Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_62.g23891 Utricularia gibba HOM05D005532 ORTHO05D006873 1.0e-193 679.9 337 100.0
unitig_52.g16880 Utricularia gibba HOM05D005532 ORTHO05D006873 5.7e-152 541.2 334 81.1
Migut.D00633 Erythranthe guttata HOM05D005532 ORTHO05D006873 4.4e-136 488.4 334 71.9
Oeu043291.1 Olea europaea HOM05D005532 ORTHO05D006873 1.7e-135 486.5 334 71.0
SGA_v2.0_scaffold29G12299 Striga asiatica HOM05D005532 ORTHO05D006873 6.3e-135 484.6 334 69.8
Nitab4.5_0011829g0040 Nicotiana tabacum HOM05D005532 ORTHO05D006873 9.1e-134 480.7 334 71.6
PGSC0003DMG400038188 Solanum tuberosum HOM05D005532 ORTHO05D006873 1.2e-133 480.3 334 70.7
GSVIVG01031546001 Vitis vinifera HOM05D005532 ORTHO05D006873 3.5e-133 478.8 334 69.2
Sopen11g024960 Solanum pennellii HOM05D005532 ORTHO05D006873 7.7e-133 477.6 334 70.1
CAN.G870.1 Capsicum annuum HOM05D005532 ORTHO05D006873 2.2e-132 476.1 334 70.7
CSS0007885 Camellia sinensis var. sinensis HOM05D005532 ORTHO05D006873 2.9e-132 475.7 332 69.6
Dinv36220 Davidia involucrata HOM05D005532 ORTHO05D006873 2.9e-132 475.7 334 68.9
CiPaw.13G154000 Carya illinoinensis HOM05D005532 ORTHO05D006873 3.8e-132 475.3 334 69.5
Solyc11g065240.2 Solanum lycopersicum HOM05D005532 ORTHO05D006873 3.8e-132 475.3 334 70.1
TWI60G0905 Tripterygium wilfordii HOM05D005532 ORTHO05D006873 8.5e-132 474.2 334 68.6
Actinidia23981 Actinidia chinensis HOM05D005532 ORTHO05D006873 1.1e-131 473.8 334 68.6
COL.COLO4_36473 Corchorus olitorius HOM05D005532 ORTHO05D006873 1.1e-131 473.8 334 68.9
Lalb_Chr19g0139721 Lupinus albus HOM05D005532 ORTHO05D006873 1.9e-131 473.0 334 69.5
Actinidia11667 Actinidia chinensis HOM05D005532 ORTHO05D006873 5.5e-131 471.5 332 69.0
Cpa.g.sc892.3 Carica papaya HOM05D005532 ORTHO05D006873 5.5e-131 471.5 334 69.2
Cfa009820 Carpinus fangiana HOM05D005532 ORTHO05D006873 2.1e-130 469.5 336 68.8
Thecc.09G240600 Theobroma cacao HOM05D005532 ORTHO05D006873 2.1e-130 469.5 334 69.2
Duzib168G1386 Durio zibethinus HOM05D005532 ORTHO05D006873 4.7e-130 468.4 334 68.9
Nn7g36397 Nelumbo nucifera HOM05D005532 ORTHO05D006873 6.1e-130 468.0 334 68.0
Manes.14G005300 Manihot esculenta HOM05D005532 ORTHO05D006873 1.4e-129 466.8 334 68.0
PGR119G0320 Punica granatum HOM05D005532 ORTHO05D006873 3.0e-129 465.7 334 67.4
Atru.chr3.2637 Acer truncatum HOM05D005532 ORTHO05D006873 4.0e-129 465.3 334 69.5
HanXRQChr13g0401441 Helianthus annuus HOM05D005532 ORTHO05D006873 5.2e-129 464.9 334 68.0
Lj3g0021729 Lotus japonicus HOM05D005532 ORTHO05D006873 6.8e-129 464.5 334 68.0
Aqoxy2G00249 Aquilegia oxysepala HOM05D005532 ORTHO05D006873 1.5e-128 463.4 334 68.3
TAR636G1137 Trochodendron aralioides HOM05D005532 ORTHO05D006873 1.5e-128 463.4 334 67.4
Glyma.12G021500 Glycine max HOM05D005532 ORTHO05D006873 2.6e-128 462.6 334 67.7
arahy.Tifrunner.gnm1.ann1.3FY9NR Arachis hypogaea HOM05D005532 ORTHO05D006873 3.4e-128 462.2 335 67.8
MD11G1188300 Malus domestica HOM05D005532 ORTHO05D006873 3.4e-128 462.2 334 67.7
Phvul.011G078100 Phaseolus vulgaris HOM05D005532 ORTHO05D006873 3.4e-128 462.2 334 68.0
arahy.Tifrunner.gnm1.ann1.7Y4SN4 Arachis hypogaea HOM05D005532 ORTHO05D006873 4.4e-128 461.8 335 68.4
HanXRQChr02g0051521 Helianthus annuus HOM05D005532 ORTHO05D006873 9.8e-128 460.7 334 66.8
ECA233G0258 Erigeron canadensis HOM05D005532 ORTHO05D006873 1.3e-127 460.3 334 67.1
Potri.009G050100 Populus trichocarpa HOM05D005532 ORTHO05D006873 1.3e-127 460.3 334 66.8
Cc01_g02130 Coffea canephora HOM05D005532 ORTHO05D006873 2.2e-127 459.5 334 67.4
VMungo1127G1594 Vigna mungo HOM05D005532 ORTHO05D006873 8.3e-127 457.6 334 67.1
Ciclev10015321m.g Citrus clementina HOM05D005532 ORTHO05D006873 1.1e-126 457.2 334 68.6
Thhalv10011503m.g Eutrema salsugineum HOM05D005532 ORTHO05D006873 1.1e-126 457.2 334 66.2
Gorai.001G136900 Gossypium raimondii HOM05D005532 ORTHO05D006873 1.1e-126 457.2 334 67.7
Gohir.D07G126700 Gossypium hirsutum HOM05D005532 ORTHO05D006873 2.4e-126 456.1 334 67.4
THA.LOC104821584 Tarenaya hassleriana HOM05D005532 ORTHO05D006873 4.1e-126 455.3 334 66.5
Medtr4g076230 Medicago truncatula HOM05D005532 ORTHO05D006873 9.1e-126 454.1 336 66.7
TPR.G22568 Trifolium pratense HOM05D005532 ORTHO05D006873 1.2e-125 453.8 334 67.1
CANSAT54G2729 Cannabis sativa HOM05D005532 ORTHO05D006873 2.0e-125 453.0 334 66.5
Lj1A319T38 Lonicera japonica HOM05D005532 ORTHO05D006873 2.0e-125 453.0 372 61.3
PSO339G2797 Papaver somniferum HOM05D005532 ORTHO05D006873 2.0e-125 453.0 334 65.6
Carub.0001s3953 Capsella rubella HOM05D005532 ORTHO05D006873 5.9e-125 451.4 334 65.6
RcHm_v2.0_Chr5g0053381 Rosa chinensis HOM05D005532 ORTHO05D006873 5.9e-125 451.4 334 65.9
Lsat_1_v5_gn_6_26061 Lactuca sativa HOM05D005532 ORTHO05D006873 7.7e-125 451.1 334 64.7
AT1G50450 Arabidopsis thaliana HOM05D005532 ORTHO05D006873 1.3e-124 450.3 334 65.3
BcaC08g43214 Brassica carinata HOM05D005532 ORTHO05D006873 1.7e-124 449.9 334 64.7
FvH4_3g28350 Fragaria vesca HOM05D005532 ORTHO05D006873 1.7e-124 449.9 334 65.6
FAN16G3415 Fragaria x ananassa HOM05D005532 ORTHO05D006873 1.7e-124 449.9 334 65.6
FAN21G2390 Fragaria x ananassa HOM05D005532 ORTHO05D006873 1.7e-124 449.9 334 65.3
FAN25G0557 Fragaria x ananassa HOM05D005532 ORTHO05D006873 1.7e-124 449.9 334 65.6
Eucgr.J00735 Eucalyptus grandis HOM05D005532 ORTHO05D006873 2.2e-124 449.5 334 66.5
AUR62000162 Chenopodium quinoa HOM05D005532 ORTHO05D006873 2.9e-124 449.1 325 66.8
PSO384G4693 Papaver somniferum HOM05D005532 ORTHO05D006873 2.9e-124 449.1 334 65.6
RhsimUnG0131400 Rhododendron simsii HOM05D005532 ORTHO05D006873 2.9e-124 449.1 343 66.2
Sp1g37280 Schrenkiella parvula HOM05D005532 ORTHO05D006873 2.9e-124 449.1 334 64.7
Sed0019503 Sechium edule HOM05D005532 ORTHO05D006873 3.8e-124 448.7 334 66.5
Prupe.4G256000 Prunus persica HOM05D005532 ORTHO05D006873 5.0e-124 448.4 334 66.8
AL1G58090 Arabidopsis lyrata HOM05D005532 ORTHO05D006873 6.5e-124 448.0 334 65.3
AUR62039851 Chenopodium quinoa HOM05D005532 ORTHO05D006873 1.9e-123 446.4 325 66.2
Os12g0137200 Oryza sativa ssp. japonica HOM05D005532 ORTHO05D006873 5.5e-123 444.9 334 64.1
MELO3C014575.2 Cucumis melo HOM05D005532 ORTHO05D006873 9.4e-123 444.1 334 65.6
BcaB07g33482 Brassica carinata HOM05D005532 ORTHO05D006873 1.2e-122 443.7 334 64.1
Rhsim01G0193400 Rhododendron simsii HOM05D005532 ORTHO05D006873 2.7e-122 442.6 354 63.3
Hma1.2p1_2169F.1_g315920 Hydrangea macrophylla HOM05D005532 ORTHO05D006873 3.6e-122 442.2 318 68.6
Hund07456 Selenicereus undatus HOM05D005532 ORTHO05D006873 4.7e-122 441.8 334 66.2
Zm00001eb093270 Zea mays HOM05D005532 ORTHO05D006873 4.7e-122 441.8 334 65.3
Haze_23183 Corylus avellana HOM05D005532 ORTHO05D006873 3.0e-121 439.1 387 59.4
Psat7g179480 Pisum sativum HOM05D005532 ORTHO05D006873 3.0e-121 439.1 368 62.5
C06p05640 Brassica napus HOM05D005532 ORTHO05D006873 3.4e-120 435.6 334 63.5
BolC6t35671H Brassica oleracea HOM05D005532 ORTHO05D006873 3.4e-120 435.6 334 63.5
Aa31LG10G3830 Aethionema arabicum HOM05D005532 ORTHO05D006873 1.3e-119 433.7 334 64.7
BraA06t23525Z Brassica rapa HOM05D005532 ORTHO05D006873 1.3e-119 433.7 334 63.5
A06p03120 Brassica napus HOM05D005532 ORTHO05D006873 1.7e-119 433.3 334 63.5
EL10Ac4g10189 Beta vulgaris HOM05D005532 ORTHO05D006873 2.2e-119 433.0 349 63.9
Aa31LG10G3840 Aethionema arabicum HOM05D005532 ORTHO05D006873 1.8e-118 429.9 335 61.2
Nitab4.5_0005230g0080 Nicotiana tabacum HOM05D005532 ORTHO05D006873 1.8e-118 429.9 334 66.5
AUR62039849 Chenopodium quinoa HOM05D005532 ORTHO05D006873 7.0e-118 427.9 308 67.9
HPP92_011271 Vanilla planifolia HOM05D005532 ORTHO05D006873 2.7e-117 426.0 334 62.3
HPP92_011292 Vanilla planifolia HOM05D005532 ORTHO05D006873 2.7e-117 426.0 330 63.0
arahy.Tifrunner.gnm1.ann1.PT8LN6 Arachis hypogaea HOM05D005532 ORTHO05D006873 2.3e-116 422.9 335 61.2
Glyma.11G095400 Glycine max HOM05D005532 ORTHO05D006873 2.3e-116 422.9 308 67.2
Sabra09G0036700 Salix brachista HOM05D005532 ORTHO05D006873 7.2e-115 417.9 308 65.6
CDE04G2597 Ceratophyllum demersum HOM05D005532 ORTHO05D006873 4.0e-113 412.1 334 61.1
Haze_23184 Corylus avellana HOM05D005532 ORTHO05D006873 5.7e-112 408.3 335 62.7
Hund07457 Selenicereus undatus HOM05D005532 ORTHO05D006873 1.3e-111 407.1 317 64.4
vmacro14267 Vaccinium macrocarpon HOM05D005532 ORTHO05D006873 9.2e-110 401.0 367 58.6
Peaxi162Scf00004g00378 Petunia axillaris HOM05D005532 ORTHO05D006873 1.2e-109 400.6 282 70.6
Lsat_1_v5_gn_6_26080 Lactuca sativa HOM05D005532 ORTHO05D006873 5.9e-109 398.3 334 56.6
AagrBONN_evm.TU.Sc2ySwM_117.1967 Anthoceros agrestis HOM05D005532 ORTHO05D006873 2.8e-106 389.4 335 58.2
ClCG02G023050 Citrullus lanatus HOM05D005532 ORTHO05D006873 4.7e-106 388.7 367 56.7
Mapoly0066s0102 Marchantia polymorpha HOM05D005532 ORTHO05D006873 1.2e-104 384.0 335 56.1
DCAR_023774 Daucus carota HOM05D005532 ORTHO05D006873 3.4e-104 382.5 334 58.4
Sc09g0000860 Simmondsia chinensis HOM05D005532 ORTHO05D006873 2.5e-99 366.3 260 68.1
Gohir.A07G122800 Gossypium hirsutum HOM05D005532 ORTHO05D006873 9.5e-99 364.4 269 67.3
Ah.04g162030 Amaranthus hybridus HOM05D005532 ORTHO05D006873 1.1e-94 350.9 334 55.4
SMO367G1041 Selaginella moellendorffii HOM05D005532 ORTHO05D006873 3.0e-92 342.8 334 52.4
CARHR040460 Cardamine hirsuta HOM05D005532 ORTHO05D006873 1.4e-89 334.0 280 60.0
ATR0721G047 Amborella trichopoda HOM05D005532 ORTHO05D006873 3.1e-81 306.2 236 61.9
Sc09g0000870 Simmondsia chinensis HOM05D005532 ORTHO05D006873 4.0e-81 305.8 225 66.2
Cre16.g666050 Chlamydomonas reinhardtii HOM05D005532 ORTHO05D006873 1.2e-80 304.3 343 48.4
QL01p018283 Quercus lobata HOM05D005532 ORTHO05D006873 7.6e-80 301.6 277 56.7
Pp3c19_6050 Physcomitrium patens HOM05D005532 ORTHO05D006873 4.9e-79 298.9 280 56.1
CsaV3_6G039150 Cucumis sativus L. HOM05D005532 ORTHO05D006873 1.2e-77 294.3 224 65.2
MBI05_g22559_MAGBIO Magnolia biondii HOM05D005532 ORTHO05D006873 9.3e-70 268.1 199 65.3
MCO10G311 Micromonas commoda HOM05D005532 ORTHO05D006873 1.6e-69 267.3 330 43.9
SGA_v2.0_scaffold29G12269 Striga asiatica HOM05D005532 ORTHO05D006873 2.1e-66 256.9 331 42.3
arahy.Tifrunner.gnm1.ann1.MM015B Arachis hypogaea HOM05D005532 ORTHO05D006873 1.6e-50 204.1 151 64.2
Migut.D00646 Erythranthe guttata HOM05D005532 ORTHO05D006873 1.4e-49 201.1 189 53.4
PRCOL_00003498 Prasinoderma coloniale HOM05D005532 ORTHO05D006873 5.1e-44 182.6 318 34.6
CBR_g3868 Chara braunii HOM05D000019 ORTHO05D000048 6.9e-41 172.2 169 53.8
arahy.Tifrunner.gnm1.ann1.E0YEAW Arachis hypogaea HOM05D005532 ORTHO05D006873 1.5e-40 171.0 179 52.0
CsaV3_6G039160 Cucumis sativus L. HOM05D005532 ORTHO05D006873 2.5e-35 153.7 109 66.1
CSS0040461 Camellia sinensis var. sinensis HOM05D005532 ORTHO05D006873 1.7e-31 141.0 101 67.3
SalBow6G6953 Salvia bowleyana HOM05D005532 ORTHO05D006873 1.7e-31 141.0 99 68.7
arahy.Tifrunner.gnm1.ann1.C2XCQ2 Arachis hypogaea HOM05D005532 ORTHO05D006873 1.4e-30 137.9 97 69.1
SEGI_01123 Sequoiadendron giganteum HOM05D005532 ORTHO05D006873 1.5e-22 111.3 103 60.2
PRCOL_00002357 Prasinoderma coloniale HOM05D005532 ORTHO05D006873 4.7e-21 106.3 359 28.7
HanXRQChr09g0270661 Helianthus annuus HOM05D000715 ORTHO05D000024 1.4e-20 104.8 84 59.5
SEGI_35247 Sequoiadendron giganteum HOM05D005532 ORTHO05D006873 2.0e-16 90.9 61 65.6
Ciclev10017011m.g Citrus clementina HOM05D005532 ORTHO05D006873 4.5e-16 89.7 71 62.0
Os11g0140700 Oryza sativa ssp. japonica HOM05D005532 ORTHO05D006873 8.0e-13 79.0 56 67.9
TPR.G22569 Trifolium pratense HOM05D005532 ORTHO05D006873 1.4e-09 68.2 55 61.8
HanXRQChr13g0403791 Helianthus annuus HOM05D005532 ORTHO05D006873 4.1e-09 66.6 53 58.5
GSVIVG01003967001 Vitis vinifera HOM05D003363 ORTHO05D003952 1.3e-07 61.6 56 51.8


User provided reference genes

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