Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_62.g23652 Utricularia gibba HOM05D005988 ORTHO05D007392 9.6e-49 196.4 94 100.0
BcaB05g24271 Brassica carinata HOM05D005988 ORTHO05D007392 4.3e-33 144.4 94 71.3
BcaB05g24277 Brassica carinata HOM05D005988 ORTHO05D007392 4.3e-33 144.4 94 71.3
BcaC08g46168 Brassica carinata HOM05D005988 ORTHO05D007392 4.3e-33 144.4 94 71.3
A07p33950 Brassica napus HOM05D005988 ORTHO05D007392 9.6e-33 143.3 94 70.2
C06p42910 Brassica napus HOM05D005988 ORTHO05D007392 2.1e-32 142.1 93 69.9
TPR.G34164 Trifolium pratense HOM05D005988 ORTHO05D007392 2.8e-32 141.7 86 73.3
Atru.chr11.2323 Acer truncatum HOM05D005988 ORTHO05D007392 4.8e-32 141.0 93 69.9
Ca_18034_v3 Cicer arietinum L. HOM05D005988 ORTHO05D007392 4.8e-32 141.0 90 68.9
Lalb_Chr07g0187141 Lupinus albus HOM05D005988 ORTHO05D007392 4.8e-32 141.0 90 71.1
Cpa.g.sc43.58 Carica papaya HOM05D005988 ORTHO05D007392 6.2e-32 140.6 91 71.4
Psat0s2314g0040 Pisum sativum HOM05D005988 ORTHO05D007392 6.2e-32 140.6 90 70.0
COL.COLO4_20400 Corchorus olitorius HOM05D005988 ORTHO05D007392 8.1e-32 140.2 94 70.2
PSO017G5437 Papaver somniferum HOM05D005988 ORTHO05D007392 8.1e-32 140.2 84 75.0
Sp5g22300 Schrenkiella parvula HOM05D005988 ORTHO05D007392 8.1e-32 140.2 92 68.5
BcaB03g15204 Brassica carinata HOM05D005988 ORTHO05D007392 1.1e-31 139.8 93 69.9
Gohir.D02G149200 Gossypium hirsutum HOM05D005988 ORTHO05D007392 1.1e-31 139.8 95 71.6
Gorai.005G167100 Gossypium raimondii HOM05D005988 ORTHO05D007392 1.1e-31 139.8 95 71.6
Hma1.2p1_0065F.1_g035500 Hydrangea macrophylla HOM05D005988 ORTHO05D007392 1.1e-31 139.8 93 71.0
Sc15g0005560 Simmondsia chinensis HOM05D005988 ORTHO05D007392 1.4e-31 139.4 85 69.4
Sc15g0005760 Simmondsia chinensis HOM05D005988 ORTHO05D007392 1.4e-31 139.4 85 69.4
Aa31sc377G10 Aethionema arabicum HOM05D005988 ORTHO05D007392 1.8e-31 139.0 94 69.1
arahy.Tifrunner.gnm1.ann1.5IUK3V Arachis hypogaea HOM05D005988 ORTHO05D007392 1.8e-31 139.0 89 67.4
Thhalv10019308m.g Eutrema salsugineum HOM05D005988 ORTHO05D007392 1.8e-31 139.0 90 68.9
Glyma.05G147302 Glycine max HOM05D005988 ORTHO05D007392 1.8e-31 139.0 87 70.1
Glyma.08G104300 Glycine max HOM05D005988 ORTHO05D007392 1.8e-31 139.0 87 70.1
Medtr8g080630 Medicago truncatula HOM05D005988 ORTHO05D007392 1.8e-31 139.0 91 69.2
PGR102G1123 Punica granatum HOM05D005988 ORTHO05D007392 1.8e-31 139.0 84 72.6
THA.LOC109117182 Tarenaya hassleriana HOM05D005988 ORTHO05D007392 1.8e-31 139.0 92 68.5
TPR.G17077 Trifolium pratense HOM05D005988 ORTHO05D007392 1.8e-31 139.0 86 72.1
CARHR059890 Cardamine hirsuta HOM05D005988 ORTHO05D007392 2.4e-31 138.7 94 69.1
Duzib251G0424 Durio zibethinus HOM05D005988 ORTHO05D007392 2.4e-31 138.7 94 68.1
Duzib251G0426 Durio zibethinus HOM05D005988 ORTHO05D007392 2.4e-31 138.7 95 67.4
Aqoxy3G00796 Aquilegia oxysepala HOM05D005988 ORTHO05D007392 3.1e-31 138.3 84 72.6
Gohir.A03G126200 Gossypium hirsutum HOM05D005988 ORTHO05D007392 3.1e-31 138.3 95 70.5
Manes.13G012300 Manihot esculenta HOM05D005988 ORTHO05D007392 3.1e-31 138.3 84 73.8
Phvul.L002046 Phaseolus vulgaris HOM05D005988 ORTHO05D007392 3.1e-31 138.3 87 70.1
arahy.Tifrunner.gnm1.ann1.CH2TLP Arachis hypogaea HOM05D005988 ORTHO05D007392 4.0e-31 137.9 87 69.0
arahy.Tifrunner.gnm1.ann1.NCU5C9 Arachis hypogaea HOM05D005988 ORTHO05D007392 4.0e-31 137.9 87 69.0
arahy.Tifrunner.gnm1.ann1.XY4E2W Arachis hypogaea HOM05D005988 ORTHO05D007392 4.0e-31 137.9 89 66.3
BcaC03g14837 Brassica carinata HOM05D005988 ORTHO05D007392 4.0e-31 137.9 91 68.1
A02p14180 Brassica napus HOM05D005988 ORTHO05D007392 4.0e-31 137.9 91 68.1
C02p22980 Brassica napus HOM05D005988 ORTHO05D007392 4.0e-31 137.9 91 68.1
BraA02t06481Z Brassica rapa HOM05D005988 ORTHO05D007392 4.0e-31 137.9 91 68.1
AT1G67350 Arabidopsis thaliana HOM05D005988 ORTHO05D007392 5.3e-31 137.5 94 68.1
Prupe.1G225900 Prunus persica HOM05D005988 ORTHO05D007392 5.3e-31 137.5 92 67.4
RcHm_v2.0_Chr4g0430261 Rosa chinensis HOM05D005988 ORTHO05D007392 5.3e-31 137.5 84 73.8
Nitab4.5_0005361g0020 Nicotiana tabacum HOM05D005988 ORTHO05D007392 6.9e-31 137.1 90 70.0
Rhsim04G0162300 Rhododendron simsii HOM05D005988 ORTHO05D007392 6.9e-31 137.1 93 65.6
Sed0026530 Sechium edule HOM05D005988 ORTHO05D007392 6.9e-31 137.1 84 75.0
CiPaw.05G109900 Carya illinoinensis HOM05D005988 ORTHO05D007392 9.0e-31 136.7 84 73.8
FvH4_4g23770 Fragaria vesca HOM05D005988 ORTHO05D007392 9.0e-31 136.7 83 73.5
FAN07G1208 Fragaria x ananassa HOM05D005988 ORTHO05D007392 9.0e-31 136.7 83 73.5
FAN12G0190 Fragaria x ananassa HOM05D005988 ORTHO05D007392 9.0e-31 136.7 83 73.5
FAN17G2984 Fragaria x ananassa HOM05D005988 ORTHO05D007392 9.0e-31 136.7 83 73.5
Nitab4.5_0006506g0010 Nicotiana tabacum HOM05D005988 ORTHO05D007392 9.0e-31 136.7 90 70.0
Hund13388 Selenicereus undatus HOM05D005988 ORTHO05D007392 9.0e-31 136.7 85 69.4
EL10Ac2g02768 Beta vulgaris HOM05D005988 ORTHO05D007392 1.2e-30 136.3 88 68.2
Cfa009369 Carpinus fangiana HOM05D005988 ORTHO05D007392 1.2e-30 136.3 84 73.8
ClCG11G013680 Citrullus lanatus HOM05D005988 ORTHO05D007392 1.2e-30 136.3 90 68.9
Haze_12418 Corylus avellana HOM05D005988 ORTHO05D007392 1.2e-30 136.3 84 73.8
CSS0025775 Camellia sinensis var. sinensis HOM05D005988 ORTHO05D007392 1.5e-30 136.0 94 66.0
Cc11_g16890 Coffea canephora HOM05D005988 ORTHO05D007392 1.5e-30 136.0 84 73.8
DCAR_031202 Daucus carota HOM05D005988 ORTHO05D007392 1.5e-30 136.0 91 68.1
Lj4g0004056 Lotus japonicus HOM05D005988 ORTHO05D007392 1.5e-30 136.0 86 68.6
Thecc.02G210500 Theobroma cacao HOM05D005988 ORTHO05D007392 1.5e-30 136.0 91 67.0
vmacro01331 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 1.5e-30 136.0 93 65.6
AL2G25900 Arabidopsis lyrata HOM05D005988 ORTHO05D007392 2.0e-30 135.6 94 67.0
ECA233G0411 Erigeron canadensis HOM05D005988 ORTHO05D007392 2.0e-30 135.6 93 65.6
MBI01_g01248_MAGBIO Magnolia biondii HOM05D005988 ORTHO05D007392 2.0e-30 135.6 84 71.4
vmacro05591 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 2.0e-30 135.6 92 66.3
vmacro23425 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 2.0e-30 135.6 92 66.3
CANSAT01G3258 Cannabis sativa HOM05D005988 ORTHO05D007392 2.6e-30 135.2 85 71.8
Carub.0002s1364 Capsella rubella HOM05D005988 ORTHO05D007392 2.6e-30 135.2 94 67.0
Potri.001G055400 Populus trichocarpa HOM05D005988 ORTHO05D007392 3.4e-30 134.8 84 72.6
Migut.E00018 Erythranthe guttata HOM05D005988 ORTHO05D007392 4.5e-30 134.4 94 69.1
Manes.12G011400 Manihot esculenta HOM05D005988 ORTHO05D007392 4.5e-30 134.4 85 69.4
AUR62034347 Chenopodium quinoa HOM05D005988 ORTHO05D007392 5.8e-30 134.0 84 67.9
MELO3C011867.2 Cucumis melo HOM05D005988 ORTHO05D007392 5.8e-30 134.0 90 67.8
AUR62022358 Chenopodium quinoa HOM05D005988 ORTHO05D007392 7.6e-30 133.7 83 68.7
Rhsim12G0099600 Rhododendron simsii HOM05D005988 ORTHO05D007392 7.6e-30 133.7 93 65.6
Sabra01G0040000 Salix brachista HOM05D005988 ORTHO05D007392 9.9e-30 133.3 84 71.4
Sabra03G0126500 Salix brachista HOM05D005988 ORTHO05D007392 9.9e-30 133.3 84 71.4
Potri.003G173000 Populus trichocarpa HOM05D005988 ORTHO05D007392 1.3e-29 132.9 84 70.2
CAN.G875.9 Capsicum annuum HOM05D005988 ORTHO05D007392 1.7e-29 132.5 90 67.8
CsaV3_5G030290 Cucumis sativus L. HOM05D005988 ORTHO05D007392 1.7e-29 132.5 90 66.7
Nn4g22324 Nelumbo nucifera HOM05D005988 ORTHO05D007392 1.7e-29 132.5 85 67.1
CDE06G1110 Ceratophyllum demersum HOM05D005988 ORTHO05D007392 2.2e-29 132.1 83 69.9
MD16G1119100 Malus domestica HOM05D005988 ORTHO05D007392 4.9e-29 131.0 80 73.8
PGSC0003DMG400017679 Solanum tuberosum HOM05D005988 ORTHO05D007392 6.4e-29 130.6 84 71.4
ATR0582G290 Amborella trichopoda HOM05D005988 ORTHO05D007392 8.4e-29 130.2 83 67.5
Eucgr.B03491 Eucalyptus grandis HOM05D005988 ORTHO05D007392 8.4e-29 130.2 88 68.2
HPP92_012485 Vanilla planifolia HOM05D005988 ORTHO05D007392 1.1e-28 129.8 83 68.7
Solyc04g045620.3 Solanum lycopersicum HOM05D005988 ORTHO05D007392 1.4e-28 129.4 86 69.8
Sopen04g017580 Solanum pennellii HOM05D005988 ORTHO05D007392 1.4e-28 129.4 86 69.8
HanXRQChr12g0372221 Helianthus annuus HOM05D005988 ORTHO05D007392 1.9e-28 129.0 89 65.2
QL03p052764 Quercus lobata HOM05D005988 ORTHO05D007392 1.9e-28 129.0 85 63.5
Lalb_Chr13g0294321 Lupinus albus HOM05D005988 ORTHO05D007392 2.5e-28 128.6 83 68.7
FAN22G1192 Fragaria x ananassa HOM05D005988 ORTHO05D007392 3.2e-28 128.3 79 72.2
Peaxi162Scf00038g00014 Petunia axillaris HOM05D005988 ORTHO05D007392 4.2e-28 127.9 91 63.7
Ah.10g030080 Amaranthus hybridus HOM05D005988 ORTHO05D007392 5.5e-28 127.5 79 69.6
GSVIVG01010482001 Vitis vinifera HOM05D005988 ORTHO05D007392 5.5e-28 127.5 85 65.9
Zm00001eb422590 Zea mays HOM05D005988 ORTHO05D007392 9.3e-28 126.7 94 61.7
Zm00001eb290200 Zea mays HOM05D005988 ORTHO05D007392 2.7e-27 125.2 94 62.8
Os03g0685900 Oryza sativa ssp. japonica HOM05D005988 ORTHO05D007392 6.0e-27 124.0 93 59.1
SalBow8G0976 Salvia bowleyana HOM05D005988 ORTHO05D007392 6.0e-27 124.0 88 64.8
Actinidia08072 Actinidia chinensis HOM05D005988 ORTHO05D007392 7.9e-27 123.6 89 65.2
Nitab4.5_0000060g0090 Nicotiana tabacum HOM05D005988 ORTHO05D007392 1.0e-26 123.2 80 70.0
DCAR_024095 Daucus carota HOM05D005988 ORTHO05D007392 4.3e-25 117.9 78 64.1
SGA_v2.0_scaffold144G35838 Striga asiatica HOM05D005988 ORTHO05D007392 2.8e-24 115.2 90 61.1
TWI75G1041 Tripterygium wilfordii HOM05D005988 ORTHO05D007392 6.2e-24 114.0 91 61.5
MD13G1118900 Malus domestica HOM05D005988 ORTHO05D007392 8.2e-24 113.6 69 72.5
Lalb_Chr23g0278031 Lupinus albus HOM05D005988 ORTHO05D007392 1.4e-23 112.8 86 61.6
TWI18G1296 Tripterygium wilfordii HOM05D005988 ORTHO05D007392 1.4e-23 112.8 85 61.2
Lalb_Chr23g0278041 Lupinus albus HOM05D005988 ORTHO05D007392 6.9e-23 110.5 89 58.4
Migut.G00897 Erythranthe guttata HOM05D005988 ORTHO05D007392 1.7e-21 105.9 70 70.0
Migut.O00848 Erythranthe guttata HOM05D005988 ORTHO05D007392 1.7e-21 105.9 70 70.0
Lsat_1_v5_gn_7_95720 Lactuca sativa HOM05D005988 ORTHO05D007392 3.8e-21 104.8 71 64.8
CBR_g8533 Chara braunii HOM05D005988 ORTHO05D007392 3.0e-18 95.1 92 45.7
Pp3c3_5450 Physcomitrium patens HOM05D005988 ORTHO05D007392 1.9e-17 92.4 89 44.9
Mapoly0011s0010 Marchantia polymorpha HOM05D005988 ORTHO05D007392 6.9e-15 84.0 78 48.7
TAR629G1917 Trochodendron aralioides HOM05D000133 ORTHO05D002928 2.2e-13 79.0 57 56.1
Nitab4.5_0001404g0080 Nicotiana tabacum HOM05D005988 ORTHO05D007392 7.2e-12 73.9 58 55.2
AagrBONN_evm.TU.Sc2ySwM_117.535 Anthoceros agrestis HOM05D005988 ORTHO05D007392 2.7e-11 72.0 76 40.8
BcaB05g24274 Brassica carinata HOM05D005988 ORTHO05D007392 2.3e-10 68.9 86 50.0
SMO356G0160 Selaginella moellendorffii HOM05D005988 ORTHO05D007392 1.1e-09 66.6 80 37.5
Actinidia30649 Actinidia chinensis HOM05D005988 ORTHO05D007392 1.7e-08 62.8 41 73.2
arahy.Tifrunner.gnm1.ann1.BFR0IC Arachis hypogaea HOM05D005988 ORTHO05D007392 4.1e-07 58.2 72 43.1
Zm00001eb053260 Zea mays HOM05D005988 ORTHO05D007392 7.7e-06 53.9 36 66.7


User provided reference genes

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