Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_62.g23800 Utricularia gibba HOM05D001384 ORTHO05D001215 6.6e-52 207.2 114 100.0
unitig_899.g14812 Utricularia gibba HOM05D001384 ORTHO05D001215 1.3e-10 70.1 73 63.0
unitig_736.g22817 Utricularia gibba HOM05D001384 ORTHO05D001215 2.1e-10 69.3 78 60.3
TAR375G0324 Trochodendron aralioides HOM05D001384 ORTHO05D001215 1.4e-09 66.6 75 52.0
AT3G61640 Arabidopsis thaliana HOM05D001384 ORTHO05D001215 1.8e-09 66.2 71 50.7
COL.COLO4_06332 Corchorus olitorius HOM05D001384 ORTHO05D001215 5.3e-09 64.7 75 48.0
Dinv32554 Davidia involucrata HOM05D001384 ORTHO05D001215 5.3e-09 64.7 73 56.2
CsaV3_3G008420 Cucumis sativus L. HOM05D001384 ORTHO05D001215 9.0e-09 63.9 67 52.2
Duzib133G0751 Durio zibethinus HOM05D001384 ORTHO05D001215 9.0e-09 63.9 71 50.7
Thecc.01G347500 Theobroma cacao HOM05D001384 ORTHO05D001215 1.2e-08 63.5 71 49.3
Gohir.A12G110700 Gossypium hirsutum HOM05D001384 ORTHO05D001215 1.5e-08 63.2 68 51.5
Gohir.D12G114000 Gossypium hirsutum HOM05D001384 ORTHO05D001215 1.5e-08 63.2 68 51.5
TAR636G2986 Trochodendron aralioides HOM05D001384 ORTHO05D001215 1.5e-08 63.2 75 54.7
BcaB01g03229 Brassica carinata HOM05D001384 ORTHO05D001215 2.0e-08 62.8 71 52.1
BcaC01g05082 Brassica carinata HOM05D001384 ORTHO05D001215 2.0e-08 62.8 70 52.9
A03p25570 Brassica napus HOM05D001384 ORTHO05D001215 2.0e-08 62.8 71 52.1
BraA03t11773Z Brassica rapa HOM05D001384 ORTHO05D001215 2.0e-08 62.8 71 52.1
AL4G45630 Arabidopsis lyrata HOM05D001384 ORTHO05D001215 2.6e-08 62.4 71 52.1
AT2G46330 Arabidopsis thaliana HOM05D001384 ORTHO05D001215 2.6e-08 62.4 71 52.1
C03p30500 Brassica napus HOM05D001384 ORTHO05D001215 2.6e-08 62.4 71 52.1
Actinidia20196 Actinidia chinensis HOM05D001384 ORTHO05D001215 3.4e-08 62.0 122 43.4
Carub.0004s2903 Capsella rubella HOM05D001384 ORTHO05D001215 3.4e-08 62.0 71 52.1
Gohir.A10G199650 Gossypium hirsutum HOM05D001384 ORTHO05D001215 3.4e-08 62.0 71 49.3
Gohir.D11G099700 Gossypium hirsutum HOM05D001384 ORTHO05D001215 3.4e-08 62.0 71 49.3
Gorai.007G105900 Gossypium raimondii HOM05D001384 ORTHO05D001215 3.4e-08 62.0 71 49.3
BcaC01g05077 Brassica carinata HOM05D001384 ORTHO05D001215 4.5e-08 61.6 71 52.1
THA.LOC104817336 Tarenaya hassleriana HOM05D001384 ORTHO05D001215 4.5e-08 61.6 72 50.0
Duzib138G1328 Durio zibethinus HOM05D001384 ORTHO05D001215 5.8e-08 61.2 71 47.9
Nitab4.5_0000305g0110 Nicotiana tabacum HOM05D001384 ORTHO05D001215 5.8e-08 61.2 62 58.1
Potri.014G094800 Populus trichocarpa HOM05D001384 ORTHO05D001215 5.8e-08 61.2 77 51.9
Sed0001168 Sechium edule HOM05D001384 ORTHO05D001215 5.8e-08 61.2 77 53.2
Cpa.g.sc194.9 Carica papaya HOM05D001384 ORTHO05D001215 7.6e-08 60.8 38 76.3
Sp4g28370 Schrenkiella parvula HOM05D001384 ORTHO05D001215 7.6e-08 60.8 71 50.7
BcaB01g03224 Brassica carinata HOM05D001384 ORTHO05D001215 9.9e-08 60.5 75 49.3
BcaC02g12698 Brassica carinata HOM05D001384 ORTHO05D001215 9.9e-08 60.5 75 49.3
Thhalv10001752m.g Eutrema salsugineum HOM05D001384 ORTHO05D001215 9.9e-08 60.5 71 50.7
Gorai.008G123500 Gossypium raimondii HOM05D001384 ORTHO05D001215 9.9e-08 60.5 68 50.0
Haze_15620 Corylus avellana HOM05D001384 ORTHO05D001215 1.3e-07 60.1 52 69.2
CAN.G986.43 Capsicum annuum HOM05D001384 ORTHO05D001215 1.7e-07 59.7 61 52.5
Gohir.A10G068700 Gossypium hirsutum HOM05D001384 ORTHO05D001215 1.7e-07 59.7 71 49.3
Gohir.A11G094700 Gossypium hirsutum HOM05D001384 ORTHO05D001215 1.7e-07 59.7 71 53.5
Hma1.2p1_0384F.1_g141070 Hydrangea macrophylla HOM05D001384 ORTHO05D001215 1.7e-07 59.7 76 44.7
Manes.05G026100 Manihot esculenta HOM05D001384 ORTHO05D001215 1.7e-07 59.7 79 53.2
Actinidia02805 Actinidia chinensis HOM05D001384 ORTHO05D001215 2.2e-07 59.3 38 76.3
Actinidia28493 Actinidia chinensis HOM05D001384 ORTHO05D001215 2.2e-07 59.3 75 48.0
FAN01G1051 Fragaria x ananassa HOM05D001384 ORTHO05D001215 2.9e-07 58.9 70 55.7
FAN06G2635 Fragaria x ananassa HOM05D001384 ORTHO05D001215 2.9e-07 58.9 38 73.7
FAN06G3780 Fragaria x ananassa HOM05D001384 ORTHO05D001215 2.9e-07 58.9 38 73.7
FAN10G1694 Fragaria x ananassa HOM05D001384 ORTHO05D001215 2.9e-07 58.9 38 73.7
FAN10G3769 Fragaria x ananassa HOM05D001384 ORTHO05D001215 2.9e-07 58.9 38 73.7
ClCG05G001090 Citrullus lanatus HOM05D001384 ORTHO05D001215 3.8e-07 58.5 77 53.2
Dinv43894 Davidia involucrata HOM05D001384 ORTHO05D001215 3.8e-07 58.5 76 50.0
FAN03G0436 Fragaria x ananassa HOM05D001384 ORTHO05D001215 3.8e-07 58.5 38 73.7
Nitab4.5_0000522g0080 Nicotiana tabacum HOM05D001384 ORTHO05D001215 3.8e-07 58.5 73 49.3
Nitab4.5_0009232g0020 Nicotiana tabacum HOM05D001384 ORTHO05D001215 3.8e-07 58.5 62 56.5
Zm00001eb237880 Zea mays HOM05D001384 ORTHO05D001215 3.8e-07 58.5 74 58.1
BcaC02g12816 Brassica carinata HOM05D001384 ORTHO05D001215 4.9e-07 58.2 71 49.3
A05p01460 Brassica napus HOM05D001384 ORTHO05D001215 4.9e-07 58.2 71 49.3
C04p01650 Brassica napus HOM05D001384 ORTHO05D001215 4.9e-07 58.2 71 49.3
BolC4t21817H Brassica oleracea HOM05D001384 ORTHO05D001215 4.9e-07 58.2 71 49.3
BraA05t19143Z Brassica rapa HOM05D001384 ORTHO05D001215 4.9e-07 58.2 71 49.3
Peaxi162Scf01012g00121 Petunia axillaris HOM05D001384 ORTHO05D001215 4.9e-07 58.2 62 54.8
Prupe.2G183500 Prunus persica HOM05D001384 ORTHO05D001215 4.9e-07 58.2 46 63.0
RcHm_v2.0_Chr1g0358781 Rosa chinensis HOM05D001384 ORTHO05D001215 4.9e-07 58.2 37 75.7
THA.LOC104802055 Tarenaya hassleriana HOM05D001384 ORTHO05D001215 4.9e-07 58.2 60 55.0
Aa31LG10G15620 Aethionema arabicum HOM05D001384 ORTHO05D001215 6.4e-07 57.8 59 49.2
Ciclev10023364m.g Citrus clementina HOM05D001384 ORTHO05D001215 6.4e-07 57.8 67 58.2
MD07G1144900 Malus domestica HOM05D001384 ORTHO05D001215 6.4e-07 57.8 38 73.7
Sed0020989 Sechium edule HOM05D001384 ORTHO05D001215 6.4e-07 57.8 61 52.5
PGSC0003DMG400000207 Solanum tuberosum HOM05D001384 ORTHO05D001215 6.4e-07 57.8 71 52.1
GSVIVG01027049001 Vitis vinifera HOM05D001384 ORTHO05D001215 6.4e-07 57.8 38 71.1
CDE09G1367 Ceratophyllum demersum HOM05D001384 ORTHO05D001215 8.4e-07 57.4 88 44.3
MBI07_g20448_MAGBIO Magnolia biondii HOM05D001384 ORTHO05D001215 8.4e-07 57.4 70 45.7
Nitab4.5_0008261g0010 Nicotiana tabacum HOM05D001384 ORTHO05D001215 8.4e-07 57.4 58 51.7
Atru.chr5.621 Acer truncatum HOM05D001384 ORTHO05D001215 1.1e-06 57.0 79 45.6
BcaB01g03227 Brassica carinata HOM05D001384 ORTHO05D001215 1.1e-06 57.0 53 56.6
CDE02G0411 Ceratophyllum demersum HOM05D001384 ORTHO05D001215 1.1e-06 57.0 62 53.2
CDE08G0321 Ceratophyllum demersum HOM05D001384 ORTHO05D001215 1.1e-06 57.0 77 50.6
Os02g0264800 Oryza sativa ssp. japonica HOM05D001384 ORTHO05D001215 1.1e-06 57.0 38 73.7
TWI59G0487 Tripterygium wilfordii HOM05D001384 ORTHO05D001215 1.1e-06 57.0 71 54.9
MD01G1076000 Malus domestica HOM05D001384 ORTHO05D001215 1.4e-06 56.6 38 71.1
Peaxi162Scf00099g01816 Petunia axillaris HOM05D001384 ORTHO05D001215 1.4e-06 56.6 62 50.0
Gohir.A07G139600 Gossypium hirsutum HOM05D001384 ORTHO05D001215 1.9e-06 56.2 38 68.4
Gohir.D07G144700 Gossypium hirsutum HOM05D001384 ORTHO05D001215 1.9e-06 56.2 38 68.4
Gorai.001G156700 Gossypium raimondii HOM05D001384 ORTHO05D001215 1.9e-06 56.2 38 68.4
Os01g0657000 Oryza sativa ssp. japonica HOM05D001384 ORTHO05D001215 1.9e-06 56.2 69 43.5
vmacro22519 Vaccinium macrocarpon HOM05D001384 ORTHO05D001215 1.9e-06 56.2 66 50.0
A04p00990 Brassica napus HOM05D001384 ORTHO05D001215 2.4e-06 55.8 59 49.2
CSS0003232 Camellia sinensis var. sinensis HOM05D001384 ORTHO05D001215 2.4e-06 55.8 79 49.4
MELO3C006062.2 Cucumis melo HOM05D001384 ORTHO05D001215 2.4e-06 55.8 39 69.2
DCAR_006964 Daucus carota HOM05D001384 ORTHO05D001215 2.4e-06 55.8 50 60.0
Sabra02G0144100 Salix brachista HOM05D001384 ORTHO05D001215 2.4e-06 55.8 38 68.4
Actinidia27339 Actinidia chinensis HOM05D001384 ORTHO05D001215 3.2e-06 55.5 66 47.0
Carub.0005s2833 Capsella rubella HOM05D001384 ORTHO05D001215 3.2e-06 55.5 55 49.1
Solyc10g011730.3 Solanum lycopersicum HOM05D001384 ORTHO05D001215 3.2e-06 55.5 38 68.4
HanXRQChr04g0121001 Helianthus annuus HOM05D001384 ORTHO05D001215 4.2e-06 55.1 76 51.3
Solyc01g095515.1 Solanum lycopersicum HOM05D001384 ORTHO05D001215 4.2e-06 55.1 55 54.5
Sopen01g039270 Solanum pennellii HOM05D001384 ORTHO05D001215 4.2e-06 55.1 55 54.5
HPP92_026774 Vanilla planifolia HOM05D001384 ORTHO05D001215 4.2e-06 55.1 76 52.6
C04p31180 Brassica napus HOM05D001384 ORTHO05D001215 5.5e-06 54.7 58 50.0
BolC4t24669H Brassica oleracea HOM05D001384 ORTHO05D001215 5.5e-06 54.7 58 50.0
CiPaw.01G072100 Carya illinoinensis HOM05D001384 ORTHO05D001215 5.5e-06 54.7 49 59.2
Glyma.03G255700 Glycine max HOM05D001384 ORTHO05D001215 5.5e-06 54.7 77 44.2
Lalb_Chr04g0261751 Lupinus albus HOM05D001384 ORTHO05D001215 5.5e-06 54.7 37 70.3
Manes.01G249100 Manihot esculenta HOM05D001384 ORTHO05D001215 5.5e-06 54.7 48 70.8
PGR042G2194 Punica granatum HOM05D001384 ORTHO05D001215 5.5e-06 54.7 69 52.2
QL04p058637 Quercus lobata HOM05D001384 ORTHO05D001215 5.5e-06 54.7 37 70.3
QL04p059433 Quercus lobata HOM05D001384 ORTHO05D001215 5.5e-06 54.7 37 70.3
Sopen10g005520 Solanum pennellii HOM05D001384 ORTHO05D001215 5.5e-06 54.7 71 45.1
Zm00001eb203920 Zea mays HOM05D001384 ORTHO05D001215 5.5e-06 54.7 37 73.0
Zm00001eb359480 Zea mays HOM05D001384 ORTHO05D001215 5.5e-06 54.7 38 63.2
Aa31LG1G27700 Aethionema arabicum HOM05D001384 ORTHO05D001215 7.1e-06 54.3 60 46.7
Os05g0217000 Oryza sativa ssp. japonica HOM05D001384 ORTHO05D001215 7.1e-06 54.3 38 65.8
AL5G44040 Arabidopsis lyrata HOM05D001384 ORTHO05D001215 9.3e-06 53.9 56 53.6
BcaC02g10241 Brassica carinata HOM05D001384 ORTHO05D001215 9.3e-06 53.9 61 47.5
Gohir.A11G210500 Gossypium hirsutum HOM05D001384 ORTHO05D001215 9.3e-06 53.9 69 44.9
Os06g0505700 Oryza sativa ssp. japonica HOM05D001384 ORTHO05D001215 9.3e-06 53.9 38 68.4
Rhsim01G0169300 Rhododendron simsii HOM05D001384 ORTHO05D001215 9.3e-06 53.9 38 71.1
Rhsim07G0006800 Rhododendron simsii HOM05D001384 ORTHO05D001215 9.3e-06 53.9 66 50.0


User provided reference genes

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