Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_62.g23255 Utricularia gibba HOM05D007442 ORTHO05D009284 6.4e-64 247.3 127 100.0
TWI18G1416 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 4.9e-32 141.4 85 83.5
SGA_v2.0_scaffold49G18406 Striga asiatica HOM05D007442 ORTHO05D009284 8.4e-32 140.6 87 83.9
Sabra14G0127300 Salix brachista HOM05D007442 ORTHO05D009284 1.4e-31 139.8 125 63.2
Gohir.A07G191900 Gossypium hirsutum HOM05D007442 ORTHO05D009284 5.5e-31 137.9 110 66.4
TWI36G1704 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 7.1e-31 137.5 84 81.0
Potri.014G167300 Populus trichocarpa HOM05D007442 ORTHO05D009284 9.3e-31 137.1 111 66.7
Gohir.D07G198200 Gossypium hirsutum HOM05D007442 ORTHO05D009284 1.2e-30 136.7 110 67.3
Gorai.001G221800 Gossypium raimondii HOM05D007442 ORTHO05D009284 1.2e-30 136.7 110 67.3
MSTRG.12248 Avicennia marina HOM05D007442 ORTHO05D009284 1.0e-29 133.7 87 79.3
Manes.12G065601 Manihot esculenta HOM05D007442 ORTHO05D009284 1.0e-29 133.7 85 83.5
ClCG02G009230 Citrullus lanatus HOM05D007442 ORTHO05D009284 1.8e-29 132.9 106 70.8
Sed0010901 Sechium edule HOM05D007442 ORTHO05D009284 1.8e-29 132.9 97 70.1
Thecc.01G195900 Theobroma cacao HOM05D007442 ORTHO05D009284 1.8e-29 132.9 124 61.3
GSVIVG01030083001 Vitis vinifera HOM05D007442 ORTHO05D009284 1.8e-29 132.9 124 62.1
BcaB06g26827 Brassica carinata HOM05D007442 ORTHO05D009284 2.3e-29 132.5 90 75.6
Carub.0003s2673 Capsella rubella HOM05D007442 ORTHO05D009284 2.3e-29 132.5 93 71.0
PGR083G2291 Punica granatum HOM05D007442 ORTHO05D009284 2.3e-29 132.5 92 73.9
Sed0005163 Sechium edule HOM05D007442 ORTHO05D009284 2.3e-29 132.5 106 68.9
Eucgr.H00878 Eucalyptus grandis HOM05D007442 ORTHO05D009284 3.0e-29 132.1 110 65.5
Sc06g0009910 Simmondsia chinensis HOM05D007442 ORTHO05D009284 3.0e-29 132.1 124 60.5
CsaV3_6G009590 Cucumis sativus L. HOM05D007442 ORTHO05D009284 3.9e-29 131.7 107 70.1
Oeu064352.1 Olea europaea HOM05D007442 ORTHO05D009284 3.9e-29 131.7 87 79.3
Thhalv10002726m.g Eutrema salsugineum HOM05D007442 ORTHO05D009284 5.1e-29 131.3 86 73.3
BcaC06g35915 Brassica carinata HOM05D007442 ORTHO05D009284 6.7e-29 131.0 92 70.7
BolC7t41415H Brassica oleracea HOM05D007442 ORTHO05D009284 6.7e-29 131.0 92 70.7
C05p43360 Brassica napus HOM05D007442 ORTHO05D009284 8.7e-29 130.6 92 70.7
BraA07t28440Z Brassica rapa HOM05D007442 ORTHO05D009284 8.7e-29 130.6 92 70.7
Nn1g07499 Nelumbo nucifera HOM05D007442 ORTHO05D009284 8.7e-29 130.6 75 88.0
THA.LOC104826628 Tarenaya hassleriana HOM05D007442 ORTHO05D009284 8.7e-29 130.6 120 63.3
Duzib138G0628 Durio zibethinus HOM05D007442 ORTHO05D009284 1.1e-28 130.2 110 60.9
MD17G1116900 Malus domestica HOM05D007442 ORTHO05D009284 1.1e-28 130.2 120 59.2
Actinidia35204 Actinidia chinensis HOM05D007442 ORTHO05D009284 1.5e-28 129.8 85 77.6
Os03g0595300 Oryza sativa ssp. japonica HOM05D007442 ORTHO05D009284 1.5e-28 129.8 88 78.4
Cc00_g11580 Coffea canephora HOM05D007442 ORTHO05D009284 1.9e-28 129.4 82 80.5
Dinv21296 Davidia involucrata HOM05D007442 ORTHO05D009284 1.9e-28 129.4 124 62.1
Glyma.02G308900 Glycine max HOM05D007442 ORTHO05D009284 1.9e-28 129.4 75 88.0
Sp3g23760 Schrenkiella parvula HOM05D007442 ORTHO05D009284 1.9e-28 129.4 84 76.2
Solyc05g024430.3 Solanum lycopersicum HOM05D007442 ORTHO05D009284 1.9e-28 129.4 87 72.4
CSS0032520 Camellia sinensis var. sinensis HOM05D007442 ORTHO05D009284 2.5e-28 129.0 94 72.3
Dinv26606 Davidia involucrata HOM05D007442 ORTHO05D009284 2.5e-28 129.0 123 60.2
Lsat_1_v5_gn_7_96821 Lactuca sativa HOM05D007442 ORTHO05D009284 2.5e-28 129.0 129 58.1
Cfa014227 Carpinus fangiana HOM05D007442 ORTHO05D009284 4.3e-28 128.3 109 62.4
LjContig00081g0000923 Lotus japonicus HOM05D007442 ORTHO05D009284 4.3e-28 128.3 115 62.6
VMungo0647G0872 Vigna mungo HOM05D007442 ORTHO05D009284 4.3e-28 128.3 75 85.3
Zm00001eb049770 Zea mays HOM05D007442 ORTHO05D009284 4.3e-28 128.3 127 59.8
QL04p068504 Quercus lobata HOM05D007442 ORTHO05D009284 5.6e-28 127.9 122 59.0
PGSC0003DMG400018833 Solanum tuberosum HOM05D007442 ORTHO05D009284 5.6e-28 127.9 85 76.5
AL3G42820 Arabidopsis lyrata HOM05D007442 ORTHO05D009284 7.4e-28 127.5 84 75.0
Phvul.008G289000 Phaseolus vulgaris HOM05D007442 ORTHO05D009284 7.4e-28 127.5 75 86.7
C07p09770 Brassica napus HOM05D007442 ORTHO05D009284 9.6e-28 127.1 92 69.6
Nitab4.5_0002154g0020 Nicotiana tabacum HOM05D007442 ORTHO05D009284 9.6e-28 127.1 127 57.5
CiPaw.03G281600 Carya illinoinensis HOM05D007442 ORTHO05D009284 1.3e-27 126.7 84 76.2
ECA236G2600 Erigeron canadensis HOM05D007442 ORTHO05D009284 1.3e-27 126.7 107 65.4
Nitab4.5_0000006g0670 Nicotiana tabacum HOM05D007442 ORTHO05D009284 1.3e-27 126.7 131 58.0
CANSAT80G0988 Cannabis sativa HOM05D007442 ORTHO05D009284 1.6e-27 126.3 114 60.5
FAN05G2406 Fragaria x ananassa HOM05D007442 ORTHO05D009284 1.6e-27 126.3 129 62.0
RcHm_v2.0_Chr2g0156001 Rosa chinensis HOM05D007442 ORTHO05D009284 1.6e-27 126.3 107 63.6
Sopen05g019430 Solanum pennellii HOM05D007442 ORTHO05D009284 2.1e-27 125.9 85 72.9
Peaxi162Scf00147g01918 Petunia axillaris HOM05D007442 ORTHO05D009284 3.7e-27 125.2 127 56.7
Prupe.3G197600 Prunus persica HOM05D007442 ORTHO05D009284 3.7e-27 125.2 129 59.7
Ciclev10017197m.g Citrus clementina HOM05D007442 ORTHO05D009284 4.8e-27 124.8 95 66.3
Duzib211G0040 Durio zibethinus HOM05D007442 ORTHO05D009284 4.8e-27 124.8 85 75.3
arahy.Tifrunner.gnm1.ann1.8YE7LP Arachis hypogaea HOM05D007442 ORTHO05D009284 6.2e-27 124.4 132 59.1
Migut.H01284 Erythranthe guttata HOM05D007442 ORTHO05D009284 6.2e-27 124.4 129 55.8
Lj8A135T99 Lonicera japonica HOM05D007442 ORTHO05D009284 6.2e-27 124.4 125 58.4
arahy.Tifrunner.gnm1.ann1.C8HW3T Arachis hypogaea HOM05D007442 ORTHO05D009284 8.2e-27 124.0 126 58.7
FvH4_6g40630 Fragaria vesca HOM05D007442 ORTHO05D009284 8.2e-27 124.0 129 60.5
FAN02G0623 Fragaria x ananassa HOM05D007442 ORTHO05D009284 8.2e-27 124.0 129 60.5
FAN09G1668 Fragaria x ananassa HOM05D007442 ORTHO05D009284 8.2e-27 124.0 129 60.5
FAN14G4407 Fragaria x ananassa HOM05D007442 ORTHO05D009284 8.2e-27 124.0 129 60.5
EL10Ac9g22680 Beta vulgaris HOM05D007442 ORTHO05D009284 1.4e-26 123.2 103 61.2
MD09G1126600 Malus domestica HOM05D007442 ORTHO05D009284 1.8e-26 122.9 75 81.3
Psat2g002440 Pisum sativum HOM05D007442 ORTHO05D009284 1.8e-26 122.9 62 90.3
AT4G13500 Arabidopsis thaliana HOM05D007442 ORTHO05D009284 2.4e-26 122.5 126 57.1
TAR629G1602 Trochodendron aralioides HOM05D007442 ORTHO05D009284 3.1e-26 122.1 72 81.9
Haze_12630 Corylus avellana HOM05D007442 ORTHO05D009284 4.0e-26 121.7 118 59.3
HanXRQChr11g0329011 Helianthus annuus HOM05D007442 ORTHO05D009284 4.0e-26 121.7 125 53.6
TPR.G35906 Trifolium pratense HOM05D007442 ORTHO05D009284 4.0e-26 121.7 127 58.3
Atru.BG.34.p Acer truncatum HOM05D007442 ORTHO05D009284 6.9e-26 120.9 72 83.3
PSO302G0215 Papaver somniferum HOM05D007442 ORTHO05D009284 6.9e-26 120.9 86 72.1
DCAR_021093 Daucus carota HOM05D007442 ORTHO05D009284 1.2e-25 120.2 75 74.7
PSO210G6456 Papaver somniferum HOM05D007442 ORTHO05D009284 1.2e-25 120.2 86 70.9
Medtr5g098530 Medicago truncatula HOM05D007442 ORTHO05D009284 5.8e-25 117.9 75 77.3
Lalb_Chr04g0247091 Lupinus albus HOM05D007442 ORTHO05D009284 1.0e-24 117.1 109 59.6
Aa31LG5G16680 Aethionema arabicum HOM05D001040 ORTHO05D002795 1.3e-24 116.7 75 76.0
CDE04G1945 Ceratophyllum demersum HOM05D007442 ORTHO05D009284 3.2e-23 112.1 84 69.0
Glyma.14G004000 Glycine max HOM05D007442 ORTHO05D009284 5.5e-23 111.3 52 100.0
SMO364G0127 Selaginella moellendorffii HOM05D007442 ORTHO05D009284 5.5e-23 111.3 73 72.6
SEGI_21691 Sequoiadendron giganteum HOM05D007442 ORTHO05D009284 1.2e-22 110.2 125 52.8
vmacro09481 Vaccinium macrocarpon HOM05D007442 ORTHO05D009284 1.0e-21 107.1 129 48.8
Mapoly0072s0101 Marchantia polymorpha HOM05D007442 ORTHO05D009284 6.7e-21 104.4 77 63.6
MBI16_g07768_MAGBIO Magnolia biondii HOM05D007442 ORTHO05D009284 1.9e-20 102.8 48 97.9
CARHR103090 Cardamine hirsuta HOM05D007442 ORTHO05D009284 4.3e-20 101.7 49 93.9
Pp3c21_15030 Physcomitrium patens HOM05D007442 ORTHO05D009284 1.4e-15 86.7 57 64.9
AagrBONN_evm.TU.Sc2ySwM_368.44 Anthoceros agrestis HOM05D007442 ORTHO05D009284 2.7e-14 82.4 52 67.3
Rhsim04G0028000 Rhododendron simsii HOM05D000264 ORTHO05D009284 7.9e-14 80.9 61 63.9
Cre03.g151200 Chlamydomonas reinhardtii HOM05D007442 ORTHO05D009284 7.7e-09 64.3 85 44.7


User provided reference genes

Program Settings