Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_62.g23772 Utricularia gibba HOM05D004831 ORTHO05D003975 0.0e+00 1278.5 711 100.0
MSTRG.22702 Avicennia marina HOM05D004831 ORTHO05D003975 1.1e-96 358.6 725 38.6
Oeu021950.1 Olea europaea HOM05D004831 ORTHO05D003975 2.1e-79 301.2 808 31.9
SGA_v2.0_scaffold37G14809 Striga asiatica HOM05D004831 ORTHO05D003975 4.8e-76 290.0 787 32.3
Oeu024063.2 Olea europaea HOM05D004831 ORTHO05D003975 8.2e-76 289.3 692 35.0
Cc04_g03580 Coffea canephora HOM05D004831 ORTHO05D003975 7.0e-67 259.6 725 31.9
Migut.I00846 Erythranthe guttata HOM05D004831 ORTHO05D003975 7.0e-67 259.6 449 41.0
Solyc03g120340.3 Solanum lycopersicum HOM05D004831 ORTHO05D003975 2.9e-65 254.2 763 33.0
CAN.G438.52 Capsicum annuum HOM05D004831 ORTHO05D003975 3.8e-65 253.8 740 32.7
Sopen03g039230 Solanum pennellii HOM05D004831 ORTHO05D003975 8.0e-63 246.1 755 32.3
PGSC0003DMG400002560 Solanum tuberosum HOM05D004831 ORTHO05D003975 2.8e-60 237.7 770 31.6
Peaxi162Scf00015g00247 Petunia axillaris HOM05D004831 ORTHO05D003975 1.3e-57 228.8 795 29.9
ClCG09G002300 Citrullus lanatus HOM05D004831 ORTHO05D003975 5.7e-53 213.4 778 27.5
Dinv30528 Davidia involucrata HOM05D004831 ORTHO05D003975 1.2e-50 205.7 787 29.5
Eucgr.F03008 Eucalyptus grandis HOM05D004831 ORTHO05D003975 1.3e-49 202.2 750 29.6
CsaV3_7G033010 Cucumis sativus L. HOM05D004831 ORTHO05D003975 2.9e-49 201.1 756 29.2
Rhsim08G0218700 Rhododendron simsii HOM05D004831 ORTHO05D003975 1.9e-48 198.4 791 30.2
Nitab4.5_0003885g0040 Nicotiana tabacum HOM05D004831 ORTHO05D003975 4.2e-48 197.2 797 28.9
Sed0027172 Sechium edule HOM05D004831 ORTHO05D003975 2.1e-47 194.9 730 30.8
MELO3C023366.2 Cucumis melo HOM05D004831 ORTHO05D003975 2.8e-47 194.5 759 28.5
Nitab4.5_0003159g0050 Nicotiana tabacum HOM05D004831 ORTHO05D003975 4.7e-47 193.7 826 28.0
TWI12G0693 Tripterygium wilfordii HOM05D004831 ORTHO05D003975 1.8e-46 191.8 753 29.2
TWI18G0228 Tripterygium wilfordii HOM05D004831 ORTHO05D003975 1.8e-46 191.8 739 29.5
TAR383G0472 Trochodendron aralioides HOM05D004831 ORTHO05D003975 5.7e-45 186.8 756 27.6
Lj3g0022365 Lotus japonicus HOM05D004831 ORTHO05D003975 2.8e-44 184.5 763 28.6
QL05p025363 Quercus lobata HOM05D004831 ORTHO05D003975 1.1e-43 182.6 781 28.3
Ca_24215_v3 Cicer arietinum L. HOM05D004831 ORTHO05D003975 1.4e-43 182.2 774 28.8
Gorai.011G078100 Gossypium raimondii HOM05D004831 ORTHO05D003975 1.8e-43 181.8 762 27.8
vmacro18933 Vaccinium macrocarpon HOM05D004831 ORTHO05D003975 1.8e-43 181.8 732 28.4
CiPaw.02G152200 Carya illinoinensis HOM05D004831 ORTHO05D003975 9.2e-43 179.5 313 41.2
CANSAT56G2043 Cannabis sativa HOM05D004831 ORTHO05D003975 4.5e-42 177.2 796 26.5
Gohir.A10G079000 Gossypium hirsutum HOM05D004831 ORTHO05D003975 4.5e-42 177.2 761 28.1
Gohir.D10G072500 Gossypium hirsutum HOM05D004831 ORTHO05D003975 1.0e-41 176.0 755 27.2
Actinidia01793 Actinidia chinensis HOM05D004831 ORTHO05D003975 2.3e-41 174.9 845 26.2
TAR374G0326 Trochodendron aralioides HOM05D004831 ORTHO05D003975 2.3e-41 174.9 758 25.9
TAR626G1756 Trochodendron aralioides HOM05D004831 ORTHO05D003975 2.3e-41 174.9 758 25.9
Nn8g39278 Nelumbo nucifera HOM05D004831 ORTHO05D003975 2.9e-41 174.5 745 27.8
Prupe.3G073700 Prunus persica HOM05D004831 ORTHO05D003975 2.9e-41 174.5 790 28.5
GSVIVG01017152001 Vitis vinifera HOM05D004831 ORTHO05D003975 5.0e-41 173.7 911 26.1
Cfa002050 Carpinus fangiana HOM05D004831 ORTHO05D003975 1.9e-40 171.8 307 39.4
Dinv38059 Davidia involucrata HOM05D004831 ORTHO05D003975 8.0e-39 166.4 775 27.4
Lj5A62T33 Lonicera japonica HOM05D004831 ORTHO05D003975 2.3e-38 164.9 817 25.9
Aa31LG7G15290 Aethionema arabicum HOM05D004831 ORTHO05D003975 8.9e-38 162.9 754 26.7
Lsat_1_v5_gn_1_34820 Lactuca sativa HOM05D004831 ORTHO05D003975 1.5e-37 162.2 718 25.9
MBI01_g10032_MAGBIO Magnolia biondii HOM05D004831 ORTHO05D003975 4.4e-37 160.6 705 28.1
Medtr6g068960 Medicago truncatula HOM05D004831 ORTHO05D003975 4.4e-37 160.6 685 27.6
CSS0014524 Camellia sinensis var. sinensis HOM05D004831 ORTHO05D003975 5.7e-37 160.2 867 26.1
Aa31sc115G30 Aethionema arabicum HOM05D004831 ORTHO05D003975 9.8e-37 159.5 772 26.6
Medtr8g467560 Medicago truncatula HOM05D004831 ORTHO05D003975 6.4e-36 156.8 750 27.6
Actinidia15826 Actinidia chinensis HOM05D004831 ORTHO05D003975 8.3e-36 156.4 509 30.6
Manes.11G052100 Manihot esculenta HOM05D004831 ORTHO05D003975 8.3e-36 156.4 786 27.4
Atru.chr1.3226 Acer truncatum HOM05D004831 ORTHO05D003975 1.4e-35 155.6 856 25.2
arahy.Tifrunner.gnm1.ann1.5CE7DY Arachis hypogaea HOM05D004831 ORTHO05D003975 1.4e-35 155.6 749 25.8
Lalb_Chr24g0395761 Lupinus albus HOM05D004831 ORTHO05D003975 1.4e-35 155.6 760 26.4
Thecc.06G083000 Theobroma cacao HOM05D004831 ORTHO05D003975 1.4e-35 155.6 778 28.8
Potri.003G056600 Populus trichocarpa HOM05D004831 ORTHO05D003975 1.8e-35 155.2 801 26.7
Potri.001G178200 Populus trichocarpa HOM05D004831 ORTHO05D003975 1.2e-34 152.5 745 27.4
Hma1.2p1_2171F.1_g315970 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 2.7e-34 151.4 760 26.8
Sc15g0001240 Simmondsia chinensis HOM05D004831 ORTHO05D003975 4.6e-34 150.6 877 25.8
HanXRQChr05g0163461 Helianthus annuus HOM05D004831 ORTHO05D003975 5.9e-34 150.2 734 27.2
HanXRQChr02g0032681 Helianthus annuus HOM05D004831 ORTHO05D003975 1.3e-33 149.1 725 27.9
Glyma.13G360700 Glycine max HOM05D004831 ORTHO05D003975 5.0e-33 147.1 865 25.1
Glyma.15G013200 Glycine max HOM05D004831 ORTHO05D003975 5.0e-33 147.1 842 26.2
Sabra03G0032100 Salix brachista HOM05D004831 ORTHO05D003975 6.6e-33 146.7 797 27.0
CARHR016160 Cardamine hirsuta HOM05D004831 ORTHO05D003975 8.6e-33 146.4 734 26.3
Duzib235G0180 Durio zibethinus HOM05D004831 ORTHO05D003975 1.1e-32 146.0 714 26.6
Ciclev10024870m.g Citrus clementina HOM05D004831 ORTHO05D003975 4.3e-32 144.1 875 25.8
Hma1.2p1_0323F.1_g125270 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 3.6e-31 141.0 721 26.9
TPR.G31352 Trifolium pratense HOM05D004831 ORTHO05D003975 2.3e-30 138.3 890 24.4
EL10Ac9g21986 Beta vulgaris HOM05D004831 ORTHO05D003975 3.1e-30 137.9 745 26.3
Cpa.g.sc10.161 Carica papaya HOM05D004831 ORTHO05D003975 3.1e-30 137.9 835 25.0
PGR102G0340 Punica granatum HOM05D004831 ORTHO05D003975 5.2e-30 137.1 301 36.5
Phvul.002G299500 Phaseolus vulgaris HOM05D004831 ORTHO05D003975 1.2e-29 136.0 719 26.0
Gohir.A09G084100 Gossypium hirsutum HOM05D004831 ORTHO05D003975 5.8e-29 133.7 715 27.7
RcHm_v2.0_Chr2g0137511 Rosa chinensis HOM05D004831 ORTHO05D003975 7.5e-29 133.3 773 25.0
arahy.Tifrunner.gnm1.ann1.Y8U4CK Arachis hypogaea HOM05D004831 ORTHO05D003975 9.8e-29 132.9 719 25.3
Sed0009949 Sechium edule HOM05D004831 ORTHO05D003975 9.8e-29 132.9 564 27.8
COL.COLO4_30332 Corchorus olitorius HOM05D004831 ORTHO05D003975 1.7e-28 132.1 238 38.7
Lalb_Chr15g0078831 Lupinus albus HOM05D004831 ORTHO05D003975 2.9e-28 131.3 717 25.8
Gohir.D09G083900 Gossypium hirsutum HOM05D004831 ORTHO05D003975 3.7e-28 131.0 695 27.9
Hma1.2p1_0682F.1_g202670 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 3.7e-28 131.0 663 27.9
arahy.Tifrunner.gnm1.ann1.3B4S3M Arachis hypogaea HOM05D004831 ORTHO05D003975 8.3e-28 129.8 752 24.9
AUR62011616 Chenopodium quinoa HOM05D004831 ORTHO05D003975 1.1e-27 129.4 759 25.2
Gorai.006G099900 Gossypium raimondii HOM05D004831 ORTHO05D003975 1.1e-27 129.4 719 27.7
AUR62016432 Chenopodium quinoa HOM05D004831 ORTHO05D003975 9.2e-27 126.3 743 25.8
Migut.I00847 Erythranthe guttata HOM05D004831 ORTHO05D003975 2.0e-26 125.2 92 66.3
AT1G15660 Arabidopsis thaliana HOM05D004831 ORTHO05D003975 3.5e-26 124.4 750 26.1
Ah.01g021180 Amaranthus hybridus HOM05D004831 ORTHO05D003975 1.7e-25 122.1 760 25.9
DCAR_009558 Daucus carota HOM05D004831 ORTHO05D003975 3.0e-25 121.3 269 35.3
arahy.Tifrunner.gnm1.ann1.NQW8T9 Arachis hypogaea HOM05D004831 ORTHO05D003975 8.6e-25 119.8 306 32.4
Phvul.005G172500 Phaseolus vulgaris HOM05D004831 ORTHO05D003975 1.5e-24 119.0 295 32.9
MD17G1197700 Malus domestica HOM05D004831 ORTHO05D003975 2.5e-24 118.2 708 25.1
Hund06602 Selenicereus undatus HOM05D004831 ORTHO05D003975 2.5e-24 118.2 794 26.7
DCAR_026304 Daucus carota HOM05D004831 ORTHO05D003975 9.5e-24 116.3 672 24.4
PSO782G5420 Papaver somniferum HOM05D004831 ORTHO05D003975 1.6e-23 115.5 302 31.5
PSO063G2677 Papaver somniferum HOM05D004831 ORTHO05D003975 1.4e-22 112.5 315 30.8
THA.LOC104812471 Tarenaya hassleriana HOM05D004831 ORTHO05D003975 4.0e-22 110.9 825 25.0
BcaC05g25641 Brassica carinata HOM05D004831 ORTHO05D003975 6.8e-22 110.2 755 25.4
Thhalv10006918m.g Eutrema salsugineum HOM05D004831 ORTHO05D003975 1.2e-21 109.4 757 24.3
Sp1g13970 Schrenkiella parvula HOM05D004831 ORTHO05D003975 3.4e-21 107.8 762 23.2
Carub.0001s1544 Capsella rubella HOM05D004831 ORTHO05D003975 4.4e-21 107.5 750 24.3
BolC5t30118H Brassica oleracea HOM05D004831 ORTHO05D003975 7.5e-21 106.7 761 25.5
Duzib160G0042 Durio zibethinus HOM05D004831 ORTHO05D003975 7.5e-21 106.7 684 26.5
Lsat_1_v5_gn_9_45780 Lactuca sativa HOM05D004831 ORTHO05D003975 1.3e-20 105.9 237 32.5
BraA06t24347Z Brassica rapa HOM05D004831 ORTHO05D003975 4.9e-20 104.0 752 24.5
FvH4_6g30920 Fragaria vesca HOM05D004831 ORTHO05D003975 1.1e-19 102.8 730 25.5
A06p11680 Brassica napus HOM05D004831 ORTHO05D003975 1.9e-19 102.1 741 25.0
Psat4g139520 Pisum sativum HOM05D004831 ORTHO05D003975 4.6e-18 97.4 291 30.9
BcaC05g25510 Brassica carinata HOM05D004831 ORTHO05D003975 6.0e-18 97.1 751 23.2
ATR0037G028 Amborella trichopoda HOM05D004831 ORTHO05D003975 1.0e-17 96.3 740 23.4
FAN14G0810 Fragaria x ananassa HOM05D004831 ORTHO05D003975 1.0e-17 96.3 750 24.7
ECA247G1173 Erigeron canadensis HOM05D004831 ORTHO05D003975 1.7e-17 95.5 698 23.8
C05p13810 Brassica napus HOM05D004831 ORTHO05D012057 1.5e-16 92.4 705 25.1
FAN09G2060 Fragaria x ananassa HOM05D004831 ORTHO05D003975 1.5e-16 92.4 751 24.6
AL1G27760 Arabidopsis lyrata HOM05D004831 ORTHO05D003975 5.6e-16 90.5 741 23.3
ClCG05G013830 Citrullus lanatus HOM05D004831 ORTHO05D003975 7.3e-16 90.1 155 37.4
Manes.04G121450 Manihot esculenta HOM05D004831 ORTHO05D003975 2.8e-15 88.2 293 31.1
CDE04G1285 Ceratophyllum demersum HOM05D004831 ORTHO05D003975 4.0e-14 84.3 807 22.3
Actinidia15827 Actinidia chinensis HOM05D004831 ORTHO05D003975 4.4e-13 80.9 173 38.7
Aa31LG7G300 Aethionema arabicum HOM05D004831 ORTHO05D003975 9.9e-13 79.7 539 22.6
SHI09311 Sapria himalayana HOM05D004831 ORTHO05D003975 1.1e-11 76.3 130 40.8
COL.COLO4_30333 Corchorus olitorius HOM05D004831 ORTHO05D003975 5.4e-11 73.9 77 48.1
TAR624G1194 Trochodendron aralioides HOM05D004831 ORTHO05D003975 5.4e-11 73.9 77 48.1
Zm00001eb358290 Zea mays HOM05D018572 ORTHO05D003975 7.1e-11 73.6 104 42.3
AagrBONN_evm.TU.Sc2ySwM_368.483__484 Anthoceros agrestis HOM05D004831 ORTHO05D003975 9.2e-11 73.2 105 43.8
Os01g0617700 Oryza sativa ssp. japonica HOM05D004831 ORTHO05D003975 1.2e-10 72.8 75 44.0
Aqoxy7G01849 Aquilegia oxysepala HOM05D004831 ORTHO05D003975 1.6e-10 72.4 729 23.0
FAN02G3038 Fragaria x ananassa HOM05D004831 ORTHO05D003975 2.1e-10 72.0 608 24.3
TPR.G24077 Trifolium pratense HOM05D004831 ORTHO05D003975 6.0e-10 70.5 127 36.2
Haze_16453 Corylus avellana HOM05D004831 ORTHO05D003975 1.0e-09 69.7 562 24.6
Mapoly0008s0161 Marchantia polymorpha HOM05D004831 ORTHO05D003975 1.1e-08 66.2 122 36.1
Haze_16456 Corylus avellana HOM05D004831 ORTHO05D003975 1.9e-08 65.5 112 39.3
MD09G1215000 Malus domestica HOM05D004831 ORTHO05D003975 4.3e-08 64.3 148 33.1
BcaB03g14531 Brassica carinata HOM05D004831 ORTHO05D017393 2.1e-07 62.0 173 28.9
Pp3c2_32580 Physcomitrium patens HOM05D004831 ORTHO05D003975 3.6e-07 61.2 49 57.1
HPP92_017895 Vanilla planifolia HOM05D004831 ORTHO05D003975 4.7e-07 60.8 794 22.5
Duzib192G1036 Durio zibethinus HOM05D004831 ORTHO05D003975 8.1e-07 60.1 208 31.7
Zm00001eb159780 Zea mays HOM05D018572 ORTHO05D003975 8.1e-07 60.1 264 26.1
SMO203G0255 Selaginella moellendorffii HOM05D004831 ORTHO05D003975 2.4e-06 58.5 80 40.0
SEGI_34595 Sequoiadendron giganteum HOM05D004831 ORTHO05D003975 4.0e-06 57.8 39 64.1


User provided reference genes

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