Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_61.g26430 Utricularia gibba HOM05D000818 ORTHO05D001324 2.7e-161 572.0 298 100.0
SGA_v2.0_scaffold52G19225 Striga asiatica HOM05D000818 ORTHO05D001324 3.0e-27 126.7 192 44.8
MSTRG.20692 Avicennia marina HOM05D000818 ORTHO05D001324 2.8e-25 120.2 93 69.9
unitig_8.g3851 Utricularia gibba HOM05D000818 ORTHO05D001324 1.4e-21 107.8 213 39.4
Oeu024168.1 Olea europaea HOM05D000818 ORTHO05D001324 2.4e-21 107.1 81 71.6
SalBow5G3905 Salvia bowleyana HOM05D000818 ORTHO05D001324 3.2e-21 106.7 142 50.7
CAN.G1473.11 Capsicum annuum HOM05D000818 ORTHO05D001324 1.0e-19 101.7 90 58.9
Rhsim07G0035800 Rhododendron simsii HOM05D000818 ORTHO05D001324 2.5e-18 97.1 107 57.0
Migut.N01737 Erythranthe guttata HOM05D000818 ORTHO05D001324 3.3e-18 96.7 66 77.3
AL1G10120 Arabidopsis lyrata HOM05D000818 ORTHO05D001324 7.3e-18 95.5 112 54.5
Ciclev10018930m.g Citrus clementina HOM05D000818 ORTHO05D001324 1.6e-17 94.4 81 63.0
Carub.0001s0011 Capsella rubella HOM05D000818 ORTHO05D001324 1.1e-16 91.7 123 48.8
SalBow5G2839 Salvia bowleyana HOM05D000818 ORTHO05D001324 1.8e-16 90.9 135 45.9
SalBow5G2909 Salvia bowleyana HOM05D000818 ORTHO05D001324 1.8e-16 90.9 135 45.9
CARHR170640 Cardamine hirsuta HOM05D000818 ORTHO05D001324 4.0e-16 89.7 128 47.7
CSS0027266 Camellia sinensis var. sinensis HOM05D000818 ORTHO05D001324 1.5e-15 87.8 106 50.9
Cc02_g25100 Coffea canephora HOM05D000818 ORTHO05D001324 1.5e-15 87.8 120 46.7
C08p35320 Brassica napus HOM05D000818 ORTHO05D001324 2.0e-15 87.4 91 53.8
BolC8t51125H Brassica oleracea HOM05D000818 ORTHO05D001324 2.0e-15 87.4 91 53.8
CiPaw.13G026400 Carya illinoinensis HOM05D000818 ORTHO05D001324 2.6e-15 87.0 79 60.8
CSS0039590 Camellia sinensis var. sinensis HOM05D000818 ORTHO05D001324 3.4e-15 86.7 106 50.0
TWI14G1028 Tripterygium wilfordii HOM05D000818 ORTHO05D001324 4.4e-15 86.3 86 54.7
Eucgr.D01227 Eucalyptus grandis HOM05D000818 ORTHO05D001324 9.8e-15 85.1 84 58.3
Potri.002G137600 Populus trichocarpa HOM05D000818 ORTHO05D001324 9.8e-15 85.1 84 56.0
AT1G02110 Arabidopsis thaliana HOM05D000818 ORTHO05D001324 1.3e-14 84.7 242 36.0
A09p52560 Brassica napus HOM05D000818 ORTHO05D001324 1.3e-14 84.7 89 51.7
BraA09t40687Z Brassica rapa HOM05D000818 ORTHO05D001324 1.3e-14 84.7 89 51.7
THA.LOC104802494 Tarenaya hassleriana HOM05D000818 ORTHO05D001324 1.3e-14 84.7 150 42.0
C04p32320 Brassica napus HOM05D000818 ORTHO05D001324 2.2e-14 84.0 174 39.1
BolC4t24782H Brassica oleracea HOM05D000818 ORTHO05D001324 2.2e-14 84.0 174 39.1
Dinv43618 Davidia involucrata HOM05D000818 ORTHO05D001324 2.9e-14 83.6 190 37.4
Thhalv10006946m.g Eutrema salsugineum HOM05D000818 ORTHO05D001324 4.9e-14 82.8 175 40.6
Sabra14G0034400 Salix brachista HOM05D000818 ORTHO05D001324 4.9e-14 82.8 68 64.7
Sp1g00160 Schrenkiella parvula HOM05D000818 ORTHO05D001324 4.9e-14 82.8 180 38.9
Haze_02844 Corylus avellana HOM05D000818 ORTHO05D001324 6.4e-14 82.4 72 63.9
SGA_v2.0_scaffold116G32291 Striga asiatica HOM05D000818 ORTHO05D001324 1.1e-13 81.6 123 48.0
A04p01690 Brassica napus HOM05D000818 ORTHO05D001324 1.4e-13 81.3 183 37.7
Nn1g00855 Nelumbo nucifera HOM05D000818 ORTHO05D001324 1.4e-13 81.3 80 57.5
CARHR000220 Cardamine hirsuta HOM05D000818 ORTHO05D001324 1.9e-13 80.9 170 38.8
Nn6g33830 Nelumbo nucifera HOM05D000818 ORTHO05D001324 1.9e-13 80.9 108 47.2
BcaC02g10147 Brassica carinata HOM05D000818 ORTHO05D001324 3.2e-13 80.1 165 39.4
A03p24960 Brassica napus HOM05D000818 ORTHO05D001324 4.1e-13 79.7 67 59.7
BraA03t11699Z Brassica rapa HOM05D000818 ORTHO05D001324 4.1e-13 79.7 67 59.7
Carub.0005s2707 Capsella rubella HOM05D000818 ORTHO05D001324 4.1e-13 79.7 82 57.3
Actinidia32501 Actinidia chinensis HOM05D000818 ORTHO05D001324 7.1e-13 79.0 87 55.2
Thhalv10001315m.g Eutrema salsugineum HOM05D000818 ORTHO05D001324 7.1e-13 79.0 109 46.8
HanXRQChr16g0521311 Helianthus annuus HOM05D000818 ORTHO05D001324 9.2e-13 78.6 132 45.5
Potri.014G047400 Populus trichocarpa HOM05D000818 ORTHO05D001324 9.2e-13 78.6 211 32.7
Aa31LG1G26380 Aethionema arabicum HOM05D000818 ORTHO05D001324 1.2e-12 78.2 129 45.0
Sopen01g036060 Solanum pennellii HOM05D000818 ORTHO05D001324 1.2e-12 78.2 92 47.8
PGSC0003DMG400025994 Solanum tuberosum HOM05D000818 ORTHO05D001324 1.2e-12 78.2 92 47.8
AT3G60320 Arabidopsis thaliana HOM05D000818 ORTHO05D001324 1.6e-12 77.8 123 46.3
Solyc01g090270.4 Solanum lycopersicum HOM05D000818 ORTHO05D001324 1.6e-12 77.8 88 48.9
DCAR_029467 Daucus carota HOM05D000818 ORTHO05D001324 2.1e-12 77.4 126 40.5
vmacro13495 Vaccinium macrocarpon HOM05D000818 ORTHO05D001324 2.1e-12 77.4 73 64.4
AL4G43920 Arabidopsis lyrata HOM05D000818 ORTHO05D001324 3.5e-12 76.6 115 45.2
BraA04t15893Z Brassica rapa HOM05D000818 ORTHO05D001324 3.5e-12 76.6 89 50.6
MD07G1108500 Malus domestica HOM05D000818 ORTHO05D001324 4.6e-12 76.3 67 56.7
C03p29730 Brassica napus HOM05D000818 ORTHO05D001324 6.0e-12 75.9 83 53.0
BolC3t15323H Brassica oleracea HOM05D000818 ORTHO05D001324 6.0e-12 75.9 83 53.0
ECA234G3360 Erigeron canadensis HOM05D000818 ORTHO05D001324 7.8e-12 75.5 60 61.7
BcaB02g08176 Brassica carinata HOM05D000818 ORTHO05D001324 1.0e-11 75.1 85 54.1
VMungo0331G1446 Vigna mungo HOM05D000818 ORTHO05D001324 1.0e-11 75.1 153 35.3
AL5G42540 Arabidopsis lyrata HOM05D000818 ORTHO05D001324 1.3e-11 74.7 133 44.4
Peaxi162Scf00475g00517 Petunia axillaris HOM05D000818 ORTHO05D001324 1.3e-11 74.7 98 46.9
THA.LOC104817191 Tarenaya hassleriana HOM05D000818 ORTHO05D001324 1.3e-11 74.7 166 39.8
Cfa011073 Carpinus fangiana HOM05D000818 ORTHO05D001324 1.7e-11 74.3 89 51.7
Lsat_1_v5_gn_4_39741 Lactuca sativa HOM05D000818 ORTHO05D001324 1.7e-11 74.3 169 36.7
Atru.chr5.129 Acer truncatum HOM05D000818 ORTHO05D001324 3.0e-11 73.6 80 53.8
CiPaw.14G020700 Carya illinoinensis HOM05D000818 ORTHO05D001324 3.0e-11 73.6 93 52.7
Thhalv10005793m.g Eutrema salsugineum HOM05D000818 ORTHO05D001324 3.0e-11 73.6 168 39.9
HanXRQChr17g0562501 Helianthus annuus HOM05D000818 ORTHO05D001324 3.9e-11 73.2 74 55.4
CANSAT21G0338 Cannabis sativa HOM05D000818 ORTHO05D001324 6.6e-11 72.4 115 41.7
Carub.0004s2741 Capsella rubella HOM05D000818 ORTHO05D001324 6.6e-11 72.4 118 44.9
Sp5g02910 Schrenkiella parvula HOM05D000818 ORTHO05D001324 6.6e-11 72.4 157 37.6
PGR004G0558 Punica granatum HOM05D000818 ORTHO05D001324 8.6e-11 72.0 112 41.1
QL04p030348 Quercus lobata HOM05D000818 ORTHO05D001324 8.6e-11 72.0 149 38.3
MELO3C022278.2 Cucumis melo HOM05D000818 ORTHO05D001324 1.1e-10 71.6 126 42.9
CsaV3_6G008620 Cucumis sativus L. HOM05D000818 ORTHO05D001324 1.1e-10 71.6 126 42.9
FAN10G3602 Fragaria x ananassa HOM05D000818 ORTHO05D001324 2.5e-10 70.5 123 41.5
arahy.Tifrunner.gnm1.ann1.TH0YQP Arachis hypogaea HOM05D000818 ORTHO05D001324 3.3e-10 70.1 68 57.4
arahy.Tifrunner.gnm1.ann1.YC8C9S Arachis hypogaea HOM05D000818 ORTHO05D001324 3.3e-10 70.1 68 57.4
unitig_578.g16711 Utricularia gibba HOM05D000818 ORTHO05D001324 3.3e-10 70.1 90 47.8
ClCG06G002500 Citrullus lanatus HOM05D000818 ORTHO05D001324 4.3e-10 69.7 98 45.9
FAN10G0853 Fragaria x ananassa HOM05D000818 ORTHO05D001324 5.6e-10 69.3 124 41.9
Duzib133G0528 Durio zibethinus HOM05D000818 ORTHO05D001324 7.3e-10 68.9 116 40.5
Oeu020084.1 Olea europaea HOM05D000818 ORTHO05D001324 7.3e-10 68.9 173 36.4
Actinidia12145 Actinidia chinensis HOM05D000818 ORTHO05D001324 9.5e-10 68.6 111 44.1
Gohir.D08G067600 Gossypium hirsutum HOM05D000818 ORTHO05D001324 9.5e-10 68.6 107 43.0
Gorai.004G070400 Gossypium raimondii HOM05D000818 ORTHO05D001324 9.5e-10 68.6 107 43.0
Thecc.01G394700 Theobroma cacao HOM05D000818 ORTHO05D001324 9.5e-10 68.6 128 40.6
COL.COLO4_12411 Corchorus olitorius HOM05D000818 ORTHO05D001324 1.6e-09 67.8 93 45.2
Gohir.A08G058500 Gossypium hirsutum HOM05D000818 ORTHO05D001324 2.1e-09 67.4 107 43.0
Gohir.A08G138400 Gossypium hirsutum HOM05D000818 ORTHO05D001324 2.1e-09 67.4 123 36.6
Sp4g26930 Schrenkiella parvula HOM05D000818 ORTHO05D001324 2.1e-09 67.4 141 38.3
Nitab4.5_0013736g0010 Nicotiana tabacum HOM05D000818 ORTHO05D001324 2.8e-09 67.0 75 52.0
Sc02g0003090 Simmondsia chinensis HOM05D000818 ORTHO05D001324 2.8e-09 67.0 66 54.5
CANSAT21G2497 Cannabis sativa HOM05D000818 ORTHO05D001324 3.6e-09 66.6 53 60.4
SHI13617 Sapria himalayana HOM05D000818 ORTHO05D001324 3.6e-09 66.6 112 42.9
Gohir.A11G075400 Gossypium hirsutum HOM05D000818 ORTHO05D001324 4.7e-09 66.2 115 41.7
TAR629G1362 Trochodendron aralioides HOM05D000818 ORTHO05D001324 8.1e-09 65.5 81 48.1
FAN03G2811 Fragaria x ananassa HOM05D000818 ORTHO05D001324 1.1e-08 65.1 70 51.4
Gorai.007G085700 Gossypium raimondii HOM05D000818 ORTHO05D001324 1.4e-08 64.7 115 40.0
CARHR140080 Cardamine hirsuta HOM05D000818 ORTHO05D001324 1.8e-08 64.3 219 32.9
FAN01G1404 Fragaria x ananassa HOM05D000818 ORTHO05D001324 1.8e-08 64.3 70 51.4
TWI59G1205 Tripterygium wilfordii HOM05D000818 ORTHO05D001324 2.3e-08 63.9 98 41.8
Gorai.004G165900 Gossypium raimondii HOM05D000818 ORTHO05D001324 3.1e-08 63.5 123 36.6
Prupe.2G131300 Prunus persica HOM05D000818 ORTHO05D001324 3.1e-08 63.5 51 56.9
arahy.Tifrunner.gnm1.ann1.27NEX2 Arachis hypogaea HOM05D000818 ORTHO05D001324 4.0e-08 63.2 88 45.5
arahy.Tifrunner.gnm1.ann1.U024VF Arachis hypogaea HOM05D000818 ORTHO05D001324 4.0e-08 63.2 89 46.1
Medtr7g081705 Medicago truncatula HOM05D000818 ORTHO05D001324 4.0e-08 63.2 66 57.6
Ca_08069_v3 Cicer arietinum L. HOM05D000818 ORTHO05D001324 5.2e-08 62.8 68 55.9
Duzib138G0248 Durio zibethinus HOM05D000818 ORTHO05D001324 5.2e-08 62.8 114 41.2
Gohir.D11G080100 Gossypium hirsutum HOM05D000818 ORTHO05D001324 5.2e-08 62.8 115 40.0
Hund17087 Selenicereus undatus HOM05D000818 ORTHO05D001324 5.2e-08 62.8 31 83.9
CDE09G1039 Ceratophyllum demersum HOM05D000818 ORTHO05D001324 6.8e-08 62.4 147 36.1
Phvul.008G046800 Phaseolus vulgaris HOM05D000818 ORTHO05D001324 6.8e-08 62.4 91 45.1
PSO675G5646 Papaver somniferum HOM05D000818 ORTHO05D001324 8.9e-08 62.0 77 46.8
PSO732G0390 Papaver somniferum HOM05D000818 ORTHO05D001324 1.2e-07 61.6 77 46.8
Sed0002445 Sechium edule HOM05D000818 ORTHO05D001324 1.2e-07 61.6 141 35.5
VMungo1383G0257 Vigna mungo HOM05D000818 ORTHO05D001324 1.2e-07 61.6 66 56.1
AUR62013745 Chenopodium quinoa HOM05D000818 ORTHO05D001324 2.0e-07 60.8 44 68.2
MD02G1212400 Malus domestica HOM05D000818 ORTHO05D001324 3.4e-07 60.1 35 68.6
Glyma.09G242800 Glycine max HOM05D000818 ORTHO05D001324 5.8e-07 59.3 62 56.5
vmacro21058 Vaccinium macrocarpon HOM05D000818 ORTHO05D001324 1.3e-06 58.2 112 39.3
CDE11G1168 Ceratophyllum demersum HOM05D000818 ORTHO05D001324 1.7e-06 57.8 186 32.8
ATR0057G102 Amborella trichopoda HOM05D000818 ORTHO05D001324 2.9e-06 57.0 178 28.7
CSS0009534 Camellia sinensis var. sinensis HOM05D000818 ORTHO05D001324 3.8e-06 56.6 74 48.6
Ca_25806_v3 Cicer arietinum L. HOM05D000818 ORTHO05D001324 6.4e-06 55.8 165 36.4
Lj3g0019294 Lotus japonicus HOM05D000818 ORTHO05D001324 6.4e-06 55.8 106 40.6
Phvul.010G050100 Phaseolus vulgaris HOM05D000818 ORTHO05D001324 8.4e-06 55.5 202 28.7
Psat4g224960 Pisum sativum HOM05D000818 ORTHO05D001324 8.4e-06 55.5 102 45.1


User provided reference genes

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