Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_62.g23698 Utricularia gibba HOM05D004844 ORTHO05D006036 3.9e-103 378.3 206 100.0
Migut.E00244 Erythranthe guttata HOM05D004844 ORTHO05D006036 7.0e-44 181.4 250 48.8
SGA_v2.0_scaffold287G47183 Striga asiatica HOM05D004844 ORTHO05D006036 1.1e-41 174.1 260 47.7
SalBow4G3252 Salvia bowleyana HOM05D004844 ORTHO05D006036 6.1e-40 168.3 261 46.0
MSTRG.13461 Avicennia marina HOM05D004844 ORTHO05D006036 1.5e-38 163.7 257 45.5
Lj6A775T24 Lonicera japonica HOM05D004844 ORTHO05D006036 1.0e-31 141.0 265 42.3
TAR627G0787 Trochodendron aralioides HOM05D004844 ORTHO05D006036 2.6e-30 136.3 250 42.8
TAR627G1107 Trochodendron aralioides HOM05D004844 ORTHO05D006036 3.4e-30 136.0 250 42.8
GSVIVG01012255001 Vitis vinifera HOM05D004844 ORTHO05D006036 1.1e-28 131.0 224 41.5
Cc11_g11690 Coffea canephora HOM05D004844 ORTHO05D006036 1.8e-28 130.2 221 42.5
CiPaw.06G094100 Carya illinoinensis HOM05D004844 ORTHO05D006036 1.6e-27 127.1 257 41.2
Thecc.02G325500 Theobroma cacao HOM05D004844 ORTHO05D006036 2.0e-27 126.7 254 39.4
Duzib251G0783 Durio zibethinus HOM05D004844 ORTHO05D006036 2.7e-27 126.3 218 42.7
ECA233G1780 Erigeron canadensis HOM05D004844 ORTHO05D006036 4.5e-27 125.6 223 40.8
Manes.17G024283 Manihot esculenta HOM05D004844 ORTHO05D006036 4.5e-27 125.6 255 38.8
Sc04g0007400 Simmondsia chinensis HOM05D004844 ORTHO05D006036 4.5e-27 125.6 239 41.8
Peaxi162Scf00175g00927 Petunia axillaris HOM05D004844 ORTHO05D006036 7.8e-27 124.8 218 43.1
Sopen05g006740 Solanum pennellii HOM05D004844 ORTHO05D006036 2.3e-26 123.2 219 45.2
CANSAT64G2735 Cannabis sativa HOM05D004844 ORTHO05D006036 2.9e-26 122.9 249 41.4
DCAR_022184 Daucus carota HOM05D004844 ORTHO05D006036 3.8e-26 122.5 228 39.0
PGSC0003DMG400028356 Solanum tuberosum HOM05D004844 ORTHO05D006036 3.8e-26 122.5 226 44.2
Lj6g0000403 Lotus japonicus HOM05D004844 ORTHO05D006036 5.0e-26 122.1 253 42.7
Solyc05g011990.4 Solanum lycopersicum HOM05D004844 ORTHO05D006036 5.0e-26 122.1 221 43.4
CSS0013036 Camellia sinensis var. sinensis HOM05D004844 ORTHO05D006036 6.6e-26 121.7 263 39.2
Cfa008853 Carpinus fangiana HOM05D004844 ORTHO05D006036 8.6e-26 121.3 250 39.6
AUR62007885 Chenopodium quinoa HOM05D004844 ORTHO05D006036 8.6e-26 121.3 251 41.0
Nn4g23518 Nelumbo nucifera HOM05D004844 ORTHO05D006036 8.6e-26 121.3 257 40.9
Gohir.A04G145600 Gossypium hirsutum HOM05D004844 ORTHO05D006036 1.1e-25 120.9 251 38.6
AUR62003071 Chenopodium quinoa HOM05D004844 ORTHO05D006036 1.9e-25 120.2 243 39.1
Gohir.D04G190100 Gossypium hirsutum HOM05D004844 ORTHO05D006036 2.5e-25 119.8 251 39.0
Gorai.012G185400 Gossypium raimondii HOM05D004844 ORTHO05D006036 3.3e-25 119.4 251 39.0
Nitab4.5_0000027g0110 Nicotiana tabacum HOM05D004844 ORTHO05D006036 3.3e-25 119.4 221 43.4
Rhsim12G0073500 Rhododendron simsii HOM05D004844 ORTHO05D006036 3.3e-25 119.4 220 39.5
Sed0010809 Sechium edule HOM05D004844 ORTHO05D006036 3.3e-25 119.4 252 40.1
Lsat_1_v5_gn_8_35620 Lactuca sativa HOM05D004844 ORTHO05D006036 4.3e-25 119.0 266 37.6
Nitab4.5_0011617g0010 Nicotiana tabacum HOM05D004844 ORTHO05D006036 4.3e-25 119.0 221 42.5
CsaV3_6G033830 Cucumis sativus L. HOM05D004844 ORTHO05D006036 5.6e-25 118.6 217 41.0
Aqoxy3G03719 Aquilegia oxysepala HOM05D004844 ORTHO05D006036 1.2e-24 117.5 216 42.1
Haze_11873 Corylus avellana HOM05D004844 ORTHO05D006036 4.7e-24 115.5 279 36.9
Glyma.10G005700 Glycine max HOM05D004844 ORTHO05D006036 6.1e-24 115.2 240 41.7
Ciclev10030646m.g Citrus clementina HOM05D004844 ORTHO05D006036 1.0e-23 114.4 242 38.4
VMungo0720G2226 Vigna mungo HOM05D004844 ORTHO05D006036 1.4e-23 114.0 212 42.5
MD16G1058200 Malus domestica HOM05D004844 ORTHO05D006036 3.0e-23 112.8 214 38.8
Phvul.007G274500 Phaseolus vulgaris HOM05D004844 ORTHO05D006036 3.0e-23 112.8 212 42.0
Ah.03g138670 Amaranthus hybridus HOM05D004844 ORTHO05D006036 6.8e-23 111.7 254 39.0
MELO3C011408.2 Cucumis melo HOM05D004844 ORTHO05D006036 8.9e-23 111.3 217 40.6
PGR102G1068 Punica granatum HOM05D004844 ORTHO05D006036 8.9e-23 111.3 254 40.2
Eucgr.B03138 Eucalyptus grandis HOM05D004844 ORTHO05D006036 1.5e-22 110.5 253 38.7
Glyma.02G003100 Glycine max HOM05D004844 ORTHO05D006036 2.0e-22 110.2 249 39.4
TAR623G0736 Trochodendron aralioides HOM05D004844 ORTHO05D006036 2.6e-22 109.8 247 37.7
Dinv20143 Davidia involucrata HOM05D004844 ORTHO05D006036 3.4e-22 109.4 223 39.5
ClCG08G010550 Citrullus lanatus HOM05D004844 ORTHO05D006036 9.8e-22 107.8 231 39.0
Zm00001eb049910 Zea mays HOM05D004844 ORTHO05D006036 9.8e-22 107.8 252 36.9
HanXRQChr06g0168931 Helianthus annuus HOM05D004844 ORTHO05D006036 1.3e-21 107.5 239 40.2
COL.COLO4_27840 Corchorus olitorius HOM05D004844 ORTHO05D006036 2.9e-21 106.3 266 36.1
TWI79G0207 Tripterygium wilfordii HOM05D004844 ORTHO05D006036 2.9e-21 106.3 257 37.7
Medtr1g442830 Medicago truncatula HOM05D004844 ORTHO05D006036 3.7e-21 105.9 252 35.7
Potri.010G140100 Populus trichocarpa HOM05D004844 ORTHO05D006036 4.9e-21 105.5 232 37.9
Atru.BG.298.p Acer truncatum HOM05D004844 ORTHO05D006036 8.3e-21 104.8 216 37.5
EL10Ac6g14694 Beta vulgaris HOM05D004844 ORTHO05D006036 8.3e-21 104.8 228 41.7
CAN.G1021.26 Capsicum annuum HOM05D004844 ORTHO05D006036 1.1e-20 104.4 251 38.2
Psat1g047040 Pisum sativum HOM05D004844 ORTHO05D006036 1.4e-20 104.0 224 39.3
Cpa.g.sc1.164 Carica papaya HOM05D004844 ORTHO05D006036 4.1e-20 102.4 247 36.4
MD13G1058900 Malus domestica HOM05D004844 ORTHO05D006036 4.1e-20 102.4 247 36.8
Ca_12009_v3 Cicer arietinum L. HOM05D004844 ORTHO05D006036 5.4e-20 102.1 222 39.2
PSO063G4789 Papaver somniferum HOM05D004844 ORTHO05D006036 5.4e-20 102.1 245 35.5
Sabra10G0108200 Salix brachista HOM05D004844 ORTHO05D006036 7.0e-20 101.7 236 36.9
Os03g0598200 Oryza sativa ssp. japonica HOM05D004844 ORTHO05D006036 9.2e-20 101.3 211 37.4
CDE10G1236 Ceratophyllum demersum HOM05D004844 ORTHO05D006036 1.2e-19 100.9 238 36.1
PSO782G4088 Papaver somniferum HOM05D004844 ORTHO05D006036 2.0e-19 100.1 245 34.7
Medtr1g064300 Medicago truncatula HOM05D004844 ORTHO05D006036 3.5e-19 99.4 218 37.2
TPR.G25179 Trifolium pratense HOM05D004844 ORTHO05D006036 1.3e-18 97.4 225 38.2
Actinidia19906 Actinidia chinensis HOM05D004844 ORTHO05D006036 3.0e-18 96.3 139 45.3
Prupe.1G290900 Prunus persica HOM05D004844 ORTHO05D006036 8.6e-18 94.7 214 36.0
Lalb_Chr25g0284481 Lupinus albus HOM05D004844 ORTHO05D006036 1.9e-17 93.6 213 35.7
CARHR061950 Cardamine hirsuta HOM05D004844 ORTHO05D006036 2.5e-17 93.2 241 32.4
MBI19_g00156_MAGBIO Magnolia biondii HOM05D004844 ORTHO05D006036 7.3e-17 91.7 353 30.0
Thhalv10018096m.g Eutrema salsugineum HOM05D004844 ORTHO05D006036 1.2e-16 90.9 253 34.8
Aa31LG7G8740 Aethionema arabicum HOM05D004844 ORTHO05D006036 1.6e-16 90.5 251 33.1
ATR0827G008 Amborella trichopoda HOM05D004844 ORTHO05D006036 8.0e-16 88.2 172 41.3
arahy.Tifrunner.gnm1.ann1.Q1MRHA Arachis hypogaea HOM05D004844 ORTHO05D006036 1.4e-15 87.4 250 34.8
arahy.Tifrunner.gnm1.ann1.79UB1D Arachis hypogaea HOM05D004844 ORTHO05D006036 3.1e-15 86.3 250 34.8
Mapoly0013s0047 Marchantia polymorpha HOM05D004844 ORTHO05D006036 4.0e-15 85.9 254 35.8
A02p15610 Brassica napus HOM05D004844 ORTHO05D006036 5.2e-15 85.5 252 36.9
arahy.Tifrunner.gnm1.ann1.H7MRPA Arachis hypogaea HOM05D004844 ORTHO05D006036 6.8e-15 85.1 250 34.0
Sp5g24170 Schrenkiella parvula HOM05D004844 ORTHO05D006036 8.9e-15 84.7 246 33.3
C02p25790 Brassica napus HOM05D004844 ORTHO05D006036 1.5e-14 84.0 252 36.9
BraA02t06622Z Brassica rapa HOM05D004844 ORTHO05D006036 1.5e-14 84.0 241 35.7
FAN22G0359 Fragaria x ananassa HOM05D004844 ORTHO05D006036 2.0e-14 83.6 208 35.6
Glyma.18G236167 Glycine max HOM05D004844 ORTHO05D006036 4.4e-14 82.4 53 77.4
AL2G28120 Arabidopsis lyrata HOM05D004844 ORTHO05D006036 7.5e-14 81.6 214 34.1
Carub.0002s1569 Capsella rubella HOM05D004844 ORTHO05D006036 1.3e-13 80.9 253 31.6
THA.LOC104821991 Tarenaya hassleriana HOM05D004844 ORTHO05D006036 1.3e-13 80.9 257 35.0
AagrBONN_evm.TU.Sc2ySwM_228.4292 Anthoceros agrestis HOM05D004844 ORTHO05D006036 1.7e-13 80.5 247 32.0
FAN17G0509 Fragaria x ananassa HOM05D004844 ORTHO05D006036 4.9e-13 79.0 244 33.6
FAN12G1456 Fragaria x ananassa HOM05D004844 ORTHO05D006036 6.4e-13 78.6 206 34.5
AT1G69070 Arabidopsis thaliana HOM05D004844 ORTHO05D006036 1.1e-12 77.8 243 32.9
RcHm_v2.0_Chr4g0437801 Rosa chinensis HOM05D004844 ORTHO05D006036 1.1e-12 77.8 206 34.0
BolC2t08648H Brassica oleracea HOM05D004844 ORTHO05D006036 1.4e-12 77.4 250 35.2
FvH4_4g29570 Fragaria vesca HOM05D004844 ORTHO05D006036 7.0e-12 75.1 206 34.0
Dinv34035 Davidia involucrata HOM05D004844 ORTHO05D006036 1.7e-10 70.5 118 41.5
Pp3c13_7740 Physcomitrium patens HOM05D004844 ORTHO05D006036 2.3e-10 70.1 253 31.6
BcaC03g15030 Brassica carinata HOM05D004844 ORTHO05D006036 1.5e-09 67.4 238 32.4
HPP92_012261 Vanilla planifolia HOM05D004844 ORTHO05D006036 3.3e-09 66.2 243 29.6
FAN07G0902 Fragaria x ananassa HOM05D004844 ORTHO05D006036 6.2e-08 62.0 117 38.5
Oeu063767.1 Olea europaea HOM05D004844 ORTHO05D006036 2.3e-07 60.1 42 69.0
Actinidia04726 Actinidia chinensis HOM05D004844 ORTHO05D006036 5.2e-07 58.9 49 59.2
Actinidia04685 Actinidia chinensis HOM05D004844 ORTHO05D006036 6.8e-07 58.5 48 60.4
Actinidia04686 Actinidia chinensis HOM05D004844 ORTHO05D006036 6.8e-07 58.5 48 60.4
Actinidia04727 Actinidia chinensis HOM05D004844 ORTHO05D006036 6.8e-07 58.5 48 60.4
Actinidia27764 Actinidia chinensis HOM05D004844 ORTHO05D006036 6.8e-07 58.5 48 60.4
CBR_g4135 Chara braunii HOM05D004844 ORTHO05D006036 1.5e-06 57.4 136 34.6
SEGI_03778 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 7.5e-06 55.1 42 66.7
SEGI_27898 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 7.5e-06 55.1 42 66.7


User provided reference genes

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