Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_62.g23355 Utricularia gibba HOM05D005137 ORTHO05D006478 1.8e-119 432.6 218 100.0
unitig_52.g17664 Utricularia gibba HOM05D005137 ORTHO05D006478 1.3e-59 233.8 176 71.0
MSTRG.22441 Avicennia marina HOM05D005137 ORTHO05D006478 2.7e-54 216.1 183 63.4
SalBow6G2431 Salvia bowleyana HOM05D005137 ORTHO05D006478 1.3e-51 207.2 185 58.9
SalBow6G5561 Salvia bowleyana HOM05D005137 ORTHO05D006478 1.3e-51 207.2 185 58.9
Oeu021007.1 Olea europaea HOM05D005137 ORTHO05D006478 4.5e-49 198.7 167 61.7
SGA_v2.0_scaffold149G36609 Striga asiatica HOM05D005137 ORTHO05D006478 2.9e-48 196.1 176 59.7
Migut.N03340 Erythranthe guttata HOM05D005137 ORTHO05D006478 3.8e-48 195.7 173 58.4
arahy.Tifrunner.gnm1.ann1.RF3N8D Arachis hypogaea HOM05D005137 ORTHO05D006478 1.1e-47 194.1 185 54.1
Lj1g0006567 Lotus japonicus HOM05D005137 ORTHO05D006478 1.1e-47 194.1 168 58.9
Oeu039592.1 Olea europaea HOM05D005137 ORTHO05D006478 4.2e-47 192.2 167 59.9
Peaxi162Scf00020g02234 Petunia axillaris HOM05D005137 ORTHO05D006478 7.1e-47 191.4 167 59.3
Sp1g29570 Schrenkiella parvula HOM05D005137 ORTHO05D006478 1.2e-46 190.7 176 57.4
Sc01g0001710 Simmondsia chinensis HOM05D005137 ORTHO05D006478 1.2e-46 190.7 175 57.1
PGSC0003DMG400033629 Solanum tuberosum HOM05D005137 ORTHO05D006478 1.2e-46 190.7 167 59.3
BcaB07g33131 Brassica carinata HOM05D005137 ORTHO05D006478 1.6e-46 190.3 167 57.5
CAN.G623.4 Capsicum annuum HOM05D005137 ORTHO05D006478 1.6e-46 190.3 167 58.7
arahy.Tifrunner.gnm1.ann1.UQ6TGS Arachis hypogaea HOM05D005137 ORTHO05D006478 2.1e-46 189.9 167 58.1
Sopen08g021770 Solanum pennellii HOM05D005137 ORTHO05D006478 2.7e-46 189.5 167 58.7
BcaB03g13677 Brassica carinata HOM05D005137 ORTHO05D006478 3.5e-46 189.1 167 59.3
C06p11610 Brassica napus HOM05D005137 ORTHO05D006478 3.5e-46 189.1 167 58.1
A08p08280 Brassica napus HOM05D005137 ORTHO05D006478 4.6e-46 188.7 167 59.3
Solyc08g067830.3 Solanum lycopersicum HOM05D005137 ORTHO05D006478 4.6e-46 188.7 167 58.7
THA.LOC104806781 Tarenaya hassleriana HOM05D005137 ORTHO05D006478 6.0e-46 188.3 179 54.7
CANSAT25G3131 Cannabis sativa HOM05D005137 ORTHO05D006478 7.9e-46 188.0 167 56.9
Carub.0001s3248 Capsella rubella HOM05D005137 ORTHO05D006478 1.0e-45 187.6 167 58.7
Thhalv10008956m.g Eutrema salsugineum HOM05D005137 ORTHO05D006478 1.0e-45 187.6 176 56.2
BcaC08g43783 Brassica carinata HOM05D005137 ORTHO05D006478 1.8e-45 186.8 167 56.9
BolC6t36295H Brassica oleracea HOM05D005137 ORTHO05D006478 1.8e-45 186.8 167 56.9
Lalb_Chr03g0035851 Lupinus albus HOM05D005137 ORTHO05D006478 1.8e-45 186.8 168 57.1
Manes.02G220500 Manihot esculenta HOM05D005137 ORTHO05D006478 1.8e-45 186.8 167 58.1
THA.LOC104813096 Tarenaya hassleriana HOM05D005137 ORTHO05D006478 2.3e-45 186.4 167 56.9
Psat5g109360 Pisum sativum HOM05D005137 ORTHO05D006478 3.0e-45 186.0 166 56.6
BcaC05g27759 Brassica carinata HOM05D005137 ORTHO05D006478 8.7e-45 184.5 170 55.9
C05p37550 Brassica napus HOM05D005137 ORTHO05D006478 8.7e-45 184.5 170 55.9
Prupe.8G054100 Prunus persica HOM05D005137 ORTHO05D006478 1.1e-44 184.1 169 57.4
BraA08t32846Z Brassica rapa HOM05D005137 ORTHO05D006478 1.5e-44 183.7 193 52.3
FvH4_2g12231 Fragaria vesca HOM05D005137 ORTHO05D006478 1.5e-44 183.7 167 55.7
TWI34G1514 Tripterygium wilfordii HOM05D005137 ORTHO05D006478 1.5e-44 183.7 167 56.9
Atru.chr13.1812 Acer truncatum HOM05D005137 ORTHO05D006478 1.9e-44 183.3 167 58.1
CSS0049152 Camellia sinensis var. sinensis HOM05D005137 ORTHO05D006478 1.9e-44 183.3 167 56.3
CANSAT64G0780 Cannabis sativa HOM05D005137 ORTHO05D006478 1.9e-44 183.3 167 55.7
Dinv41687 Davidia involucrata HOM05D005137 ORTHO05D006478 3.3e-44 182.6 167 56.9
Glyma.09G166500 Glycine max HOM05D005137 ORTHO05D006478 4.3e-44 182.2 167 54.5
Sabra13G0097100 Salix brachista HOM05D005137 ORTHO05D006478 4.3e-44 182.2 166 54.8
Ca_16220_v3 Cicer arietinum L. HOM05D005137 ORTHO05D006478 5.7e-44 181.8 167 54.5
Duzib177G1119 Durio zibethinus HOM05D005137 ORTHO05D006478 5.7e-44 181.8 167 55.7
FAN20G1842 Fragaria x ananassa HOM05D005137 ORTHO05D006478 7.4e-44 181.4 167 55.1
VMungo0464G1968 Vigna mungo HOM05D005137 ORTHO05D006478 9.6e-44 181.0 167 53.3
Cc10_g11140 Coffea canephora HOM05D005137 ORTHO05D006478 1.6e-43 180.3 167 57.5
AL1G48900 Arabidopsis lyrata HOM05D005137 ORTHO05D006478 2.8e-43 179.5 176 54.0
CSS0031544 Camellia sinensis var. sinensis HOM05D005137 ORTHO05D006478 2.8e-43 179.5 167 55.7
CSS0044586 Camellia sinensis var. sinensis HOM05D005137 ORTHO05D006478 2.8e-43 179.5 167 55.7
Phvul.004G084500 Phaseolus vulgaris HOM05D005137 ORTHO05D006478 2.8e-43 179.5 167 53.3
Potri.013G114800 Populus trichocarpa HOM05D005137 ORTHO05D006478 2.8e-43 179.5 166 53.0
Glyma.16G156600 Glycine max HOM05D005137 ORTHO05D006478 3.7e-43 179.1 167 53.3
Lalb_Chr01g0009971 Lupinus albus HOM05D005137 ORTHO05D006478 3.7e-43 179.1 168 54.8
AT1G34350 Arabidopsis thaliana HOM05D005137 ORTHO05D006478 4.8e-43 178.7 176 53.4
Gohir.D05G253100 Gossypium hirsutum HOM05D005137 ORTHO05D006478 4.8e-43 178.7 175 53.7
BolC8t47866H Brassica oleracea HOM05D005137 ORTHO05D006478 6.3e-43 178.3 186 52.7
AUR62004663 Chenopodium quinoa HOM05D005137 ORTHO05D006478 6.3e-43 178.3 173 55.5
Glyma.02G074600 Glycine max HOM05D005137 ORTHO05D006478 6.3e-43 178.3 167 52.7
RcHm_v2.0_Chr6g0272201 Rosa chinensis HOM05D005137 ORTHO05D006478 6.3e-43 178.3 167 54.5
BolC5t32496H Brassica oleracea HOM05D005137 ORTHO05D006478 8.2e-43 177.9 191 50.8
Gohir.A05G250700 Gossypium hirsutum HOM05D005137 ORTHO05D006478 8.2e-43 177.9 175 53.7
MD10G1046500 Malus domestica HOM05D005137 ORTHO05D006478 8.2e-43 177.9 167 57.5
Medtr3g078663 Medicago truncatula HOM05D005137 ORTHO05D006478 8.2e-43 177.9 176 51.1
GSVIVG01023270001 Vitis vinifera HOM05D005137 ORTHO05D006478 8.2e-43 177.9 167 52.7
Aa31LG6G8420 Aethionema arabicum HOM05D005137 ORTHO05D006478 1.4e-42 177.2 174 54.0
FAN27G0578 Fragaria x ananassa HOM05D005137 ORTHO05D006478 1.4e-42 177.2 167 53.9
Nn5g27795 Nelumbo nucifera HOM05D005137 ORTHO05D006478 2.4e-42 176.4 167 52.7
Nitab4.5_0006579g0080 Nicotiana tabacum HOM05D005137 ORTHO05D006478 2.4e-42 176.4 167 55.7
PGR004G0411 Punica granatum HOM05D005137 ORTHO05D006478 2.4e-42 176.4 167 53.9
TAR628G0708 Trochodendron aralioides HOM05D005137 ORTHO05D006478 2.4e-42 176.4 176 51.1
AUR62023580 Chenopodium quinoa HOM05D005137 ORTHO05D006478 3.1e-42 176.0 175 55.4
Hund27077 Selenicereus undatus HOM05D005137 ORTHO05D006478 3.1e-42 176.0 165 52.7
Gorai.009G263900 Gossypium raimondii HOM05D005137 ORTHO05D006478 4.1e-42 175.6 175 53.1
MELO3C024753.2 Cucumis melo HOM05D005137 ORTHO05D006478 5.3e-42 175.3 167 51.5
CsaV3_2G035870 Cucumis sativus L. HOM05D005137 ORTHO05D006478 5.3e-42 175.3 167 51.5
Potri.019G085500 Populus trichocarpa HOM05D005137 ORTHO05D006478 5.3e-42 175.3 166 51.8
Thecc.08G201900 Theobroma cacao HOM05D005137 ORTHO05D006478 5.3e-42 175.3 175 52.6
Cpa.g.sc66.58 Carica papaya HOM05D005137 ORTHO05D006478 1.5e-41 173.7 167 55.1
Eucgr.F04136 Eucalyptus grandis HOM05D005137 ORTHO05D006478 1.5e-41 173.7 167 54.5
Sed0020054 Sechium edule HOM05D005137 ORTHO05D006478 1.5e-41 173.7 167 52.1
TWI32G0414 Tripterygium wilfordii HOM05D005137 ORTHO05D006478 2.0e-41 173.3 173 54.9
Aqoxy5G03157 Aquilegia oxysepala HOM05D005137 ORTHO05D006478 2.6e-41 172.9 165 52.1
Nitab4.5_0000125g0160 Nicotiana tabacum HOM05D005137 ORTHO05D006478 3.4e-41 172.6 167 55.7
Ciclev10002730m.g Citrus clementina HOM05D005137 ORTHO05D006478 4.5e-41 172.2 167 53.3
PSO210G7193 Papaver somniferum HOM05D005137 ORTHO05D006478 4.5e-41 172.2 167 50.9
CDE05G2425 Ceratophyllum demersum HOM05D005137 ORTHO05D006478 5.9e-41 171.8 167 50.9
EL10Ac1g00786 Beta vulgaris HOM05D005137 ORTHO05D006478 1.3e-40 170.6 167 51.5
ECA248G1561 Erigeron canadensis HOM05D005137 ORTHO05D006478 1.3e-40 170.6 167 51.5
Lsat_1_v5_gn_1_53501 Lactuca sativa HOM05D005137 ORTHO05D006478 2.2e-40 169.9 171 51.5
MD05G1040400 Malus domestica HOM05D005137 ORTHO05D006478 2.2e-40 169.9 167 55.1
DCAR_006419 Daucus carota HOM05D005137 ORTHO05D006478 3.8e-40 169.1 170 52.4
PSO238G0018 Papaver somniferum HOM05D005137 ORTHO05D006478 5.0e-40 168.7 167 50.3
Hund16805 Selenicereus undatus HOM05D005137 ORTHO05D006478 5.0e-40 168.7 176 49.4
CiPaw.15G082700 Carya illinoinensis HOM05D005137 ORTHO05D006478 6.5e-40 168.3 167 52.7
Haze_17904 Corylus avellana HOM05D005137 ORTHO05D006478 6.5e-40 168.3 193 47.7
Duzib116G0364 Durio zibethinus HOM05D005137 ORTHO05D006478 8.5e-40 167.9 175 49.7
HanXRQChr01g0027021 Helianthus annuus HOM05D005137 ORTHO05D006478 8.5e-40 167.9 167 50.9
ClCG02G007860 Citrullus lanatus HOM05D005137 ORTHO05D006478 3.2e-39 166.0 159 52.8
COL.COLO4_35446 Corchorus olitorius HOM05D005137 ORTHO05D006478 4.2e-39 165.6 221 43.0
Cfa018205 Carpinus fangiana HOM05D005137 ORTHO05D006478 7.2e-39 164.9 167 50.9
PSO063G4111 Papaver somniferum HOM05D005137 ORTHO05D006478 9.3e-39 164.5 174 49.4
Zm00001eb174480 Zea mays HOM05D005137 ORTHO05D006478 4.6e-38 162.2 180 47.2
Medtr1g083990 Medicago truncatula HOM05D001444 ORTHO05D006478 1.9e-36 156.8 177 49.2
ATR0584G018 Amborella trichopoda HOM05D005137 ORTHO05D006478 5.7e-36 155.2 168 50.0
Os08g0104100 Oryza sativa ssp. japonica HOM05D005137 ORTHO05D006478 2.2e-35 153.3 171 44.4
HPP92_025038 Vanilla planifolia HOM05D005137 ORTHO05D006478 1.1e-34 151.0 175 45.7
Peaxi162Scf00105g01425 Petunia axillaris HOM05D005137 ORTHO05D006478 1.6e-30 137.1 90 75.6
CARHR033800 Cardamine hirsuta HOM05D005137 ORTHO05D006478 2.1e-30 136.7 145 51.0
QL02p034100 Quercus lobata HOM05D005137 ORTHO05D006478 2.1e-30 136.7 80 81.2
FAN24G3447 Fragaria x ananassa HOM05D004393 ORTHO05D004897 4.6e-30 135.6 135 51.1
Os05g0432500 Oryza sativa ssp. japonica HOM05D005137 ORTHO05D006478 5.1e-29 132.1 168 45.2
Lj7P297T42 Lonicera japonica HOM05D005137 ORTHO05D006478 6.7e-29 131.7 82 78.0
Rhsim06G0097400 Rhododendron simsii HOM05D005137 ORTHO05D006478 4.4e-28 129.0 82 75.6
CAN.G21.12 Capsicum annuum HOM05D005137 ORTHO05D006478 5.7e-28 128.6 79 77.2
SEGI_32859 Sequoiadendron giganteum HOM05D005137 ORTHO05D006478 2.8e-27 126.3 175 45.1
SEGI_32911 Sequoiadendron giganteum HOM05D005137 ORTHO05D006478 2.8e-27 126.3 175 45.1
Glyma.16G216600 Glycine max HOM05D005137 ORTHO05D006478 9.1e-26 121.3 80 70.0
Pp3c12_6500 Physcomitrium patens HOM05D005137 ORTHO05D006478 1.0e-24 117.9 172 40.7
AagrBONN_evm.TU.Sc2ySwM_117.1441 Anthoceros agrestis HOM05D005137 ORTHO05D006478 2.2e-24 116.7 174 42.0
SGA_v2.0_scaffold386G50489 Striga asiatica HOM05D005137 ORTHO05D006478 8.5e-24 114.8 97 63.9
arahy.Tifrunner.gnm1.ann1.T3MISZ Arachis hypogaea HOM05D005137 ORTHO05D006478 4.2e-23 112.5 65 76.9
Mapoly0118s0004 Marchantia polymorpha HOM05D005137 ORTHO05D006478 2.1e-22 110.2 176 42.0
SMO115G0137 Selaginella moellendorffii HOM05D005137 ORTHO05D006478 6.3e-19 98.6 74 60.8
SMO304G0014 Selaginella moellendorffii HOM05D005137 ORTHO05D006478 2.4e-18 96.7 83 57.8
Actinidia32879 Actinidia chinensis HOM05D005137 ORTHO05D006478 7.7e-17 91.7 57 78.9
Cre02.g142150 Chlamydomonas reinhardtii HOM05D005137 ORTHO05D006478 9.4e-15 84.7 155 34.8
arahy.Tifrunner.gnm1.ann1.T6GVNL Arachis hypogaea HOM05D005137 ORTHO05D006478 2.7e-14 83.2 59 66.1
arahy.Tifrunner.gnm1.ann1.84LCSI Arachis hypogaea HOM05D005137 ORTHO05D013367 1.0e-13 81.3 46 76.1
BraA09t38756Z Brassica rapa HOM05D005137 ORTHO05D006478 4.0e-13 79.3 101 43.6
Lj7C297T10 Lonicera japonica HOM05D005137 ORTHO05D006478 5.2e-13 79.0 47 70.2
SGA_v2.0_scaffold1053G53813 Striga asiatica HOM05D005137 ORTHO05D006478 4.8e-11 72.4 76 55.3
arahy.Tifrunner.gnm1.ann1.A3G9LL Arachis hypogaea HOM05D005137 ORTHO05D006478 6.3e-11 72.0 48 70.8
Dinv30978 Davidia involucrata HOM05D005137 ORTHO05D006478 8.2e-11 71.6 47 63.8
vmacro12499 Vaccinium macrocarpon HOM05D005137 ORTHO05D006478 1.4e-10 70.9 49 57.1
Medtr2g069440 Medicago truncatula HOM05D003000 ORTHO05D003699 4.1e-10 69.3 51 64.7
MCO05G717 Micromonas commoda HOM05D005137 ORTHO05D006478 4.1e-10 69.3 131 36.6
QL02p034107 Quercus lobata HOM05D005137 ORTHO05D006478 4.1e-10 69.3 53 52.8
TPR.G27590 Trifolium pratense HOM05D005137 ORTHO05D006478 7.7e-09 65.1 47 53.2


User provided reference genes

Program Settings