Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_62.g23866 Utricularia gibba HOM05D006407 ORTHO05D008079 7.2e-170 600.5 306 100.0
unitig_64.g29771 Utricularia gibba HOM05D006407 ORTHO05D008079 8.3e-134 480.7 308 83.4
MSTRG.18495 Avicennia marina HOM05D006407 ORTHO05D008079 7.8e-92 341.3 352 55.7
CSS0036527 Camellia sinensis var. sinensis HOM05D006407 ORTHO05D008079 9.0e-88 327.8 350 54.3
SalBow6G2639 Salvia bowleyana HOM05D006407 ORTHO05D008079 1.2e-87 327.4 353 54.4
Migut.D00736 Erythranthe guttata HOM05D006407 ORTHO05D008079 1.7e-86 323.6 353 55.2
CSS0030734 Camellia sinensis var. sinensis HOM05D006407 ORTHO05D008079 2.2e-86 323.2 350 53.7
Oeu057833.1 Olea europaea HOM05D006407 ORTHO05D008079 1.1e-85 320.9 360 53.6
Hma1.2p1_0161F.1_g071410 Hydrangea macrophylla HOM05D006407 ORTHO05D008079 3.2e-85 319.3 311 58.2
Dinv28811 Davidia involucrata HOM05D006407 ORTHO05D008079 9.3e-85 317.8 355 53.2
Nitab4.5_0003859g0020 Nicotiana tabacum HOM05D001236 ORTHO05D001090 2.7e-84 316.2 281 62.3
Peaxi162Scf00335g00087 Petunia axillaris HOM05D006407 ORTHO05D008079 4.6e-84 315.5 280 62.9
Nitab4.5_0000038g0130 Nicotiana tabacum HOM05D006407 ORTHO05D008079 1.0e-83 314.3 297 59.6
TAR636G1997 Trochodendron aralioides HOM05D006407 ORTHO05D008079 1.3e-83 313.9 357 52.1
Rhsim13G0052700 Rhododendron simsii HOM05D006407 ORTHO05D008079 3.0e-83 312.8 296 58.1
Thecc.01G211000 Theobroma cacao HOM05D006407 ORTHO05D008079 5.1e-83 312.0 288 59.7
Sopen09g019480 Solanum pennellii HOM05D006407 ORTHO05D008079 8.7e-83 311.2 276 63.4
Cpa.g.sc8.72 Carica papaya HOM05D006407 ORTHO05D008079 1.5e-82 310.5 290 59.7
GSVIVG01006226001 Vitis vinifera HOM05D006407 ORTHO05D008079 1.5e-82 310.5 281 63.0
Gohir.A07G159200 Gossypium hirsutum HOM05D006407 ORTHO05D008079 1.9e-82 310.1 288 59.7
BcaB04g19579 Brassica carinata HOM05D006407 ORTHO05D008079 2.5e-82 309.7 291 59.8
BcaC04g23774 Brassica carinata HOM05D006407 ORTHO05D008079 3.3e-82 309.3 351 52.7
C09p04840 Brassica napus HOM05D006407 ORTHO05D008079 3.3e-82 309.3 351 52.7
BolC9t53411H Brassica oleracea HOM05D006407 ORTHO05D008079 3.3e-82 309.3 351 52.7
BraA09t36088Z Brassica rapa HOM05D006407 ORTHO05D008079 4.3e-82 308.9 351 52.7
Cc01_g16130 Coffea canephora HOM05D006407 ORTHO05D008079 4.3e-82 308.9 286 59.8
Eucgr.H00725 Eucalyptus grandis HOM05D006407 ORTHO05D008079 4.3e-82 308.9 287 59.9
PGSC0003DMG400013943 Solanum tuberosum HOM05D006407 ORTHO05D008079 4.3e-82 308.9 276 63.0
Actinidia30017 Actinidia chinensis HOM05D006407 ORTHO05D008079 5.6e-82 308.5 284 60.9
A09p04530 Brassica napus HOM05D006407 ORTHO05D008079 5.6e-82 308.5 351 52.7
Haze_03500 Corylus avellana HOM05D006407 ORTHO05D008079 1.3e-81 307.4 354 52.0
Gohir.D07G167200 Gossypium hirsutum HOM05D006407 ORTHO05D008079 1.3e-81 307.4 281 60.5
Gorai.N003300 Gossypium raimondii HOM05D006407 ORTHO05D008079 1.3e-81 307.4 281 60.5
PGR083G0415 Punica granatum HOM05D006407 ORTHO05D008079 1.3e-81 307.4 288 60.4
QL09p046404 Quercus lobata HOM05D006407 ORTHO05D008079 1.3e-81 307.4 283 60.8
Lj1C101T0 Lonicera japonica HOM05D006407 ORTHO05D008079 2.1e-81 306.6 266 63.5
PSO675G1275 Papaver somniferum HOM05D006407 ORTHO05D008079 2.8e-81 306.2 295 59.0
THA.LOC104802645 Tarenaya hassleriana HOM05D006407 ORTHO05D008079 2.8e-81 306.2 299 57.9
Carub.0008s0805 Capsella rubella HOM05D006407 ORTHO05D008079 3.6e-81 305.8 291 58.8
CiPaw.14G043600 Carya illinoinensis HOM05D006407 ORTHO05D008079 4.8e-81 305.4 290 59.0
Manes.12G054200 Manihot esculenta HOM05D006407 ORTHO05D008079 6.2e-81 305.1 295 58.3
AT5G48470 Arabidopsis thaliana HOM05D006407 ORTHO05D008079 8.1e-81 304.7 291 58.4
Solyc09g056160.4 Solanum lycopersicum HOM05D006407 ORTHO05D008079 8.1e-81 304.7 276 62.0
Sp2g18840 Schrenkiella parvula HOM05D006407 ORTHO05D008079 1.1e-80 304.3 343 53.6
SGA_v2.0_scaffold29G12072 Striga asiatica HOM05D006407 ORTHO05D008079 1.1e-80 304.3 409 48.7
Thhalv10004357m.g Eutrema salsugineum HOM05D006407 ORTHO05D008079 1.8e-80 303.5 292 58.6
PSO017G7241 Papaver somniferum HOM05D006407 ORTHO05D008079 1.8e-80 303.5 294 58.8
Phvul.008G108300 Phaseolus vulgaris HOM05D006407 ORTHO05D008079 3.1e-80 302.8 347 52.4
Cfa010568 Carpinus fangiana HOM05D006407 ORTHO05D008079 4.0e-80 302.4 350 51.7
Aqoxy2G03962 Aquilegia oxysepala HOM05D006407 ORTHO05D008079 5.3e-80 302.0 287 59.6
Prupe.8G190300 Prunus persica HOM05D006407 ORTHO05D008079 5.3e-80 302.0 268 61.9
Ah.11g051020 Amaranthus hybridus HOM05D006407 ORTHO05D008079 6.9e-80 301.6 282 59.6
TWI36G1400 Tripterygium wilfordii HOM05D006407 ORTHO05D008079 9.0e-80 301.2 290 60.3
Lsat_1_v5_gn_9_16300 Lactuca sativa HOM05D006407 ORTHO05D008079 1.2e-79 300.8 313 56.2
Aa31sc527G10 Aethionema arabicum HOM05D006407 ORTHO05D008079 1.5e-79 300.4 291 57.7
Sc17g0001660 Simmondsia chinensis HOM05D006407 ORTHO05D008079 1.5e-79 300.4 299 58.2
CsaV3_7G026830 Cucumis sativus L. HOM05D006407 ORTHO05D008079 2.0e-79 300.1 284 59.5
Hund02795 Selenicereus undatus HOM05D006407 ORTHO05D008079 2.0e-79 300.1 278 61.2
AL8G21320 Arabidopsis lyrata HOM05D006407 ORTHO05D008079 2.6e-79 299.7 291 58.1
EL10Ac5g10625 Beta vulgaris HOM05D006407 ORTHO05D008079 1.3e-78 297.4 360 51.7
Ciclev10015489m.g Citrus clementina HOM05D006407 ORTHO05D008079 1.7e-78 297.0 292 57.5
Potri.002G251400 Populus trichocarpa HOM05D006407 ORTHO05D008079 2.2e-78 296.6 291 57.0
FAN15G1719 Fragaria x ananassa HOM05D006407 ORTHO05D008079 2.9e-78 296.2 349 51.9
MD10G1151900 Malus domestica HOM05D006407 ORTHO05D008079 2.9e-78 296.2 284 58.8
arahy.Tifrunner.gnm1.ann1.FHDW0K Arachis hypogaea HOM05D006407 ORTHO05D008079 4.9e-78 295.4 312 55.8
arahy.Tifrunner.gnm1.ann1.Q8L9VW Arachis hypogaea HOM05D006407 ORTHO05D008079 8.4e-78 294.7 336 53.0
Sed0008140 Sechium edule HOM05D006407 ORTHO05D008079 8.4e-78 294.7 289 57.1
TWI18G0256 Tripterygium wilfordii HOM05D006407 ORTHO05D008079 8.4e-78 294.7 290 59.3
RcHm_v2.0_Chr6g0282821 Rosa chinensis HOM05D006407 ORTHO05D008079 1.9e-77 293.5 285 58.2
CANSAT01G1280 Cannabis sativa HOM05D006407 ORTHO05D008079 3.2e-77 292.7 286 58.7
ECA247G2281 Erigeron canadensis HOM05D006407 ORTHO05D008079 3.2e-77 292.7 285 57.9
HanXRQChr08g0231421 Helianthus annuus HOM05D006407 ORTHO05D008079 3.2e-77 292.7 312 55.8
Glyma.03G089700 Glycine max HOM05D006407 ORTHO05D008079 4.2e-77 292.4 276 60.5
ClCG09G008210 Citrullus lanatus HOM05D006407 ORTHO05D008079 5.4e-77 292.0 357 50.1
Glyma.16G083300 Glycine max HOM05D006407 ORTHO05D008079 5.4e-77 292.0 276 59.8
Lalb_Chr07g0194511 Lupinus albus HOM05D006407 ORTHO05D008079 1.2e-76 290.8 268 60.4
HPP92_024258 Vanilla planifolia HOM05D006407 ORTHO05D008079 1.6e-76 290.4 326 53.1
FvH4_2g17800 Fragaria vesca HOM05D006407 ORTHO05D008079 2.7e-76 289.7 349 51.0
Medtr1g007490 Medicago truncatula HOM05D006407 ORTHO05D008079 3.5e-76 289.3 289 57.8
FAN27G2095 Fragaria x ananassa HOM05D006407 ORTHO05D008079 4.6e-76 288.9 285 57.9
FAN27G3088 Fragaria x ananassa HOM05D006407 ORTHO05D008079 4.6e-76 288.9 285 57.9
Psat6g036520 Pisum sativum HOM05D006407 ORTHO05D008079 6.0e-76 288.5 290 57.9
FAN24G2889 Fragaria x ananassa HOM05D006407 ORTHO05D008079 7.9e-76 288.1 349 50.7
vmacro02816 Vaccinium macrocarpon HOM05D006407 ORTHO05D008079 3.0e-75 286.2 344 50.0
AUR62008121 Chenopodium quinoa HOM05D006407 ORTHO05D008079 8.7e-75 284.6 301 55.8
Lj1g0005258 Lotus japonicus HOM05D006407 ORTHO05D008079 1.5e-74 283.9 281 58.4
Atru.chr6.3545 Acer truncatum HOM05D006407 ORTHO05D008079 3.3e-74 282.7 262 59.9
Os11g0425300 Oryza sativa ssp. japonica HOM05D006407 ORTHO05D008079 4.3e-74 282.3 287 55.4
ATR0686G167 Amborella trichopoda HOM05D006407 ORTHO05D008079 1.3e-73 280.8 287 54.7
CARHR183610 Cardamine hirsuta HOM05D006407 ORTHO05D008079 1.3e-73 280.8 241 61.8
Zm00001eb169280 Zea mays HOM05D006407 ORTHO05D008079 1.6e-73 280.4 287 54.7
Nn1g08257 Nelumbo nucifera HOM05D006407 ORTHO05D008079 2.4e-72 276.6 161 83.9
Ca_12772_v3 Cicer arietinum L. HOM05D006407 ORTHO05D008079 2.9e-70 269.6 260 57.7
Sabra02G0191100 Salix brachista HOM05D006407 ORTHO05D008079 2.9e-70 269.6 293 53.9
COL.COLO4_26571 Corchorus olitorius HOM05D006407 ORTHO05D008079 3.3e-66 256.1 295 51.9
VMungo1383G2551 Vigna mungo HOM05D006407 ORTHO05D008079 2.1e-60 236.9 347 45.0
SEGI_39839 Sequoiadendron giganteum HOM05D006407 ORTHO05D008079 4.6e-60 235.7 276 49.3
MBI11_g07407_MAGBIO Magnolia biondii HOM05D006407 ORTHO05D003073 6.1e-60 235.3 141 82.3
Pp3c19_21450 Physcomitrium patens HOM05D006407 ORTHO05D008079 7.2e-45 185.3 289 37.7
CDE09G0438 Ceratophyllum demersum HOM05D006407 ORTHO05D008079 6.7e-43 178.7 211 51.7
BcaC06g30794 Brassica carinata HOM05D006407 ORTHO05D008079 4.4e-42 176.0 188 53.7
CBR_g12604 Chara braunii HOM05D001724 ORTHO05D007284 1.3e-41 174.5 191 47.6
SMO367G1011 Selaginella moellendorffii HOM05D006407 ORTHO05D008079 2.2e-41 173.7 280 37.1
AagrBONN_evm.TU.Sc2ySwM_368.2294 Anthoceros agrestis HOM05D006407 ORTHO05D008079 8.2e-41 171.8 237 40.5
Migut.D00733 Erythranthe guttata HOM05D006407 ORTHO05D008079 7.0e-40 168.7 104 83.7
Mapoly0125s0038 Marchantia polymorpha HOM05D006407 ORTHO05D008079 9.1e-40 168.3 229 41.0
C07p39170 Brassica napus HOM05D006407 ORTHO05D008079 1.1e-37 161.4 241 46.5
BolC7t44437H Brassica oleracea HOM05D006407 ORTHO05D008079 1.9e-37 160.6 261 44.4
A06p39160 Brassica napus HOM05D006407 ORTHO05D008079 2.2e-25 120.6 137 50.4
HPP92_024262 Vanilla planifolia HOM05D006407 ORTHO05D008079 1.4e-24 117.9 163 43.6
Duzib138G1048 Durio zibethinus HOM05D006407 ORTHO05D008079 3.1e-24 116.7 139 48.2
CDE02G0544 Ceratophyllum demersum HOM05D006407 ORTHO05D008079 2.0e-23 114.0 82 70.7
Lsat_1_v5_gn_9_60420 Lactuca sativa HOM05D001780 ORTHO05D008079 1.7e-14 84.3 46 89.1
Nn1g08232 Nelumbo nucifera HOM05D006407 ORTHO05D008079 4.7e-12 76.3 82 54.9
MD05G1159200 Malus domestica HOM05D006407 ORTHO05D008079 1.4e-11 74.7 49 71.4
DCAR_004768 Daucus carota HOM05D006407 ORTHO05D008079 1.7e-09 67.8 77 50.6
BraA06t26831Z Brassica rapa HOM05D006407 ORTHO05D008079 2.2e-09 67.4 78 48.7
MCO11G451 Micromonas commoda HOM05D006407 ORTHO05D008079 8.3e-09 65.5 191 27.2
arahy.Tifrunner.gnm1.ann1.91BFZF Arachis hypogaea HOM05D006407 ORTHO05D008079 1.8e-08 64.3 73 52.1
AUR62028699 Chenopodium quinoa HOM05D006407 ORTHO05D008079 7.8e-07 58.9 75 48.0


User provided reference genes

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