Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_62.g23699 Utricularia gibba HOM05D004844 ORTHO05D006036 5.0e-245 850.9 499 100.0
MSTRG.13461 Avicennia marina HOM05D004844 ORTHO05D006036 5.7e-124 448.7 600 50.5
SalBow4G3252 Salvia bowleyana HOM05D004844 ORTHO05D006036 6.5e-120 435.3 597 48.7
Migut.E00244 Erythranthe guttata HOM05D004844 ORTHO05D006036 4.2e-119 432.6 607 47.6
SGA_v2.0_scaffold287G47183 Striga asiatica HOM05D004844 ORTHO05D006036 3.6e-118 429.5 636 46.1
Oeu019000.3 Olea europaea HOM05D004844 ORTHO05D006036 9.1e-114 414.8 565 50.6
CAN.G1021.26 Capsicum annuum HOM05D004844 ORTHO05D006036 7.2e-111 405.2 604 45.2
Solyc05g011990.4 Solanum lycopersicum HOM05D004844 ORTHO05D006036 1.5e-108 397.5 611 44.4
Sopen05g006740 Solanum pennellii HOM05D004844 ORTHO05D006036 1.4e-106 391.0 611 44.0
Cc11_g11690 Coffea canephora HOM05D004844 ORTHO05D006036 2.4e-106 390.2 604 44.9
Nitab4.5_0011617g0010 Nicotiana tabacum HOM05D004844 ORTHO05D006036 2.4e-106 390.2 617 44.9
Actinidia19906 Actinidia chinensis HOM05D004844 ORTHO05D006036 4.1e-106 389.4 606 43.6
PGSC0003DMG400028356 Solanum tuberosum HOM05D004844 ORTHO05D006036 2.6e-105 386.7 611 43.9
GSVIVG01012255001 Vitis vinifera HOM05D004844 ORTHO05D006036 1.7e-104 384.0 600 42.8
Nitab4.5_0000027g0110 Nicotiana tabacum HOM05D004844 ORTHO05D006036 3.8e-104 382.9 601 43.9
DCAR_022184 Daucus carota HOM05D004844 ORTHO05D006036 1.2e-102 377.9 588 43.2
HanXRQChr06g0168931 Helianthus annuus HOM05D004844 ORTHO05D006036 1.2e-102 377.9 594 45.8
Rhsim12G0073500 Rhododendron simsii HOM05D004844 ORTHO05D006036 2.3e-101 373.6 601 43.9
ECA233G1780 Erigeron canadensis HOM05D004844 ORTHO05D006036 5.7e-100 369.0 583 45.3
CSS0013036 Camellia sinensis var. sinensis HOM05D004844 ORTHO05D006036 9.1e-98 361.7 583 44.9
Lsat_1_v5_gn_8_35620 Lactuca sativa HOM05D004844 ORTHO05D006036 5.9e-97 359.0 592 43.8
Phvul.007G274500 Phaseolus vulgaris HOM05D004844 ORTHO05D006036 7.7e-97 358.6 625 41.4
Cpa.g.sc1.164 Carica papaya HOM05D004844 ORTHO05D006036 1.0e-96 358.2 603 43.0
TWI79G0207 Tripterygium wilfordii HOM05D004844 ORTHO05D006036 1.7e-96 357.5 610 44.3
Thhalv10018096m.g Eutrema salsugineum HOM05D004844 ORTHO05D006036 5.0e-96 355.9 609 43.3
Prupe.1G290900 Prunus persica HOM05D004844 ORTHO05D006036 5.0e-96 355.9 620 42.1
TAR627G0787 Trochodendron aralioides HOM05D004844 ORTHO05D006036 6.5e-96 355.5 604 44.4
Glyma.02G003100 Glycine max HOM05D004844 ORTHO05D006036 4.2e-95 352.8 600 40.3
Dinv20143 Davidia involucrata HOM05D004844 ORTHO05D006036 5.5e-95 352.4 534 45.7
Gorai.012G185400 Gossypium raimondii HOM05D004844 ORTHO05D006036 7.2e-95 352.1 612 43.1
Potri.010G140100 Populus trichocarpa HOM05D004844 ORTHO05D006036 7.2e-95 352.1 607 41.7
Thecc.02G325500 Theobroma cacao HOM05D004844 ORTHO05D006036 7.2e-95 352.1 615 44.2
MBI19_g00156_MAGBIO Magnolia biondii HOM05D004844 ORTHO05D006036 9.4e-95 351.7 630 40.5
Gohir.D04G190100 Gossypium hirsutum HOM05D004844 ORTHO05D006036 1.2e-94 351.3 612 42.5
Gohir.A04G145600 Gossypium hirsutum HOM05D004844 ORTHO05D006036 2.7e-94 350.1 612 42.6
Manes.17G024283 Manihot esculenta HOM05D004844 ORTHO05D006036 3.6e-94 349.7 611 43.9
Nn4g23518 Nelumbo nucifera HOM05D004844 ORTHO05D006036 6.1e-94 349.0 613 42.6
Aa31LG7G8740 Aethionema arabicum HOM05D004844 ORTHO05D006036 1.8e-93 347.4 598 42.3
Sabra10G0108200 Salix brachista HOM05D004844 ORTHO05D006036 1.8e-93 347.4 622 41.5
AUR62003071 Chenopodium quinoa HOM05D004844 ORTHO05D006036 2.3e-93 347.1 597 40.4
COL.COLO4_27840 Corchorus olitorius HOM05D004844 ORTHO05D006036 3.0e-93 346.7 625 42.9
Medtr1g064300 Medicago truncatula HOM05D004844 ORTHO05D006036 3.0e-93 346.7 605 40.8
Peaxi162Scf00175g00927 Petunia axillaris HOM05D004844 ORTHO05D006036 4.0e-93 346.3 497 43.3
FvH4_4g29570 Fragaria vesca HOM05D004844 ORTHO05D006036 5.2e-93 345.9 598 42.5
THA.LOC104821991 Tarenaya hassleriana HOM05D004844 ORTHO05D006036 5.2e-93 345.9 619 43.0
Cfa008853 Carpinus fangiana HOM05D004844 ORTHO05D006036 8.8e-93 345.1 625 39.4
Glyma.10G005700 Glycine max HOM05D004844 ORTHO05D006036 1.5e-92 344.4 446 46.0
Lalb_Chr25g0284481 Lupinus albus HOM05D004844 ORTHO05D006036 2.0e-92 344.0 447 46.5
Sc04g0007400 Simmondsia chinensis HOM05D004844 ORTHO05D006036 2.6e-92 343.6 619 39.9
Psat1g047040 Pisum sativum HOM05D004844 ORTHO05D006036 4.4e-92 342.8 601 40.8
RcHm_v2.0_Chr4g0437801 Rosa chinensis HOM05D004844 ORTHO05D006036 7.5e-92 342.0 618 42.6
FAN12G1456 Fragaria x ananassa HOM05D004844 ORTHO05D006036 1.3e-91 341.3 619 41.4
VMungo0720G2226 Vigna mungo HOM05D004844 ORTHO05D006036 1.7e-91 340.9 446 45.3
CANSAT64G2735 Cannabis sativa HOM05D004844 ORTHO05D006036 2.8e-91 340.1 625 40.8
FAN17G0509 Fragaria x ananassa HOM05D004844 ORTHO05D006036 1.1e-90 338.2 617 41.3
AUR62007885 Chenopodium quinoa HOM05D004844 ORTHO05D006036 1.8e-90 337.4 578 40.7
Ciclev10030646m.g Citrus clementina HOM05D004844 ORTHO05D006036 1.8e-90 337.4 443 46.5
Sp5g24170 Schrenkiella parvula HOM05D004844 ORTHO05D006036 1.8e-90 337.4 614 39.4
PGR102G1068 Punica granatum HOM05D004844 ORTHO05D006036 3.1e-90 336.7 603 42.8
MD16G1058200 Malus domestica HOM05D004844 ORTHO05D006036 5.4e-90 335.9 621 38.8
Medtr1g442830 Medicago truncatula HOM05D004844 ORTHO05D006036 9.1e-90 335.1 628 41.4
arahy.Tifrunner.gnm1.ann1.Q1MRHA Arachis hypogaea HOM05D004844 ORTHO05D006036 5.9e-89 332.4 587 40.5
FAN22G0359 Fragaria x ananassa HOM05D004844 ORTHO05D006036 1.3e-88 331.3 621 39.0
C02p25790 Brassica napus HOM05D004844 ORTHO05D006036 2.3e-88 330.5 613 41.9
BolC2t08648H Brassica oleracea HOM05D004844 ORTHO05D006036 8.6e-88 328.6 610 42.3
Ah.03g138670 Amaranthus hybridus HOM05D004844 ORTHO05D006036 2.5e-87 327.0 607 41.8
A02p15610 Brassica napus HOM05D004844 ORTHO05D006036 2.5e-87 327.0 622 40.2
Ca_12009_v3 Cicer arietinum L. HOM05D004844 ORTHO05D006036 3.3e-87 326.6 594 38.7
Nitab4.5_0000027g0130 Nicotiana tabacum HOM05D004844 ORTHO05D006036 4.3e-87 326.2 556 42.6
ATR0827G008 Amborella trichopoda HOM05D004844 ORTHO05D006036 5.6e-87 325.9 597 39.9
Eucgr.B03138 Eucalyptus grandis HOM05D004844 ORTHO05D006036 5.6e-87 325.9 602 39.5
BraA02t06622Z Brassica rapa HOM05D004844 ORTHO05D006036 7.2e-87 325.5 622 41.5
Carub.0002s1569 Capsella rubella HOM05D004844 ORTHO05D006036 7.2e-87 325.5 615 41.6
arahy.Tifrunner.gnm1.ann1.H7MRPA Arachis hypogaea HOM05D004844 ORTHO05D006036 9.5e-87 325.1 623 38.2
CsaV3_6G033830 Cucumis sativus L. HOM05D004844 ORTHO05D006036 1.6e-86 324.3 595 39.8
ClCG08G010550 Citrullus lanatus HOM05D004844 ORTHO05D006036 2.8e-86 323.6 603 41.1
arahy.Tifrunner.gnm1.ann1.79UB1D Arachis hypogaea HOM05D004844 ORTHO05D006036 8.0e-86 322.0 624 37.3
FAN07G0902 Fragaria x ananassa HOM05D004844 ORTHO05D006036 1.0e-85 321.6 620 39.5
CARHR061950 Cardamine hirsuta HOM05D004844 ORTHO05D006036 1.4e-85 321.2 622 39.4
PSO063G4789 Papaver somniferum HOM05D004844 ORTHO05D006036 2.3e-85 320.5 583 41.2
EL10Ac6g14694 Beta vulgaris HOM05D004844 ORTHO05D006036 4.0e-85 319.7 622 38.7
AL2G28120 Arabidopsis lyrata HOM05D004844 ORTHO05D006036 6.8e-85 318.9 612 41.0
MELO3C011408.2 Cucumis melo HOM05D004844 ORTHO05D006036 6.8e-85 318.9 622 38.3
AT1G69070 Arabidopsis thaliana HOM05D004844 ORTHO05D006036 8.9e-85 318.5 618 39.3
TPR.G25170 Trifolium pratense HOM05D004844 ORTHO05D006036 3.4e-84 316.6 443 43.3
Lj6g0000403 Lotus japonicus HOM05D004844 ORTHO05D006036 9.8e-84 315.1 579 41.6
CDE10G1236 Ceratophyllum demersum HOM05D004844 ORTHO05D006036 1.3e-83 314.7 605 37.7
PSO782G4088 Papaver somniferum HOM05D004844 ORTHO05D006036 2.9e-83 313.5 594 39.6
Aqoxy3G03719 Aquilegia oxysepala HOM05D004844 ORTHO05D006036 6.4e-83 312.4 610 37.7
Atru.BG.298.p Acer truncatum HOM05D004844 ORTHO05D006036 3.0e-80 303.5 554 40.3
Sed0010809 Sechium edule HOM05D004844 ORTHO05D006036 4.3e-79 299.7 595 41.0
Os03g0598200 Oryza sativa ssp. japonica HOM05D004844 ORTHO05D006036 2.1e-78 297.4 582 37.8
Duzib251G0783 Durio zibethinus HOM05D004844 ORTHO05D006036 8.0e-78 295.4 590 40.3
Glyma.18G236233 Glycine max HOM05D004844 ORTHO05D006036 3.4e-76 290.0 390 45.9
BcaC03g15030 Brassica carinata HOM05D004844 ORTHO05D006036 1.4e-74 284.6 445 41.3
Zm00001eb049910 Zea mays HOM05D004844 ORTHO05D006036 1.6e-70 271.2 593 36.1
Lj6A775T24 Lonicera japonica HOM05D004844 ORTHO05D006036 9.8e-68 261.9 608 36.0
TAR623G1540 Trochodendron aralioides HOM05D004844 ORTHO05D006036 1.2e-65 255.0 265 54.7
AagrBONN_evm.TU.Sc2ySwM_228.4292 Anthoceros agrestis HOM05D004844 ORTHO05D006036 1.7e-64 251.1 452 35.8
CiPaw.06G094100 Carya illinoinensis HOM05D004844 ORTHO05D006036 3.9e-64 250.0 527 37.2
Mapoly0013s0047 Marchantia polymorpha HOM05D004844 ORTHO05D006036 2.1e-62 244.2 448 36.8
Pp3c13_7740 Physcomitrium patens HOM05D004844 ORTHO05D006036 5.2e-61 239.6 447 35.8
CBR_g4135 Chara braunii HOM05D004844 ORTHO05D006036 3.9e-56 223.4 464 35.3
MD13G1058900 Malus domestica HOM05D004844 ORTHO05D006036 3.6e-54 216.9 471 35.5
SEGI_13774 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 2.4e-53 214.2 264 43.9
HPP92_012262 Vanilla planifolia HOM05D004844 ORTHO05D008684 4.4e-52 209.9 265 46.4
Medtr1g442820 Medicago truncatula HOM05D004844 ORTHO05D006036 4.8e-38 163.3 463 33.9
Oeu063767.1 Olea europaea HOM05D004844 ORTHO05D006036 3.5e-33 147.1 262 50.8
TAR623G0992 Trochodendron aralioides HOM05D004844 ORTHO05D006036 8.4e-27 125.9 254 45.7
TAR627G1107 Trochodendron aralioides HOM05D004844 ORTHO05D006036 4.2e-26 123.6 241 50.2
PRCOL_00006390 Prasinoderma coloniale HOM05D004844 ORTHO05D006036 8.7e-24 115.9 472 25.4
SEGI_27898 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 8.7e-24 115.9 251 40.2
SEGI_03778 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 1.9e-23 114.8 251 39.0
AagrBONN_evm.TU.Sc2ySwM_362.1117 Anthoceros agrestis HOM05D004844 ORTHO05D006036 1.1e-18 99.0 118 43.2
EL10Ac3g06594 Beta vulgaris HOM05D004844 ORTHO05D006036 9.3e-18 95.9 73 65.8
BolC2t08646H Brassica oleracea HOM05D004844 ORTHO05D006036 2.7e-17 94.4 91 60.4
C02p25770 Brassica napus HOM05D004844 ORTHO05D006036 1.3e-16 92.0 91 60.4
CAN.G1021.25 Capsicum annuum HOM05D004844 ORTHO05D006036 3.3e-15 87.4 203 31.5
EL10Ac6g14485 Beta vulgaris HOM05D004844 ORTHO05D006036 5.7e-15 86.7 88 55.7
EL10Ac5g11674 Beta vulgaris HOM05D004844 ORTHO05D010835 2.8e-14 84.3 85 57.6
SEGI_15727 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 2.4e-13 81.3 116 48.3
Cre06.g260850 Chlamydomonas reinhardtii HOM05D004844 ORTHO05D006036 1.2e-12 79.0 93 35.5
Rhsim10G0117800 Rhododendron simsii HOM05D004844 ORTHO05D006036 2.6e-12 77.8 81 48.1
MD13G1058800 Malus domestica HOM05D004844 ORTHO05D006036 1.7e-11 75.1 72 63.9
Cfa022757 Carpinus fangiana HOM05D004844 ORTHO05D126324 1.4e-10 72.0 375 24.8
RcHm_v2.0_Chr1g0340811 Rosa chinensis HOM05D004844 ORTHO05D006036 1.2e-09 68.9 57 64.9


User provided reference genes

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