Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_62.g23684 Utricularia gibba HOM05D006025 ORTHO05D008547 5.6e-170 600.9 310 100.0
Migut.L01348 Erythranthe guttata HOM05D006025 ORTHO05D008547 1.5e-87 327.0 292 62.7
SalBow8G3437 Salvia bowleyana HOM05D006025 ORTHO05D008547 3.8e-86 322.4 297 60.6
Migut.E00118 Erythranthe guttata HOM05D006025 ORTHO05D008547 3.2e-85 319.3 297 59.6
Nitab4.5_0000679g0100 Nicotiana tabacum HOM05D006025 ORTHO05D008547 3.2e-85 319.3 291 59.1
Actinidia31175 Actinidia chinensis HOM05D006025 ORTHO05D008547 2.7e-84 316.2 286 58.4
CAN.G27.7 Capsicum annuum HOM05D006025 ORTHO05D008547 4.7e-84 315.5 303 57.8
QL03p065944 Quercus lobata HOM05D006025 ORTHO05D008547 1.7e-81 307.0 282 56.7
Sed0022227 Sechium edule HOM05D006025 ORTHO05D008547 3.7e-81 305.8 292 56.5
Oeu044566.1 Olea europaea HOM05D006025 ORTHO05D008547 4.8e-81 305.4 283 56.9
MELO3C012062.2 Cucumis melo HOM05D006025 ORTHO05D008547 1.1e-80 304.3 276 58.7
Dinv34195 Davidia involucrata HOM05D006025 ORTHO05D008547 2.4e-80 303.1 289 57.1
Sc11g0001660 Simmondsia chinensis HOM05D006025 ORTHO05D008547 2.4e-80 303.1 266 60.9
Prupe.1G267200 Prunus persica HOM05D006025 ORTHO05D008547 3.1e-80 302.8 300 56.0
Manes.05G096000 Manihot esculenta HOM05D006025 ORTHO05D008547 5.3e-80 302.0 295 54.2
Hund25274 Selenicereus undatus HOM05D006025 ORTHO05D008547 5.3e-80 302.0 302 56.0
CsaV3_5G032300 Cucumis sativus L. HOM05D006025 ORTHO05D008547 1.2e-79 300.8 276 58.3
CiPaw.05G140400 Carya illinoinensis HOM05D006025 ORTHO05D008547 2.6e-79 299.7 288 55.2
ClCG05G024630 Citrullus lanatus HOM05D006025 ORTHO05D008547 3.5e-79 299.3 273 58.2
MD16G1079500 Malus domestica HOM05D006025 ORTHO05D008547 4.5e-79 298.9 282 58.9
Sopen05g002930 Solanum pennellii HOM05D006025 ORTHO05D008547 7.7e-79 298.1 292 56.8
CANSAT78G1034 Cannabis sativa HOM05D006025 ORTHO05D008547 1.0e-78 297.7 279 54.5
MSTRG.7831 Avicennia marina HOM05D006025 ORTHO05D008547 1.3e-78 297.4 277 58.1
COL.COLO4_36182 Corchorus olitorius HOM05D006025 ORTHO05D008547 1.3e-78 297.4 268 59.3
FAN12G1990 Fragaria x ananassa HOM05D006025 ORTHO05D008547 1.3e-78 297.4 289 57.1
vmacro16324 Vaccinium macrocarpon HOM05D006025 ORTHO05D008547 1.3e-78 297.4 292 56.2
Lj6A795T74 Lonicera japonica HOM05D006025 ORTHO05D008547 2.2e-78 296.6 276 58.7
PGR119G0173 Punica granatum HOM05D006025 ORTHO05D008547 2.2e-78 296.6 264 59.8
PGSC0003DMG400017619 Solanum tuberosum HOM05D006025 ORTHO05D008547 2.9e-78 296.2 289 56.4
FvH4_4g32070 Fragaria vesca HOM05D006025 ORTHO05D008547 3.8e-78 295.8 293 56.3
Thecc.02G232800 Theobroma cacao HOM05D006025 ORTHO05D008547 5.0e-78 295.4 284 56.0
Cc11_g13550 Coffea canephora HOM05D006025 ORTHO05D008547 6.5e-78 295.0 290 55.2
FAN22G0508 Fragaria x ananassa HOM05D006025 ORTHO05D008547 6.5e-78 295.0 280 58.2
MD13G1079600 Malus domestica HOM05D006025 ORTHO05D008547 6.5e-78 295.0 268 59.3
AL5G11850 Arabidopsis lyrata HOM05D006025 ORTHO05D008547 8.5e-78 294.7 283 56.5
Sp2g13810 Schrenkiella parvula HOM05D006025 ORTHO05D008547 8.5e-78 294.7 263 60.5
Rhsim12G0129700 Rhododendron simsii HOM05D006025 ORTHO05D008547 1.9e-77 293.5 268 59.3
Carub.0005s0158 Capsella rubella HOM05D006025 ORTHO05D008547 2.5e-77 293.1 277 57.0
Medtr5g037600 Medicago truncatula HOM05D006025 ORTHO05D008547 2.5e-77 293.1 286 55.9
FAN07G0827 Fragaria x ananassa HOM05D006025 ORTHO05D008547 3.2e-77 292.7 282 57.4
Lalb_Chr05g0217521 Lupinus albus HOM05D006025 ORTHO05D008547 4.2e-77 292.4 272 56.2
Phvul.002G080900 Phaseolus vulgaris HOM05D006025 ORTHO05D008547 4.2e-77 292.4 287 54.7
VMungo1215G1908 Vigna mungo HOM05D006025 ORTHO05D008547 4.2e-77 292.4 287 54.7
Thhalv10004613m.g Eutrema salsugineum HOM05D006025 ORTHO05D008547 5.5e-77 292.0 263 59.3
BraA09t37996Z Brassica rapa HOM05D006025 ORTHO05D008547 9.4e-77 291.2 301 54.5
Lj2g0002167 Lotus japonicus HOM05D006025 ORTHO05D008547 9.4e-77 291.2 298 54.4
BcaC06g31223 Brassica carinata HOM05D006025 ORTHO05D008547 1.2e-76 290.8 292 55.5
A09p23920 Brassica napus HOM05D006025 ORTHO05D008547 1.6e-76 290.4 301 54.2
Cfa009042 Carpinus fangiana HOM05D006025 ORTHO05D008547 1.6e-76 290.4 287 55.7
Lsat_1_v5_gn_3_49700 Lactuca sativa HOM05D006025 ORTHO05D008547 2.1e-76 290.0 299 53.2
BolC9t55941H Brassica oleracea HOM05D006025 ORTHO05D008547 2.7e-76 289.7 291 54.3
TPR.G26717 Trifolium pratense HOM05D006025 ORTHO05D008547 2.7e-76 289.7 294 53.4
AT2G02590 Arabidopsis thaliana HOM05D006025 ORTHO05D008547 3.6e-76 289.3 263 57.8
Ciclev10032129m.g Citrus clementina HOM05D006025 ORTHO05D008547 3.6e-76 289.3 267 55.4
Gohir.A05G321100 Gossypium hirsutum HOM05D006025 ORTHO05D008547 3.6e-76 289.3 284 55.6
TAR481G0011 Trochodendron aralioides HOM05D006025 ORTHO05D008547 3.6e-76 289.3 282 54.6
EL10Ac6g13142 Beta vulgaris HOM05D006025 ORTHO05D008547 6.1e-76 288.5 273 57.5
Gorai.009G347000 Gossypium raimondii HOM05D006025 ORTHO05D008547 6.1e-76 288.5 280 56.4
C09p30780 Brassica napus HOM05D006025 ORTHO05D008547 8.0e-76 288.1 294 53.7
TWI18G0579 Tripterygium wilfordii HOM05D006025 ORTHO05D008547 1.4e-75 287.3 288 53.5
GSVIVG01020079001 Vitis vinifera HOM05D006025 ORTHO05D008547 1.4e-75 287.3 289 54.0
Atru.chr11.1861 Acer truncatum HOM05D006025 ORTHO05D008547 1.8e-75 287.0 284 55.3
BcaC06g34048 Brassica carinata HOM05D006025 ORTHO05D008547 1.8e-75 287.0 286 55.6
C07p33300 Brassica napus HOM05D006025 ORTHO05D008547 2.3e-75 286.6 286 55.6
Ca_04692_v3 Cicer arietinum L. HOM05D006025 ORTHO05D008547 2.3e-75 286.6 281 55.5
RcHm_v2.0_Chr4g0440761 Rosa chinensis HOM05D006025 ORTHO05D008547 2.3e-75 286.6 295 54.6
BolC7t43841H Brassica oleracea HOM05D006025 ORTHO05D008547 3.0e-75 286.2 262 59.2
THA.LOC104805137 Tarenaya hassleriana HOM05D000131 ORTHO05D000086 3.0e-75 286.2 263 59.3
Potri.010G034400 Populus trichocarpa HOM05D006025 ORTHO05D008547 6.7e-75 285.0 284 53.9
Gohir.D05G323300 Gossypium hirsutum HOM05D006025 ORTHO05D008547 8.8e-75 284.6 280 55.4
arahy.Tifrunner.gnm1.ann1.1ZL8TB Arachis hypogaea HOM05D006025 ORTHO05D008547 1.2e-74 284.3 286 53.8
A06p43550 Brassica napus HOM05D006025 ORTHO05D008547 1.2e-74 284.3 262 58.4
BraA06t27240Z Brassica rapa HOM05D006025 ORTHO05D008547 1.2e-74 284.3 262 58.4
Sabra10G0030400 Salix brachista HOM05D006025 ORTHO05D008547 1.2e-74 284.3 284 53.5
SGA_v2.0_scaffold87G26972 Striga asiatica HOM05D006025 ORTHO05D008547 1.2e-74 284.3 303 52.8
DCAR_024490 Daucus carota HOM05D006025 ORTHO05D008547 2.0e-74 283.5 245 62.0
HanXRQChr15g0478181 Helianthus annuus HOM05D006025 ORTHO05D008547 2.0e-74 283.5 290 53.4
Peaxi162Scf00209g00517 Petunia axillaris HOM05D006025 ORTHO05D008547 2.0e-74 283.5 286 54.9
arahy.Tifrunner.gnm1.ann1.V5YJYF Arachis hypogaea HOM05D006025 ORTHO05D008547 2.6e-74 283.1 286 53.5
Glyma.01G040500 Glycine max HOM05D006025 ORTHO05D008547 2.6e-74 283.1 287 53.3
Duzib268G1145 Durio zibethinus HOM05D006025 ORTHO05D008547 4.4e-74 282.3 269 56.9
BcaC04g21520 Brassica carinata HOM05D006025 ORTHO05D008547 7.5e-74 281.6 282 55.3
Cpa.g.sc73.14 Carica papaya HOM05D006025 ORTHO05D008547 3.7e-73 279.3 267 55.8
Nitab4.5_0002969g0040 Nicotiana tabacum HOM05D006025 ORTHO05D008547 4.8e-73 278.9 289 54.7
CARHR145110 Cardamine hirsuta HOM05D006025 ORTHO05D008547 6.3e-73 278.5 283 54.4
Nn4g23031 Nelumbo nucifera HOM05D006025 ORTHO05D008547 1.1e-72 277.7 303 51.8
Aa31LG2G7560 Aethionema arabicum HOM05D006025 ORTHO05D008547 1.4e-72 277.3 263 56.3
Ah.03g132040 Amaranthus hybridus HOM05D006025 ORTHO05D008547 3.1e-72 276.2 264 58.0
Psat2g115440 Pisum sativum HOM05D006025 ORTHO05D008547 9.1e-72 274.6 286 52.4
PSO478G1322 Papaver somniferum HOM05D006025 ORTHO05D008547 1.6e-71 273.9 267 57.3
HanXRQChr17g0544581 Helianthus annuus HOM05D006025 ORTHO05D008547 7.7e-71 271.6 288 51.7
BcaB07g30697 Brassica carinata HOM05D006025 ORTHO05D008547 8.5e-70 268.1 268 56.3
Aqoxy3G00786 Aquilegia oxysepala HOM05D006025 ORTHO05D008547 1.1e-69 267.7 270 53.7
AUR62026262 Chenopodium quinoa HOM05D006025 ORTHO05D008547 1.1e-69 267.7 237 60.8
Os03g0800500 Oryza sativa ssp. japonica HOM05D006025 ORTHO05D008547 3.2e-69 266.2 239 58.6
MBI04_g22196_MAGBIO Magnolia biondii HOM05D006025 ORTHO05D008547 9.4e-69 264.6 235 58.7
ECA246G2177 Erigeron canadensis HOM05D006025 ORTHO05D008547 2.7e-68 263.1 244 57.8
Eucgr.B02589 Eucalyptus grandis HOM05D006025 ORTHO05D008547 6.1e-68 261.9 254 55.5
ATR0665G167 Amborella trichopoda HOM05D006025 ORTHO05D008547 1.0e-67 261.2 261 54.0
CSS0050443 Camellia sinensis var. sinensis HOM05D006025 ORTHO05D008547 3.0e-67 259.6 229 59.8
SalBow2G1916 Salvia bowleyana HOM05D006025 ORTHO05D008547 4.0e-67 259.2 288 51.7
AUR62026454 Chenopodium quinoa HOM05D006025 ORTHO05D008547 4.8e-65 252.3 237 59.9
Haze_12072 Corylus avellana HOM05D006025 ORTHO05D008547 4.8e-65 252.3 266 52.6
SEGI_16485 Sequoiadendron giganteum HOM05D006025 ORTHO05D008547 4.7e-60 235.7 260 49.6
Zm00001eb212770 Zea mays HOM05D006025 ORTHO05D008547 1.4e-56 224.2 237 51.1
AagrBONN_evm.TU.Sc2ySwM_117.678 Anthoceros agrestis HOM05D006025 ORTHO05D008547 4.5e-55 219.2 261 45.6
Mapoly0001s0092 Marchantia polymorpha HOM05D006025 ORTHO05D008547 6.6e-54 215.3 264 43.9
CBR_g39595 Chara braunii HOM05D006025 ORTHO05D008547 1.6e-52 210.7 247 44.9
SMO147G0037 Selaginella moellendorffii HOM05D006025 ORTHO05D008547 2.1e-52 210.3 249 45.8
Pp3c22_2360 Physcomitrium patens HOM05D006025 ORTHO05D008547 6.8e-51 205.3 273 42.9
CDE07G0470 Ceratophyllum demersum HOM05D006025 ORTHO05D008547 1.1e-45 188.0 211 51.7
HPP92_018837 Vanilla planifolia HOM05D006025 ORTHO05D008547 4.7e-44 182.6 131 68.7
SEGI_34054 Sequoiadendron giganteum HOM05D006025 ORTHO05D008547 7.8e-31 138.7 110 61.8
CDE06G2488 Ceratophyllum demersum HOM05D006025 ORTHO05D008547 1.3e-25 121.3 215 37.7
Solyc05g006965.1 Solanum lycopersicum HOM05D006025 ORTHO05D008547 6.0e-23 112.5 219 36.1
Glyma.02G024100 Glycine max HOM05D006025 ORTHO05D008547 1.3e-22 111.3 140 43.6
Hma1.2p1_0808F.1_g221580 Hydrangea macrophylla HOM05D006025 ORTHO05D008547 5.8e-18 95.9 80 58.8
Hma1.2p1_0513F.1_g169540 Hydrangea macrophylla HOM05D006025 ORTHO05D008547 7.6e-18 95.5 80 58.8
DCAR_001229 Daucus carota HOM05D006025 ORTHO05D008547 5.8e-10 69.3 50 70.0
Zm00001eb151370 Zea mays HOM05D006025 ORTHO05D443914 1.0e-06 58.5 47 57.4
Dinv16285 Davidia involucrata HOM05D000027 ORTHO05D000500 2.3e-06 57.4 120 38.3


User provided reference genes

Program Settings