Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_62.g23059 Utricularia gibba HOM05D000034 ORTHO05D011401 3.2e-37 157.9 79 100.0
unitig_22.g6092 Utricularia gibba HOM05D009707 ORTHO05D011401 4.4e-23 110.9 66 78.8
SGA_v2.0_scaffold235G43663 Striga asiatica HOM05D009666 ORTHO05D000277 7.9e-12 73.6 77 41.6
SGA_v2.0_scaffold13G06465 Striga asiatica HOM05D000034 ORTHO05D000277 5.6e-10 67.4 65 46.2
SGA_v2.0_scaffold27G11629 Striga asiatica HOM05D009707 ORTHO05D010215 7.4e-10 67.0 65 40.0
SGA_v2.0_scaffold3G01632 Striga asiatica HOM05D009666 ORTHO05D000277 1.3e-09 66.2 77 39.0
SGA_v2.0_scaffold53G19369 Striga asiatica HOM05D000034 ORTHO05D000277 1.3e-09 66.2 77 39.0
DCAR_023746 Daucus carota HOM05D000034 ORTHO05D000277 6.2e-09 63.9 71 43.7
Migut.F01547 Erythranthe guttata HOM05D000034 ORTHO05D000277 6.2e-09 63.9 65 43.1
DCAR_003199 Daucus carota HOM05D000034 ORTHO05D000277 8.1e-09 63.5 69 44.9
SGA_v2.0_scaffold103G30052 Striga asiatica HOM05D000034 ORTHO05D000277 1.1e-08 63.2 77 37.7
DCAR_008359 Daucus carota HOM05D000034 ORTHO05D000277 1.4e-08 62.8 71 42.3
Os04g0590366 Oryza sativa ssp. japonica HOM05D000034 ORTHO05D000277 1.4e-08 62.8 68 41.2
SGA_v2.0_scaffold88G27335 Striga asiatica HOM05D009707 ORTHO05D000277 1.4e-08 62.8 82 40.2
SGA_v2.0_scaffold102G29874 Striga asiatica HOM05D009707 ORTHO05D000277 1.8e-08 62.4 82 40.2
SGA_v2.0_scaffold105G30384 Striga asiatica HOM05D000034 ORTHO05D000277 2.4e-08 62.0 59 44.1
EL10Ac9g21126 Beta vulgaris HOM05D000034 ORTHO05D000037 3.1e-08 61.6 71 42.3
AUR62043288 Chenopodium quinoa HOM05D000034 ORTHO05D000277 3.1e-08 61.6 71 40.8
SGA_v2.0_scaffold195G40829 Striga asiatica HOM05D009666 ORTHO05D000277 3.1e-08 61.6 77 37.7
SGA_v2.0_scaffold19G08868 Striga asiatica HOM05D009707 ORTHO05D010215 3.1e-08 61.6 82 40.2
EL10Ac5g11589 Beta vulgaris HOM05D000034 ORTHO05D000037 4.0e-08 61.2 78 39.7
SGA_v2.0_scaffold123G33397 Striga asiatica HOM05D000034 ORTHO05D000277 4.0e-08 61.2 60 45.0
DCAR_011895 Daucus carota HOM05D000034 ORTHO05D000277 6.9e-08 60.5 70 42.9
Os02g0328500 Oryza sativa ssp. japonica HOM05D000034 ORTHO05D000277 6.9e-08 60.5 68 39.7
SGA_v2.0_scaffold19G08712 Striga asiatica HOM05D009707 ORTHO05D010215 6.9e-08 60.5 73 35.6
SGA_v2.0_scaffold380G50359 Striga asiatica HOM05D009707 ORTHO05D010215 6.9e-08 60.5 73 35.6
AUR62026394 Chenopodium quinoa HOM05D000034 ORTHO05D000037 9.0e-08 60.1 71 40.8
SGA_v2.0_scaffold16G07755 Striga asiatica HOM05D009666 ORTHO05D011401 9.0e-08 60.1 77 37.7
EL10Ac6g15045 Beta vulgaris HOM05D000034 ORTHO05D000277 1.2e-07 59.7 67 40.3
AUR62032998 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.2e-07 59.7 71 40.8
RcHm_v2.0_Chr7g0199171 Rosa chinensis HOM05D008011 ORTHO05D000277 1.2e-07 59.7 78 34.6
AUR62041902 Chenopodium quinoa HOM05D000034 ORTHO05D000277 1.5e-07 59.3 71 39.4
AUR62008330 Chenopodium quinoa HOM05D000034 ORTHO05D000037 2.0e-07 58.9 71 39.4
AUR62010683 Chenopodium quinoa HOM05D000034 ORTHO05D000037 2.0e-07 58.9 71 39.4
AUR62014907 Chenopodium quinoa HOM05D000034 ORTHO05D000277 2.0e-07 58.9 71 40.8
AUR62042450 Chenopodium quinoa HOM05D000034 ORTHO05D000277 2.0e-07 58.9 71 39.4
DCAR_007051 Daucus carota HOM05D000034 ORTHO05D000277 2.0e-07 58.9 78 39.7
DCAR_018120 Daucus carota HOM05D000034 ORTHO05D000277 2.0e-07 58.9 70 38.6
SGA_v2.0_scaffold26G11283 Striga asiatica HOM05D009666 ORTHO05D000277 2.0e-07 58.9 76 39.5
Ah.03g144290 Amaranthus hybridus HOM05D000034 ORTHO05D000277 2.6e-07 58.5 71 40.8
AUR62007332 Chenopodium quinoa HOM05D000034 ORTHO05D000037 2.6e-07 58.5 71 40.8
AUR62008289 Chenopodium quinoa HOM05D000034 ORTHO05D000277 2.6e-07 58.5 71 40.8
AUR62014937 Chenopodium quinoa HOM05D000034 ORTHO05D000037 2.6e-07 58.5 71 40.8
AUR62021533 Chenopodium quinoa HOM05D000034 ORTHO05D000277 2.6e-07 58.5 71 40.8
AUR62022569 Chenopodium quinoa HOM05D000034 ORTHO05D000277 2.6e-07 58.5 71 40.8
AUR62025847 Chenopodium quinoa HOM05D000034 ORTHO05D000277 2.6e-07 58.5 71 38.0
AUR62030444 Chenopodium quinoa HOM05D000034 ORTHO05D000037 2.6e-07 58.5 71 40.8
AUR62030491 Chenopodium quinoa HOM05D000034 ORTHO05D000277 2.6e-07 58.5 71 40.8
AUR62030811 Chenopodium quinoa HOM05D000034 ORTHO05D000277 2.6e-07 58.5 71 38.0
AUR62031611 Chenopodium quinoa HOM05D000034 ORTHO05D000037 2.6e-07 58.5 71 40.8
AUR62038760 Chenopodium quinoa HOM05D000034 ORTHO05D000277 2.6e-07 58.5 71 40.8
AUR62040605 Chenopodium quinoa HOM05D000034 ORTHO05D000277 2.6e-07 58.5 65 44.6
AUR62041010 Chenopodium quinoa HOM05D000034 ORTHO05D000277 2.6e-07 58.5 71 40.8
AUR62041276 Chenopodium quinoa HOM05D000034 ORTHO05D000277 2.6e-07 58.5 71 40.8
AUR62041774 Chenopodium quinoa HOM05D000034 ORTHO05D000277 2.6e-07 58.5 77 40.3
AUR62044007 Chenopodium quinoa HOM05D000034 ORTHO05D000277 2.6e-07 58.5 77 40.3
AUR62010704 Chenopodium quinoa HOM05D000034 ORTHO05D000277 3.4e-07 58.2 71 39.4
AUR62024632 Chenopodium quinoa HOM05D000034 ORTHO05D000277 3.4e-07 58.2 71 38.0
AUR62032529 Chenopodium quinoa HOM05D000034 ORTHO05D000277 3.4e-07 58.2 71 40.8
COL.COLO4_19702 Corchorus olitorius HOM05D000034 ORTHO05D000277 3.4e-07 58.2 77 36.4
FvH4_5g01520 Fragaria vesca HOM05D008011 ORTHO05D000277 3.4e-07 58.2 78 35.9
FAN18G3785 Fragaria x ananassa HOM05D008011 ORTHO05D000277 3.4e-07 58.2 78 35.9
GSVIVG01000536001 Vitis vinifera HOM05D000034 ORTHO05D000277 3.4e-07 58.2 61 44.3
AUR62002125 Chenopodium quinoa HOM05D000034 ORTHO05D000037 4.5e-07 57.8 71 40.8
AUR62016297 Chenopodium quinoa HOM05D000034 ORTHO05D000277 4.5e-07 57.8 71 40.8
AUR62039697 Chenopodium quinoa HOM05D000034 ORTHO05D000277 4.5e-07 57.8 71 36.6
AUR62044295 Chenopodium quinoa HOM05D000034 ORTHO05D000277 4.5e-07 57.8 71 36.6
SGA_v2.0_scaffold115G32137 Striga asiatica HOM05D009666 ORTHO05D000277 4.5e-07 57.8 77 40.3
AUR62006211 Chenopodium quinoa HOM05D000034 ORTHO05D000277 5.8e-07 57.4 76 36.8
AUR62006275 Chenopodium quinoa HOM05D000034 ORTHO05D000277 5.8e-07 57.4 71 39.4
AUR62007737 Chenopodium quinoa HOM05D000034 ORTHO05D000277 5.8e-07 57.4 71 39.4
AUR62016612 Chenopodium quinoa HOM05D000034 ORTHO05D000277 5.8e-07 57.4 71 38.0
AUR62017438 Chenopodium quinoa HOM05D000034 ORTHO05D000277 5.8e-07 57.4 71 39.4
AUR62019987 Chenopodium quinoa HOM05D000034 ORTHO05D000277 5.8e-07 57.4 71 39.4
AUR62028531 Chenopodium quinoa HOM05D000034 ORTHO05D000277 5.8e-07 57.4 71 39.4
AUR62030228 Chenopodium quinoa HOM05D000034 ORTHO05D000037 5.8e-07 57.4 71 39.4
AUR62041492 Chenopodium quinoa HOM05D000034 ORTHO05D000037 5.8e-07 57.4 71 39.4
Zm00001eb055610 Zea mays HOM05D000034 ORTHO05D000277 5.8e-07 57.4 68 42.6
Zm00001eb137320 Zea mays HOM05D000034 ORTHO05D000277 5.8e-07 57.4 68 42.6
Zm00001eb190420 Zea mays HOM05D000034 ORTHO05D000277 5.8e-07 57.4 68 42.6
Zm00001eb259640 Zea mays HOM05D000034 ORTHO05D000277 5.8e-07 57.4 68 42.6
AUR62029263 Chenopodium quinoa HOM05D000034 ORTHO05D000001 7.6e-07 57.0 71 39.4
AUR62041761 Chenopodium quinoa HOM05D000034 ORTHO05D000037 7.6e-07 57.0 71 36.6
EL10Ac3g06350 Beta vulgaris HOM05D000034 ORTHO05D000037 9.9e-07 56.6 75 37.3
EL10Ac9g22348 Beta vulgaris HOM05D000034 ORTHO05D000277 9.9e-07 56.6 70 38.6
AUR62029884 Chenopodium quinoa HOM05D000034 ORTHO05D000037 9.9e-07 56.6 71 36.6
SGA_v2.0_scaffold10G05247 Striga asiatica HOM05D000034 ORTHO05D000277 9.9e-07 56.6 69 39.1
SGA_v2.0_scaffold258G45775 Striga asiatica HOM05D000034 ORTHO05D000277 9.9e-07 56.6 77 36.4
Zm00001eb270330 Zea mays HOM05D000034 ORTHO05D000277 9.9e-07 56.6 68 41.2
Ah.03g142890 Amaranthus hybridus HOM05D000034 ORTHO05D000277 1.3e-06 56.2 67 37.3
AUR62025060 Chenopodium quinoa HOM05D000034 ORTHO05D000277 1.3e-06 56.2 71 39.4
SGA_v2.0_scaffold214G42275 Striga asiatica HOM05D009707 ORTHO05D010215 1.3e-06 56.2 70 37.1
unitig_0.g1909 Utricularia gibba HOM05D018742 ORTHO05D011401 1.3e-06 56.2 63 42.9
EL10Ac2g03259 Beta vulgaris HOM05D000034 ORTHO05D000037 1.7e-06 55.8 75 37.3
AUR62028369 Chenopodium quinoa HOM05D000034 ORTHO05D000277 1.7e-06 55.8 71 38.0
unitig_899.g14447 Utricularia gibba HOM05D009205 ORTHO05D011401 1.7e-06 55.8 61 42.6
Zm00001eb029080 Zea mays HOM05D001299 ORTHO05D000277 1.7e-06 55.8 71 38.0
Actinidia00035 Actinidia chinensis HOM05D000034 ORTHO05D000037 2.2e-06 55.5 59 39.0
Actinidia09887 Actinidia chinensis HOM05D000034 ORTHO05D000037 2.2e-06 55.5 59 39.0
EL10Ac5g12424 Beta vulgaris HOM05D000034 ORTHO05D000277 2.2e-06 55.5 71 39.4
AUR62008661 Chenopodium quinoa HOM05D000034 ORTHO05D000277 2.2e-06 55.5 71 39.4
AUR62035827 Chenopodium quinoa HOM05D000034 ORTHO05D000277 2.2e-06 55.5 71 40.8
FAN09G2726 Fragaria x ananassa HOM05D008011 ORTHO05D000277 2.2e-06 55.5 77 36.4
unitig_32.g11213 Utricularia gibba HOM05D009205 ORTHO05D011401 2.2e-06 55.5 59 42.4
Zm00001eb240080 Zea mays HOM05D000034 ORTHO05D000277 2.2e-06 55.5 66 43.9
AUR62014238 Chenopodium quinoa HOM05D000034 ORTHO05D000277 2.9e-06 55.1 70 40.0
AUR62040452 Chenopodium quinoa HOM05D000034 ORTHO05D000277 2.9e-06 55.1 71 38.0
FAN05G2985 Fragaria x ananassa HOM05D008011 ORTHO05D000277 2.9e-06 55.1 77 36.4
FAN21G0344 Fragaria x ananassa HOM05D008011 ORTHO05D000277 2.9e-06 55.1 77 36.4
FAN22G1221 Fragaria x ananassa HOM05D008011 ORTHO05D000277 2.9e-06 55.1 77 36.4
FAN25G1683 Fragaria x ananassa HOM05D008011 ORTHO05D000277 2.9e-06 55.1 77 36.4
FAN27G0091 Fragaria x ananassa HOM05D008011 ORTHO05D000277 2.9e-06 55.1 77 36.4
AUR62009575 Chenopodium quinoa HOM05D001290 ORTHO05D000037 3.8e-06 54.7 78 37.2
ECA246G1567 Erigeron canadensis HOM05D000034 ORTHO05D000277 3.8e-06 54.7 60 45.0
FAN08G2404 Fragaria x ananassa HOM05D008011 ORTHO05D000277 3.8e-06 54.7 78 34.6
vmacro11101 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 3.8e-06 54.7 70 40.0
ECA234G3517 Erigeron canadensis HOM05D000034 ORTHO05D000277 4.9e-06 54.3 72 34.7
Migut.N00931 Erythranthe guttata HOM05D000034 ORTHO05D000277 4.9e-06 54.3 75 38.7
FAN04G0445 Fragaria x ananassa HOM05D008011 ORTHO05D000277 4.9e-06 54.3 78 34.6
Actinidia03627 Actinidia chinensis HOM05D000034 ORTHO05D000277 6.4e-06 53.9 67 43.3
DCAR_005292 Daucus carota HOM05D000034 ORTHO05D000277 6.4e-06 53.9 70 37.1
FAN13G0966 Fragaria x ananassa HOM05D008011 ORTHO05D000277 6.4e-06 53.9 78 34.6
FAN22G0968 Fragaria x ananassa HOM05D008011 ORTHO05D000277 6.4e-06 53.9 77 35.1
FAN27G3399 Fragaria x ananassa HOM05D008011 ORTHO05D000277 6.4e-06 53.9 68 38.2
Os11g0205200 Oryza sativa ssp. japonica HOM05D000034 ORTHO05D000277 6.4e-06 53.9 61 41.0
SGA_v2.0_scaffold409G51096 Striga asiatica HOM05D009666 ORTHO05D000277 6.4e-06 53.9 71 35.2
vmacro22639 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 6.4e-06 53.9 87 36.8
EL10Ac4g08596 Beta vulgaris HOM05D000034 ORTHO05D000277 8.4e-06 53.5 68 39.7
CANSAT56G2768 Cannabis sativa HOM05D008011 ORTHO05D000277 8.4e-06 53.5 78 33.3
AUR62001787 Chenopodium quinoa HOM05D000034 ORTHO05D000277 8.4e-06 53.5 78 35.9
HanXRQChr10g0300111 Helianthus annuus HOM05D000034 ORTHO05D000277 8.4e-06 53.5 76 34.2


User provided reference genes

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