Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_62.g23577 Utricularia gibba HOM05D004918 ORTHO05D005706 2.1e-143 512.3 254 100.0
Migut.I00673 Erythranthe guttata HOM05D004918 ORTHO05D005706 2.9e-55 219.5 260 45.8
Thecc.06G046100 Theobroma cacao HOM05D004918 ORTHO05D005706 8.3e-55 218.0 252 44.4
SalBow8G2778 Salvia bowleyana HOM05D004918 ORTHO05D005706 9.2e-54 214.5 234 47.4
MSTRG.22808 Avicennia marina HOM05D004918 ORTHO05D005706 1.2e-53 214.2 252 46.0
Duzib192G0308 Durio zibethinus HOM05D004918 ORTHO05D005706 1.9e-51 206.8 250 42.8
Potri.003G184701 Populus trichocarpa HOM05D004918 ORTHO05D005706 9.5e-51 204.5 262 43.5
DCAR_025541 Daucus carota HOM05D004918 ORTHO05D005706 1.2e-50 204.1 232 44.4
Oeu004556.1 Olea europaea HOM05D004918 ORTHO05D005706 1.2e-50 204.1 254 43.7
Sabra03G0135200 Salix brachista HOM05D004918 ORTHO05D005706 3.6e-50 202.6 250 44.4
SGA_v2.0_scaffold419G51286 Striga asiatica HOM05D004918 ORTHO05D005706 8.0e-50 201.4 235 46.4
CSS0025832 Camellia sinensis var. sinensis HOM05D004918 ORTHO05D005706 1.0e-49 201.1 250 43.2
Gorai.009G122300 Gossypium raimondii HOM05D004918 ORTHO05D005706 1.4e-49 200.7 246 41.5
Ciclev10026430m.g Citrus clementina HOM05D004918 ORTHO05D005706 2.3e-49 199.9 243 44.9
Manes.11G069000 Manihot esculenta HOM05D004918 ORTHO05D005706 3.1e-49 199.5 263 42.2
Gohir.A05G117500 Gossypium hirsutum HOM05D004918 ORTHO05D005706 5.2e-49 198.7 246 41.1
SalBow8G2909 Salvia bowleyana HOM05D004918 ORTHO05D005706 8.9e-49 198.0 223 47.1
Cpa.g.sc14.108 Carica papaya HOM05D004918 ORTHO05D005706 3.4e-48 196.1 246 43.5
Sc05g0005820 Simmondsia chinensis HOM05D004918 ORTHO05D005706 3.4e-48 196.1 258 43.4
TAR625G0238 Trochodendron aralioides HOM05D004918 ORTHO05D005706 4.4e-48 195.7 234 44.4
ClCG10G012810 Citrullus lanatus HOM05D004918 ORTHO05D005706 5.8e-48 195.3 254 46.1
Nn2g12451 Nelumbo nucifera HOM05D004918 ORTHO05D005706 5.8e-48 195.3 242 43.8
Cc04_g05650 Coffea canephora HOM05D004918 ORTHO05D005706 7.5e-48 194.9 232 45.3
Dinv23270 Davidia involucrata HOM05D004918 ORTHO05D005706 9.8e-48 194.5 261 41.4
Cc04_g05280 Coffea canephora HOM05D004918 ORTHO05D005706 1.3e-47 194.1 232 45.7
Actinidia25464 Actinidia chinensis HOM05D004918 ORTHO05D005706 1.7e-47 193.7 239 45.2
GSVIVG01016107001 Vitis vinifera HOM05D004918 ORTHO05D005706 2.2e-47 193.4 247 44.5
PGR102G0155 Punica granatum HOM05D004918 ORTHO05D005706 2.9e-47 193.0 253 42.3
Nn2g14031 Nelumbo nucifera HOM05D004918 ORTHO05D005706 4.9e-47 192.2 254 42.1
MELO3C028676.2 Cucumis melo HOM05D004918 ORTHO05D005706 1.4e-46 190.7 229 47.2
HanXRQChr16g0499441 Helianthus annuus HOM05D004918 ORTHO05D005706 1.9e-46 190.3 239 44.4
CsaV3_3G032650 Cucumis sativus L. HOM05D004918 ORTHO05D005706 4.1e-46 189.1 234 45.3
Lj6g0018730 Lotus japonicus HOM05D004918 ORTHO05D005706 1.6e-45 187.2 256 40.6
vmacro19072 Vaccinium macrocarpon HOM05D004918 ORTHO05D005706 2.0e-45 186.8 243 42.4
TWI12G0375 Tripterygium wilfordii HOM05D004918 ORTHO05D005706 2.7e-45 186.4 249 41.0
Atru.chr1.2801 Acer truncatum HOM05D004918 ORTHO05D005706 1.3e-44 184.1 250 40.0
arahy.Tifrunner.gnm1.ann1.T9YNFF Arachis hypogaea HOM05D004918 ORTHO05D005706 1.7e-44 183.7 245 43.3
ECA232G4560 Erigeron canadensis HOM05D004918 ORTHO05D005706 1.7e-44 183.7 254 42.5
Eucgr.F03982 Eucalyptus grandis HOM05D004918 ORTHO05D005706 2.3e-44 183.3 235 45.5
Hma1.2p1_1914F.1_g307380 Hydrangea macrophylla HOM05D004918 ORTHO05D005706 2.3e-44 183.3 228 44.3
HanXRQChr17g0561891 Helianthus annuus HOM05D004918 ORTHO05D005706 3.9e-44 182.6 238 43.3
Atru.chr8.1159 Acer truncatum HOM05D004918 ORTHO05D005706 8.6e-44 181.4 251 40.2
THA.LOC104808174 Tarenaya hassleriana HOM05D004918 ORTHO05D005706 8.6e-44 181.4 250 40.4
arahy.Tifrunner.gnm1.ann1.ZUNL57 Arachis hypogaea HOM05D004918 ORTHO05D005706 2.5e-43 179.9 239 42.7
CANSAT35G0550 Cannabis sativa HOM05D004918 ORTHO05D005706 5.6e-43 178.7 257 40.1
VMungo1309G0542 Vigna mungo HOM05D004918 ORTHO05D005706 7.3e-43 178.3 256 41.0
Aa31LG7G620 Aethionema arabicum HOM05D004918 ORTHO05D005706 9.5e-43 177.9 241 38.6
Ah.01g002790 Amaranthus hybridus HOM05D004918 ORTHO05D005706 9.5e-43 177.9 240 42.5
BraA06t24376Z Brassica rapa HOM05D004918 ORTHO05D005706 1.2e-42 177.6 240 41.7
Peaxi162Scf00314g01045 Petunia axillaris HOM05D004918 ORTHO05D005706 1.2e-42 177.6 236 41.1
A06p12070 Brassica napus HOM05D004918 ORTHO05D005706 1.6e-42 177.2 239 41.4
Medtr3g110270 Medicago truncatula HOM05D004918 ORTHO05D005706 2.1e-42 176.8 240 42.1
COL.COLO4_24896 Corchorus olitorius HOM05D004918 ORTHO05D005706 2.8e-42 176.4 243 40.3
AL1G28210 Arabidopsis lyrata HOM05D004918 ORTHO05D005706 3.6e-42 176.0 247 39.3
Carub.0001s1585 Capsella rubella HOM05D004918 ORTHO05D005706 3.6e-42 176.0 248 40.7
BcaB02g06654 Brassica carinata HOM05D004918 ORTHO05D005706 4.7e-42 175.6 244 39.8
CARHR016550 Cardamine hirsuta HOM05D004918 ORTHO05D005706 4.7e-42 175.6 242 40.5
Sed0025979 Sechium edule HOM05D004918 ORTHO05D005706 4.7e-42 175.6 237 42.2
Cfa001859 Carpinus fangiana HOM05D004918 ORTHO05D005706 6.2e-42 175.3 238 41.2
Lalb_Chr13g0301111 Lupinus albus HOM05D004918 ORTHO05D005706 6.2e-42 175.3 246 39.8
Prupe.3G103300 Prunus persica HOM05D004918 ORTHO05D005706 6.2e-42 175.3 248 41.1
A08p31410 Brassica napus HOM05D004918 ORTHO05D005706 8.1e-42 174.9 247 38.9
BraA08t35064Z Brassica rapa HOM05D004918 ORTHO05D005706 8.1e-42 174.9 247 38.9
BcaC05g25623 Brassica carinata HOM05D004918 ORTHO05D005706 1.1e-41 174.5 250 39.2
C05p14240 Brassica napus HOM05D004918 ORTHO05D005706 1.1e-41 174.5 250 39.2
Nitab4.5_0004738g0120 Nicotiana tabacum HOM05D004918 ORTHO05D005706 1.4e-41 174.1 253 39.9
MD12G1013200 Malus domestica HOM05D004918 ORTHO05D005706 1.8e-41 173.7 248 41.9
CDE02G0643 Ceratophyllum demersum HOM05D004918 ORTHO05D005706 3.1e-41 172.9 247 40.1
RcHm_v2.0_Chr2g0132361 Rosa chinensis HOM05D004918 ORTHO05D005706 3.1e-41 172.9 248 40.7
A09p61040 Brassica napus HOM05D004918 ORTHO05D005706 4.0e-41 172.6 242 38.4
Glyma.09G000800 Glycine max HOM05D004918 ORTHO05D005706 4.0e-41 172.6 245 40.4
PSO729G0217 Papaver somniferum HOM05D004918 ORTHO05D005706 5.2e-41 172.2 238 40.8
PSO724G0600 Papaver somniferum HOM05D004918 ORTHO05D005706 6.8e-41 171.8 238 40.8
THA.LOC104812419 Tarenaya hassleriana HOM05D004918 ORTHO05D005706 6.8e-41 171.8 261 36.8
C08p17380 Brassica napus HOM05D004918 ORTHO05D005706 8.9e-41 171.4 246 37.8
BolC8t49364H Brassica oleracea HOM05D004918 ORTHO05D005706 8.9e-41 171.4 246 37.8
Nitab4.5_0002700g0180 Nicotiana tabacum HOM05D004918 ORTHO05D005706 8.9e-41 171.4 253 39.1
Psat5g020280 Pisum sativum HOM05D004918 ORTHO05D005706 8.9e-41 171.4 250 40.4
FAN09G4697 Fragaria x ananassa HOM05D004918 ORTHO05D005706 1.2e-40 171.0 243 39.9
PSO017G2949 Papaver somniferum HOM05D004918 ORTHO05D005706 1.5e-40 170.6 238 40.8
BcaB03g14507 Brassica carinata HOM05D004918 ORTHO05D005706 2.0e-40 170.2 255 37.3
TPR.G15094 Trifolium pratense HOM05D004918 ORTHO05D005706 2.0e-40 170.2 246 40.2
Sp1g14360 Schrenkiella parvula HOM05D004918 ORTHO05D005706 2.6e-40 169.9 245 39.2
C08p44630 Brassica napus HOM05D000031 ORTHO05D007294 4.4e-40 169.1 234 38.9
CiPaw.02G163500 Carya illinoinensis HOM05D004918 ORTHO05D005706 4.4e-40 169.1 258 39.1
BraA09t41477Z Brassica rapa HOM05D004918 ORTHO05D005706 5.8e-40 168.7 238 37.4
MD14G1138800 Malus domestica HOM05D004918 ORTHO05D005706 5.8e-40 168.7 250 41.6
PSO063G6564 Papaver somniferum HOM05D004918 ORTHO05D005706 1.7e-39 167.2 234 39.3
SEGI_14369 Sequoiadendron giganteum HOM05D004918 ORTHO05D005706 2.2e-39 166.8 257 38.1
arahy.Tifrunner.gnm1.ann1.BN6NH6 Arachis hypogaea HOM05D004918 ORTHO05D005706 2.9e-39 166.4 239 40.2
BcaC07g38802 Brassica carinata HOM05D004918 ORTHO05D005706 2.9e-39 166.4 254 37.0
BolC5t30156H Brassica oleracea HOM05D004918 ORTHO05D005706 4.9e-39 165.6 251 38.6
arahy.Tifrunner.gnm1.ann1.U5XJV3 Arachis hypogaea HOM05D004918 ORTHO05D005706 6.4e-39 165.2 235 40.4
CiPaw.01G073400 Carya illinoinensis HOM05D004918 ORTHO05D005706 6.4e-39 165.2 235 39.1
PGSC0003DMG400014153 Solanum tuberosum HOM05D004918 ORTHO05D005706 6.4e-39 165.2 253 37.9
Phvul.009G194500 Phaseolus vulgaris HOM05D004918 ORTHO05D005706 8.3e-39 164.9 246 38.6
BolC8t52009H Brassica oleracea HOM05D000031 ORTHO05D007294 1.4e-38 164.1 241 37.3
Thhalv10008658m.g Eutrema salsugineum HOM05D004918 ORTHO05D005706 1.4e-38 164.1 242 39.7
HanXRQChr10g0298641 Helianthus annuus HOM05D004918 ORTHO05D005706 1.9e-38 163.7 227 42.3
Sopen03g036560 Solanum pennellii HOM05D004918 ORTHO05D005706 1.9e-38 163.7 260 37.3
Lsat_1_v5_gn_4_85101 Lactuca sativa HOM05D004918 ORTHO05D005706 2.4e-38 163.3 223 43.9
QL10p031453 Quercus lobata HOM05D004918 ORTHO05D005706 1.2e-37 161.0 234 40.2
AT1G16040 Arabidopsis thaliana HOM05D004918 ORTHO05D005706 2.1e-37 160.2 227 39.6
EL10Ac4g09605 Beta vulgaris HOM05D004918 ORTHO05D005706 2.7e-37 159.8 228 39.9
BcaB03g13048 Brassica carinata HOM05D004918 ORTHO05D005706 3.5e-37 159.5 245 38.8
Solyc03g117650.4 Solanum lycopersicum HOM05D004918 ORTHO05D005706 4.6e-37 159.1 244 38.9
PGSC0003DMG402014462 Solanum tuberosum HOM05D004918 ORTHO05D005706 1.3e-36 157.5 240 36.7
MBI19_g12142_MAGBIO Magnolia biondii HOM05D004918 ORTHO05D005706 3.9e-36 156.0 254 37.8
Rhsim08G0203200 Rhododendron simsii HOM05D004918 ORTHO05D005706 1.1e-35 154.5 219 41.6
Zm00001eb403520 Zea mays HOM05D004918 ORTHO05D005706 4.3e-35 152.5 244 38.9
FAN02G2144 Fragaria x ananassa HOM05D004918 ORTHO05D005706 7.3e-35 151.8 258 37.2
FAN09G3573 Fragaria x ananassa HOM05D004918 ORTHO05D005706 1.6e-34 150.6 243 38.3
Oeu035883.1 Olea europaea HOM05D004918 ORTHO05D005706 4.7e-34 149.1 214 41.6
ATR0568G024 Amborella trichopoda HOM05D004918 ORTHO05D005706 1.8e-33 147.1 161 46.0
SHI05687 Sapria himalayana HOM05D004918 ORTHO05D005706 8.9e-33 144.8 228 39.0
Sopen12g021620 Solanum pennellii HOM05D004918 ORTHO05D005706 1.5e-32 144.1 240 35.4
Solyc12g042530.2 Solanum lycopersicum HOM05D004918 ORTHO05D005706 5.8e-32 142.1 240 35.4
HPP92_001544 Vanilla planifolia HOM05D004918 ORTHO05D005706 1.3e-31 141.0 254 35.0
Os03g0129000 Oryza sativa ssp. japonica HOM05D004918 ORTHO05D005706 1.7e-31 140.6 230 37.8
Glyma.09G000900 Glycine max HOM05D004918 ORTHO05D005706 2.9e-31 139.8 160 47.5
CAN.G276.2 Capsicum annuum HOM05D004918 ORTHO05D005706 3.0e-28 129.8 181 43.1
Aqoxy4G02614 Aquilegia oxysepala HOM05D004918 ORTHO05D005706 1.5e-27 127.5 142 44.4
Haze_16687 Corylus avellana HOM05D004918 ORTHO05D005706 5.6e-27 125.6 222 37.4
Pp3c8_15970 Physcomitrium patens HOM05D004918 ORTHO05D005706 6.9e-25 118.6 251 33.9
Mapoly0005s0096 Marchantia polymorpha HOM05D004918 ORTHO05D005706 2.6e-24 116.7 236 30.1
CBR_g41678 Chara braunii HOM05D004918 ORTHO05D005706 1.7e-23 114.0 139 39.6
Ca_15577_v3 Cicer arietinum L. HOM05D004918 ORTHO05D005706 4.2e-22 109.4 124 50.0
FAN14G3036 Fragaria x ananassa HOM05D004918 ORTHO05D005706 4.2e-22 109.4 271 32.5
Os10g0200800 Oryza sativa ssp. japonica HOM05D004918 ORTHO05D005706 4.2e-22 109.4 73 64.4
SMO351G0301 Selaginella moellendorffii HOM05D004918 ORTHO05D005706 1.2e-21 107.8 169 38.5
CAN.G1008.5 Capsicum annuum HOM05D000348 ORTHO05D005706 7.3e-19 98.6 144 41.7
Gohir.D05G118400 Gossypium hirsutum HOM05D004918 ORTHO05D005706 3.6e-18 96.3 161 34.8
AagrBONN_evm.TU.Sc2ySwM_344.4108 Anthoceros agrestis HOM05D004918 ORTHO05D005706 8.1e-18 95.1 65 55.4
BcaC05g25622 Brassica carinata HOM05D004918 ORTHO05D005706 2.9e-15 86.7 53 66.0
BcaC03g14995 Brassica carinata HOM05D004918 ORTHO05D005706 6.0e-13 79.0 64 53.1
FvH4_6g28300 Fragaria vesca HOM05D004918 ORTHO05D005706 6.7e-12 75.5 133 39.1
CAN.G1235.23 Capsicum annuum HOM05D004918 ORTHO05D005706 5.3e-09 65.9 31 77.4
CAN.G1986.5 Capsicum annuum HOM05D004918 ORTHO05D005706 5.3e-09 65.9 45 57.8
MELO3C000966.2 Cucumis melo HOM05D004918 ORTHO05D005706 5.3e-09 65.9 101 39.6
CSS0035645 Camellia sinensis var. sinensis HOM05D004918 ORTHO05D005706 1.2e-08 64.7 110 37.3
CAN.G829.5 Capsicum annuum HOM05D004534 ORTHO05D005706 4.5e-08 62.8 51 49.0
Cfa026120 Carpinus fangiana HOM05D004918 ORTHO05D125238 5.8e-08 62.4 148 30.4
CAN.G548.17 Capsicum annuum HOM05D002478 ORTHO05D005706 2.9e-07 60.1 41 63.4
MELO3C032630.2 Cucumis melo HOM05D004918 ORTHO05D005706 2.9e-07 60.1 60 50.0
Sed0005872 Sechium edule HOM05D004918 ORTHO05D005706 1.9e-06 57.4 101 36.6
MBI02_g02973_MAGBIO Magnolia biondii HOM05D000955 ORTHO05D003340 2.4e-06 57.0 26 80.8
CAN.G53.21 Capsicum annuum HOM05D002478 ORTHO05D020307 9.3e-06 55.1 68 41.2


User provided reference genes

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