORTHO05D000023 9.8e-10 70.5 157 32.5
RcHm_v2.0_Chr3g0486511 Rosa chinensis HOM05D004810 ORTHO05D006272 2.8e-09 68.9 41 63.4
MBI14_g40313_MAGBIO Magnolia biondii HOM05D004810 ORTHO05D020845 4.9e-09 68.2 47 63.8
MBI15_g23571_MAGBIO Magnolia biondii HOM05D004810 ORTHO05D020845 4.9e-09 68.2 47 63.8
MBI14_g17170_MAGBIO Magnolia biondii HOM05D004810 ORTHO05D020845 6.3e-09 67.8 47 63.8
MBI13_g10212_MAGBIO Magnolia biondii HOM05D004810 ORTHO05D020845 7.0e-08 64.3 47 61.7
MBI19_g30553_MAGBIO Magnolia biondii HOM05D004810 ORTHO05D020845 9.2e-08 63.9 48 62.5
RcHm_v2.0_Chr3g0486521 Rosa chinensis HOM05D004810 ORTHO05D006272 1.6e-07 63.2 40 70.0
Atru.chr5.900 Acer truncatum HOM05D004810 ORTHO05D006272 2.7e-07 62.4 35 80.0


User provided reference genes

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