Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_61.g26418 Utricularia gibba HOM05D006675 ORTHO05D008302 8.5e-185 650.2 332 100.0
MSTRG.1795 Avicennia marina HOM05D006675 ORTHO05D008302 3.5e-77 292.7 162 84.0
SGA_v2.0_scaffold8G04421 Striga asiatica HOM05D006675 ORTHO05D008302 2.5e-75 286.6 161 82.6
GSVIVG01013027001 Vitis vinifera HOM05D006675 ORTHO05D008302 3.2e-75 286.2 162 80.9
SalBow8G0964 Salvia bowleyana HOM05D006675 ORTHO05D008302 5.5e-75 285.4 162 82.7
Migut.E01322 Erythranthe guttata HOM05D006675 ORTHO05D008302 2.7e-74 283.1 162 82.1
Oeu017091.1 Olea europaea HOM05D006675 ORTHO05D008302 8.0e-74 281.6 160 82.5
CiPaw.12G069400 Carya illinoinensis HOM05D006675 ORTHO05D008302 1.0e-73 281.2 162 80.9
TWI60G1033 Tripterygium wilfordii HOM05D006675 ORTHO05D008302 4.0e-73 279.3 162 79.0
QL12p001835 Quercus lobata HOM05D006675 ORTHO05D008302 5.2e-73 278.9 161 79.5
Aqoxy5G00552 Aquilegia oxysepala HOM05D006675 ORTHO05D008302 6.8e-73 278.5 162 79.6
RcHm_v2.0_Chr7g0212211 Rosa chinensis HOM05D006675 ORTHO05D008302 8.8e-73 278.1 162 79.0
Peaxi162Scf00052g00336 Petunia axillaris HOM05D006675 ORTHO05D008302 2.6e-72 276.6 158 79.7
PGSC0003DMG400009297 Solanum tuberosum HOM05D006675 ORTHO05D008302 2.6e-72 276.6 162 79.0
CAN.G773.29 Capsicum annuum HOM05D006675 ORTHO05D008302 3.4e-72 276.2 162 79.0
Atru.chr3.2397 Acer truncatum HOM05D006675 ORTHO05D008302 4.4e-72 275.8 162 79.6
Duzib205G0370 Durio zibethinus HOM05D006675 ORTHO05D008302 4.4e-72 275.8 162 77.8
Sc10g0009260 Simmondsia chinensis HOM05D006675 ORTHO05D008302 4.4e-72 275.8 162 75.9
Thecc.03G311400 Theobroma cacao HOM05D006675 ORTHO05D008302 5.7e-72 275.4 162 78.4
Ciclev10002637m.g Citrus clementina HOM05D006675 ORTHO05D008302 7.5e-72 275.0 162 78.4
Dinv06918 Davidia involucrata HOM05D006675 ORTHO05D008302 7.5e-72 275.0 158 81.0
PGSC0003DMG400003501 Solanum tuberosum HOM05D006675 ORTHO05D008302 9.8e-72 274.6 162 78.4
Solyc08g076130.3 Solanum lycopersicum HOM05D006675 ORTHO05D008302 1.3e-71 274.2 162 78.4
Sopen08g024770 Solanum pennellii HOM05D006675 ORTHO05D008302 1.3e-71 274.2 162 78.4
Cfa009033 Carpinus fangiana HOM05D006675 ORTHO05D008302 1.7e-71 273.9 162 78.4
CANSAT21G2314 Cannabis sativa HOM05D006675 ORTHO05D008302 2.8e-71 273.1 162 78.4
COL.COLO4_16920 Corchorus olitorius HOM05D006675 ORTHO05D008302 2.8e-71 273.1 162 77.8
Potri.001G135700 Populus trichocarpa HOM05D006675 ORTHO05D008302 3.7e-71 272.7 162 77.2
Manes.01G194600 Manihot esculenta HOM05D006675 ORTHO05D008302 4.8e-71 272.3 162 75.9
Sed0011153 Sechium edule HOM05D006675 ORTHO05D008302 4.8e-71 272.3 162 77.8
MELO3C013816.2 Cucumis melo HOM05D006675 ORTHO05D008302 8.3e-71 271.6 162 77.8
Lj8A133G65 Lonicera japonica HOM05D006675 ORTHO05D008302 8.3e-71 271.6 163 74.8
PGR042G1238 Punica granatum HOM05D006675 ORTHO05D008302 8.3e-71 271.6 162 77.2
AUR62007364 Chenopodium quinoa HOM05D006675 ORTHO05D008302 1.4e-70 270.8 167 74.9
CsaV3_3G001280 Cucumis sativus L. HOM05D006675 ORTHO05D008302 1.4e-70 270.8 162 77.2
Cc08_g03740 Coffea canephora HOM05D006675 ORTHO05D008302 2.4e-70 270.0 162 77.8
FvH4_5g23270 Fragaria vesca HOM05D006675 ORTHO05D008302 2.4e-70 270.0 162 76.5
FAN18G2874 Fragaria x ananassa HOM05D006675 ORTHO05D008302 2.4e-70 270.0 162 76.5
ECA233G1922 Erigeron canadensis HOM05D006675 ORTHO05D008302 4.1e-70 269.2 162 73.5
Gohir.D03G176700 Gossypium hirsutum HOM05D006675 ORTHO05D008302 4.1e-70 269.2 162 77.8
CSS0012354 Camellia sinensis var. sinensis HOM05D006675 ORTHO05D008302 5.4e-70 268.9 162 76.5
CSS0042811 Camellia sinensis var. sinensis HOM05D006675 ORTHO05D008302 5.4e-70 268.9 162 76.5
Haze_12062 Corylus avellana HOM05D006675 ORTHO05D008302 5.4e-70 268.9 162 76.5
FAN18G0120 Fragaria x ananassa HOM05D006675 ORTHO05D008302 7.0e-70 268.5 162 75.9
HanXRQChr12g0362191 Helianthus annuus HOM05D006675 ORTHO05D008302 1.6e-69 267.3 162 74.1
Gohir.A03G000027 Gossypium hirsutum HOM05D006675 ORTHO05D008302 2.0e-69 266.9 162 75.9
DCAR_024956 Daucus carota HOM05D006675 ORTHO05D008302 2.7e-69 266.5 162 75.3
Eucgr.E01319 Eucalyptus grandis HOM05D006675 ORTHO05D008302 3.5e-69 266.2 176 69.3
AL7G35150 Arabidopsis lyrata HOM05D006675 ORTHO05D008302 4.5e-69 265.8 162 75.3
Duzib068G1343 Durio zibethinus HOM05D006675 ORTHO05D008302 4.5e-69 265.8 162 75.3
Sp7g17730 Schrenkiella parvula HOM05D006675 ORTHO05D008302 4.5e-69 265.8 162 74.7
AT4G19003 Arabidopsis thaliana HOM05D006675 ORTHO05D008302 7.7e-69 265.0 162 74.7
Carub.0007s2216 Capsella rubella HOM05D006675 ORTHO05D008302 7.7e-69 265.0 162 74.7
Lj2g0021996 Lotus japonicus HOM05D006675 ORTHO05D008302 1.3e-68 264.2 162 72.8
Lalb_Chr16g0380971 Lupinus albus HOM05D006675 ORTHO05D008302 1.3e-68 264.2 162 72.8
THA.LOC104806177 Tarenaya hassleriana HOM05D006675 ORTHO05D008302 1.3e-68 264.2 162 74.1
Thhalv10026368m.g Eutrema salsugineum HOM05D006675 ORTHO05D008302 1.7e-68 263.8 162 74.1
VMungo1215G1847 Vigna mungo HOM05D006675 ORTHO05D008302 1.7e-68 263.8 162 74.1
Eucgr.E01313 Eucalyptus grandis HOM05D006675 ORTHO05D008302 2.9e-68 263.1 157 75.2
Lsat_1_v5_gn_9_15400 Lactuca sativa HOM05D006675 ORTHO05D008302 2.9e-68 263.1 156 75.6
MD11G1243800 Malus domestica HOM05D006675 ORTHO05D008302 2.9e-68 263.1 163 73.6
Actinidia01330 Actinidia chinensis HOM05D006675 ORTHO05D008302 3.8e-68 262.7 155 77.4
BcaNung04023 Brassica carinata HOM05D006675 ORTHO05D008302 3.8e-68 262.7 162 74.1
PSO170G4469 Papaver somniferum HOM05D006675 ORTHO05D008302 3.8e-68 262.7 160 74.4
BraA01t01049Z Brassica rapa HOM05D006675 ORTHO05D008302 6.5e-68 261.9 162 73.5
Rhsim06G0208000 Rhododendron simsii HOM05D006675 ORTHO05D008302 6.5e-68 261.9 183 68.3
HPP92_023365 Vanilla planifolia HOM05D006675 ORTHO05D008302 6.5e-68 261.9 162 72.8
Glyma.09G209600 Glycine max HOM05D006675 ORTHO05D008302 1.1e-67 261.2 162 73.5
BcaC09g51446 Brassica carinata HOM05D000169 ORTHO05D008302 1.5e-67 260.8 162 72.8
BolC1t01279H Brassica oleracea HOM05D000169 ORTHO05D000542 1.5e-67 260.8 162 72.8
Phvul.002G134300 Phaseolus vulgaris HOM05D006675 ORTHO05D008302 1.5e-67 260.8 162 72.8
Prupe.4G182100 Prunus persica HOM05D006675 ORTHO05D008302 1.5e-67 260.8 161 73.9
Nn1g09734 Nelumbo nucifera HOM05D006675 ORTHO05D008302 1.9e-67 260.4 162 74.1
THA.LOC104798450 Tarenaya hassleriana HOM05D006675 ORTHO05D008302 1.9e-67 260.4 160 74.4
Aa31LG6G1700 Aethionema arabicum HOM05D006675 ORTHO05D008302 2.5e-67 260.0 162 74.1
C01p13040 Brassica napus HOM05D000169 ORTHO05D000542 2.5e-67 260.0 162 72.8
CARHR225840 Cardamine hirsuta HOM05D006675 ORTHO05D008302 2.5e-67 260.0 162 72.8
HanXRQChr14g0430781 Helianthus annuus HOM05D006675 ORTHO05D008302 1.2e-66 257.7 163 72.4
Medtr5g028000 Medicago truncatula HOM05D006675 ORTHO05D008302 1.6e-66 257.3 162 71.0
Ca_25161_v3 Cicer arietinum L. HOM05D006675 ORTHO05D000003 4.7e-66 255.8 160 71.2
Glyma.01G011400 Glycine max HOM05D006675 ORTHO05D008302 4.7e-66 255.8 162 71.0
EL10Ac5g11997 Beta vulgaris HOM05D006675 ORTHO05D008302 1.8e-65 253.8 159 74.8
ATR0796G253 Amborella trichopoda HOM05D006675 ORTHO05D008302 4.0e-65 252.7 160 71.9
PSO017G0801 Papaver somniferum HOM05D006675 ORTHO05D008302 4.0e-65 252.7 160 73.1
ClCG06G010630 Citrullus lanatus HOM05D006675 ORTHO05D008302 2.6e-64 250.0 172 70.3
Thhalv10015765m.g Eutrema salsugineum HOM05D006675 ORTHO05D008302 3.7e-63 246.1 162 69.1
Zm00001eb157890 Zea mays HOM05D006675 ORTHO05D008302 1.2e-61 241.1 162 68.5
CDE02G0997 Ceratophyllum demersum HOM05D006675 ORTHO05D008302 5.9e-61 238.8 160 70.6
BcaNung06620 Brassica carinata HOM05D006675 ORTHO05D008302 1.0e-60 238.0 185 61.1
Mapoly0004s0185 Marchantia polymorpha HOM05D006675 ORTHO05D008302 1.3e-60 237.7 160 66.2
SEGI_13659 Sequoiadendron giganteum HOM05D006675 ORTHO05D008302 4.7e-58 229.2 162 64.2
Nitab4.5_0002897g0050 Nicotiana tabacum HOM05D006675 ORTHO05D008302 8.9e-57 224.9 162 66.0
SMO364G0912 Selaginella moellendorffii HOM05D006675 ORTHO05D008302 1.7e-55 220.7 160 61.2
Dinv29017 Davidia involucrata HOM05D006675 ORTHO05D008302 2.3e-52 210.3 135 71.9
Pp3c15_1420 Physcomitrium patens HOM05D006675 ORTHO05D008302 5.0e-52 209.1 160 58.1
SGA_v2.0_scaffold8G04249 Striga asiatica HOM05D006675 ORTHO05D008302 5.6e-51 205.7 126 77.8
Gorai.003G186000 Gossypium raimondii HOM05D006675 ORTHO05D008302 2.1e-50 203.8 121 76.9
Sabra01G0105000 Salix brachista HOM05D006675 ORTHO05D008302 8.0e-50 201.8 174 58.6
Nitab4.5_0002188g0010 Nicotiana tabacum HOM05D006675 ORTHO05D008302 4.0e-49 199.5 140 69.3
CBR_g10842 Chara braunii HOM05D006675 ORTHO05D008302 2.6e-48 196.8 159 54.7
TPR.G19460 Trifolium pratense HOM05D006675 ORTHO05D008302 3.4e-48 196.4 121 71.1
arahy.Tifrunner.gnm1.ann1.XR7VEH Arachis hypogaea HOM05D006675 ORTHO05D008302 5.4e-46 189.1 147 57.8
AagrBONN_evm.TU.Sc2ySwM_228.5837 Anthoceros agrestis HOM05D006675 ORTHO05D008302 2.7e-45 186.8 146 59.6
arahy.Tifrunner.gnm1.ann1.1JB7Z5 Arachis hypogaea HOM05D000001 ORTHO05D000003 5.6e-43 179.1 183 53.0
arahy.Tifrunner.gnm1.ann1.K4EES2 Arachis hypogaea HOM05D000001 ORTHO05D000003 5.6e-43 179.1 183 53.0
Cre02.g076400 Chlamydomonas reinhardtii HOM05D006675 ORTHO05D008302 7.5e-40 168.7 159 47.2
Psat6g005760 Pisum sativum HOM05D001533 ORTHO05D005122 9.2e-38 161.8 96 71.9
Ah.12g055570 Amaranthus hybridus HOM05D000160 ORTHO05D008302 4.6e-37 159.5 113 71.7
vmacro00263 Vaccinium macrocarpon HOM05D006675 ORTHO05D008302 5.2e-33 146.0 104 68.3
arahy.Tifrunner.gnm1.ann1.DBHH8D Arachis hypogaea HOM05D006675 ORTHO05D008302 5.8e-32 142.5 116 54.3
PRCOL_00001914 Prasinoderma coloniale HOM05D006675 ORTHO05D008302 7.6e-32 142.1 162 45.1
Hma1.2p1_0803F.1_g220920 Hydrangea macrophylla HOM05D006675 ORTHO05D008302 1.7e-31 141.0 177 44.1
MCO12G007 Micromonas commoda HOM05D006675 ORTHO05D008302 9.2e-30 135.2 160 39.4
Psat2g139880 Pisum sativum HOM05D006675 ORTHO05D008302 4.6e-29 132.9 91 63.7
GSVIVG01009131001 Vitis vinifera HOM05D006675 ORTHO05D008302 4.3e-27 126.3 90 65.6
Os01g0658500 Oryza sativa ssp. japonica HOM05D006675 ORTHO05D008302 9.6e-27 125.2 74 73.0
Actinidia29284 Actinidia chinensis HOM05D006675 ORTHO05D008302 1.6e-18 97.8 65 70.8
BcaB07g30589 Brassica carinata HOM05D006675 ORTHO05D008302 1.6e-18 97.8 79 57.0
Hund14383 Selenicereus undatus HOM05D006675 ORTHO05D008302 1.2e-16 91.7 56 75.0
A01p11020 Brassica napus HOM05D006675 ORTHO05D008302 2.0e-16 90.9 56 80.4
BcaB06g29627 Brassica carinata HOM05D006675 ORTHO05D008302 3.4e-16 90.1 80 58.8
Haze_08131 Corylus avellana HOM05D006675 ORTHO05D008302 7.6e-16 89.0 74 56.8
FAN13G1728 Fragaria x ananassa HOM05D006675 ORTHO05D008302 4.6e-13 79.7 46 71.7
CARHR288450 Cardamine hirsuta HOM05D006675 ORTHO05D008302 2.3e-12 77.4 56 53.6
Cfa024503 Carpinus fangiana HOM05D006675 ORTHO05D008302 5.3e-09 66.2 166 27.1
Gohir.D12G043050 Gossypium hirsutum HOM05D006675 ORTHO05D008302 8.4e-07 58.9 45 62.2
Phvul.002G134150 Phaseolus vulgaris HOM05D006675 ORTHO05D008302 5.5e-06 56.2 57 49.1


User provided reference genes

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