Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_62.g23270 Utricularia gibba HOM05D006520 ORTHO05D008405 6.4e-126 454.1 238 100.0
Migut.M01795 Erythranthe guttata HOM05D006520 ORTHO05D008405 1.9e-69 266.5 182 76.9
SGA_v2.0_scaffold258G45796 Striga asiatica HOM05D006520 ORTHO05D008405 1.0e-67 260.8 182 76.4
Dinv22290 Davidia involucrata HOM05D006520 ORTHO05D008405 1.8e-67 260.0 194 72.2
SalBow6G5624 Salvia bowleyana HOM05D006520 ORTHO05D008405 1.2e-66 257.3 181 77.3
TWI38G0825 Tripterygium wilfordii HOM05D006520 ORTHO05D008405 1.2e-66 257.3 193 69.4
Oeu021407.1 Olea europaea HOM05D006520 ORTHO05D008405 1.3e-65 253.8 182 73.1
Cfa020400 Carpinus fangiana HOM05D006520 ORTHO05D008405 2.8e-65 252.7 192 68.2
Cc05_g13380 Coffea canephora HOM05D006520 ORTHO05D008405 4.9e-65 251.9 182 69.8
QL08p012619 Quercus lobata HOM05D006520 ORTHO05D008405 4.9e-65 251.9 193 68.9
TAR362G1255 Trochodendron aralioides HOM05D006520 ORTHO05D008405 4.9e-65 251.9 193 68.4
CSS0025953 Camellia sinensis var. sinensis HOM05D006520 ORTHO05D008405 6.3e-65 251.5 193 68.4
Nn3g21422 Nelumbo nucifera HOM05D006520 ORTHO05D008405 8.3e-65 251.1 193 66.8
vmacro11755 Vaccinium macrocarpon HOM05D006520 ORTHO05D008405 8.3e-65 251.1 182 72.0
Haze_09634 Corylus avellana HOM05D006520 ORTHO05D008405 1.8e-64 250.0 192 67.2
GSVIVG01001984001 Vitis vinifera HOM05D006520 ORTHO05D008405 1.8e-64 250.0 205 67.3
Cpa.g.sc1133.1 Carica papaya HOM05D006520 ORTHO05D008405 2.4e-64 249.6 193 68.4
Lj8A167T45 Lonicera japonica HOM05D006520 ORTHO05D008405 5.4e-64 248.4 193 67.9
Ciclev10008777m.g Citrus clementina HOM05D006520 ORTHO05D008405 9.2e-64 247.7 193 66.3
CAN.G315.8 Capsicum annuum HOM05D006520 ORTHO05D008405 1.6e-63 246.9 182 69.8
Sopen12g001190 Solanum pennellii HOM05D006520 ORTHO05D008405 1.6e-63 246.9 182 69.8
PGSC0003DMG400001100 Solanum tuberosum HOM05D006520 ORTHO05D008405 1.6e-63 246.9 182 70.3
HanXRQChr08g0234071 Helianthus annuus HOM05D006520 ORTHO05D008405 2.0e-63 246.5 183 71.0
Nitab4.5_0004600g0010 Nicotiana tabacum HOM05D006520 ORTHO05D008405 2.0e-63 246.5 182 70.3
Nitab4.5_0000653g0110 Nicotiana tabacum HOM05D006520 ORTHO05D008405 3.5e-63 245.7 182 70.3
Solyc12g005200.3 Solanum lycopersicum HOM05D006520 ORTHO05D008405 3.5e-63 245.7 182 69.8
Sc16g0006360 Simmondsia chinensis HOM05D006520 ORTHO05D008405 7.8e-63 244.6 182 71.4
CiPaw.11G185500 Carya illinoinensis HOM05D006520 ORTHO05D008405 1.0e-62 244.2 181 69.6
Eucgr.F00972 Eucalyptus grandis HOM05D006520 ORTHO05D008405 1.3e-62 243.8 192 65.1
DCAR_010030 Daucus carota HOM05D006520 ORTHO05D008405 1.7e-62 243.4 209 63.2
Peaxi162Scf01097g00110 Petunia axillaris HOM05D006520 ORTHO05D008405 1.7e-62 243.4 182 68.7
Atru.chr2.3238 Acer truncatum HOM05D006520 ORTHO05D008405 2.9e-62 242.7 192 66.7
Duzib213G0852 Durio zibethinus HOM05D006520 ORTHO05D008405 3.8e-62 242.3 192 64.6
THA.LOC104817880 Tarenaya hassleriana HOM05D006520 ORTHO05D008405 1.5e-61 240.4 216 59.7
MD03G1209400 Malus domestica HOM05D006520 ORTHO05D008405 2.5e-61 239.6 193 63.7
Hund18268 Selenicereus undatus HOM05D006520 ORTHO05D008405 2.5e-61 239.6 193 66.8
Ah.06g182970 Amaranthus hybridus HOM05D006520 ORTHO05D008405 4.3e-61 238.8 193 65.3
Aqoxy5G00708 Aquilegia oxysepala HOM05D006520 ORTHO05D008405 7.3e-61 238.0 193 66.3
PGR083G2407 Punica granatum HOM05D006520 ORTHO05D008405 1.6e-60 236.9 193 63.7
FAN16G1768 Fragaria x ananassa HOM05D006520 ORTHO05D008405 2.1e-60 236.5 193 63.7
Sed0027741 Sechium edule HOM05D006520 ORTHO05D008405 2.8e-60 236.1 192 64.1
Thecc.07G046500 Theobroma cacao HOM05D006520 ORTHO05D008405 2.8e-60 236.1 200 62.5
FvH4_3g22000 Fragaria vesca HOM05D006520 ORTHO05D008405 3.6e-60 235.7 193 63.2
COL.COLO4_09604 Corchorus olitorius HOM05D006520 ORTHO05D008405 6.1e-60 235.0 200 62.0
MELO3C018098.2 Cucumis melo HOM05D006520 ORTHO05D008405 6.1e-60 235.0 193 64.8
ClCG05G014620 Citrullus lanatus HOM05D006520 ORTHO05D008405 8.0e-60 234.6 192 64.1
ECA246G0715 Erigeron canadensis HOM05D006520 ORTHO05D008405 8.0e-60 234.6 183 68.3
RcHm_v2.0_Chr5g0037851 Rosa chinensis HOM05D006520 ORTHO05D008405 8.0e-60 234.6 193 63.2
Gohir.A01G076200 Gossypium hirsutum HOM05D006520 ORTHO05D008405 1.0e-59 234.2 192 63.0
Gorai.002G084200 Gossypium raimondii HOM05D006520 ORTHO05D008405 1.0e-59 234.2 192 63.0
Sabra11G0121700 Salix brachista HOM05D006520 ORTHO05D008405 1.0e-59 234.2 182 67.0
FAN21G1190 Fragaria x ananassa HOM05D006520 ORTHO05D008405 1.8e-59 233.4 193 62.7
CsaV3_3G023150 Cucumis sativus L. HOM05D006520 ORTHO05D008405 4.0e-59 232.3 193 63.7
Thhalv10011599m.g Eutrema salsugineum HOM05D006520 ORTHO05D008405 6.8e-59 231.5 208 59.1
Sabra11G0121400 Salix brachista HOM05D006520 ORTHO05D008405 8.9e-59 231.1 197 61.9
Gohir.D01G063700 Gossypium hirsutum HOM05D006520 ORTHO05D008405 1.5e-58 230.3 192 62.0
AL1G58660 Arabidopsis lyrata HOM05D006520 ORTHO05D008405 2.0e-58 229.9 198 60.6
CANSAT35G1182 Cannabis sativa HOM05D006520 ORTHO05D008405 2.0e-58 229.9 193 63.7
Potri.011G135600 Populus trichocarpa HOM05D006520 ORTHO05D008405 2.6e-58 229.6 208 58.7
Carub.0001s3988 Capsella rubella HOM05D006520 ORTHO05D008405 4.4e-58 228.8 198 61.1
Lsat_1_v5_gn_7_65980 Lactuca sativa HOM05D006520 ORTHO05D008405 5.8e-58 228.4 163 71.8
AUR62043225 Chenopodium quinoa HOM05D006520 ORTHO05D008405 1.3e-57 227.3 194 62.4
ATR0706G183 Amborella trichopoda HOM05D006520 ORTHO05D008405 1.7e-57 226.9 193 61.1
Aa31LG10G3340 Aethionema arabicum HOM05D006520 ORTHO05D008405 2.2e-57 226.5 198 59.1
CARHR040980 Cardamine hirsuta HOM05D006520 ORTHO05D008405 2.2e-57 226.5 193 61.1
PSO210G5695 Papaver somniferum HOM05D006520 ORTHO05D008405 2.2e-57 226.5 196 62.8
PSO832G0135 Papaver somniferum HOM05D006520 ORTHO05D008405 2.2e-57 226.5 196 63.3
AT1G50940 Arabidopsis thaliana HOM05D006520 ORTHO05D008405 3.7e-57 225.7 210 58.1
A08p03100 Brassica napus HOM05D006520 ORTHO05D008405 3.2e-56 222.6 198 59.1
Lj3g0004956 Lotus japonicus HOM05D006520 ORTHO05D008405 4.1e-56 222.2 182 64.8
AUR62020529 Chenopodium quinoa HOM05D006520 ORTHO05D008405 5.4e-56 221.9 194 61.3
CsaV3_3G025190 Cucumis sativus L. HOM05D006520 ORTHO05D008405 9.2e-56 221.1 207 58.9
BcaC01g01246 Brassica carinata HOM05D006520 ORTHO05D008405 1.2e-55 220.7 198 58.6
BolC3t21294H Brassica oleracea HOM05D006520 ORTHO05D008405 1.2e-55 220.7 198 58.6
BraA08t32341Z Brassica rapa HOM05D006520 ORTHO05D008405 1.2e-55 220.7 198 58.6
CiPaw.11G185700 Carya illinoinensis HOM05D006520 ORTHO05D008405 1.2e-55 220.7 200 60.5
Glyma.06G270300 Glycine max HOM05D006520 ORTHO05D008405 1.6e-55 220.3 182 64.8
arahy.Tifrunner.gnm1.ann1.45MNV2 Arachis hypogaea HOM05D006520 ORTHO05D008405 2.0e-55 219.9 194 62.4
C03p89710 Brassica napus HOM05D006520 ORTHO05D008405 4.6e-55 218.8 198 58.1
Psat7g163040 Pisum sativum HOM05D006520 ORTHO05D008405 1.3e-54 217.2 182 64.3
Sp1g37680 Schrenkiella parvula HOM05D006520 ORTHO05D008405 1.3e-54 217.2 187 62.0
BcaB04g17242 Brassica carinata HOM05D006520 ORTHO05D008405 2.3e-54 216.5 199 58.3
Prupe.4G205700 Prunus persica HOM05D006520 ORTHO05D008405 3.9e-54 215.7 198 57.1
Lalb_Chr03g0030081 Lupinus albus HOM05D006520 ORTHO05D008405 6.6e-54 214.9 181 63.5
Medtr4g080790 Medicago truncatula HOM05D006520 ORTHO05D008405 1.1e-53 214.2 194 61.3
Ca_18859_v3 Cicer arietinum L. HOM05D006520 ORTHO05D008405 5.6e-53 211.8 184 64.1
Phvul.011G139475 Phaseolus vulgaris HOM05D006520 ORTHO05D008405 1.6e-52 210.3 182 63.7
VMungo1127G1053 Vigna mungo HOM05D006520 ORTHO05D008405 6.2e-52 208.4 195 60.5
Os03g0835400 Oryza sativa ssp. japonica HOM05D006520 ORTHO05D008405 3.1e-51 206.1 183 61.2
Zm00001eb063680 Zea mays HOM05D006520 ORTHO05D008405 3.4e-50 202.6 195 56.4
HPP92_026253 Vanilla planifolia HOM05D006520 ORTHO05D008405 2.9e-49 199.5 208 56.2
EL10Ac4g07934 Beta vulgaris HOM05D006520 ORTHO05D008405 5.1e-46 188.7 193 55.4
TPR.G25908 Trifolium pratense HOM05D006520 ORTHO05D008405 1.9e-45 186.8 150 66.0
AagrBONN_evm.TU.Sc2ySwM_228.3593 Anthoceros agrestis HOM05D006520 ORTHO05D008405 4.3e-45 185.7 160 59.4
Pp3c15_18640 Physcomitrium patens HOM05D006520 ORTHO05D008405 2.3e-43 179.9 181 51.9
Glyma.12G134400 Glycine max HOM05D006520 ORTHO05D008405 1.5e-42 177.2 181 58.6
SHI31861 Sapria himalayana HOM05D006520 ORTHO05D008405 6.4e-41 171.8 182 53.8
Mapoly0055s0094 Marchantia polymorpha HOM05D006520 ORTHO05D008405 1.1e-40 171.0 166 54.8
Manes.15G075200 Manihot esculenta HOM05D006520 ORTHO05D008405 5.4e-40 168.7 132 66.7
Actinidia09928 Actinidia chinensis HOM05D006520 ORTHO05D008405 1.6e-39 167.2 121 71.1
SEGI_24363 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 6.0e-39 165.2 135 65.2
SMO169G0265 Selaginella moellendorffii HOM05D006520 ORTHO05D008405 1.6e-36 157.1 172 53.5
CsaV3_UNG094720 Cucumis sativus L. HOM05D006520 ORTHO05D008405 6.8e-35 151.8 114 69.3
TAR362G0323 Trochodendron aralioides HOM05D000062 ORTHO05D000043 1.7e-30 137.1 96 69.8
Cre16.g687950 Chlamydomonas reinhardtii HOM05D006520 ORTHO05D008405 1.9e-24 117.1 170 42.9
CDE01G0592 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 6.0e-23 112.1 84 69.0
Actinidia27215 Actinidia chinensis HOM05D006520 ORTHO05D008405 1.9e-21 107.1 113 60.2
Haze_27296 Corylus avellana HOM05D006520 ORTHO05D008405 2.8e-20 103.2 193 35.2
Haze_27029 Corylus avellana HOM05D006520 ORTHO05D008405 3.6e-20 102.8 182 37.9
Cfa027367 Carpinus fangiana HOM05D006520 ORTHO05D008405 3.9e-14 82.8 198 30.3
PRCOL_00001901 Prasinoderma coloniale HOM05D006520 ORTHO05D008405 1.3e-12 77.8 162 37.0
arahy.Tifrunner.gnm1.ann1.3QT6IB Arachis hypogaea HOM05D006520 ORTHO05D008405 4.2e-08 62.8 62 62.9


User provided reference genes

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