Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_61.g26415 Utricularia gibba HOM05D004705 ORTHO05D005595 5.7e-300 1033.5 523 100.0
unitig_26.g8885 Utricularia gibba HOM05D004705 ORTHO05D005595 2.1e-161 573.2 573 58.1
SalBow5G4930 Salvia bowleyana HOM05D004705 ORTHO05D005595 3.6e-153 545.8 519 58.6
SGA_v2.0_scaffold153G36966 Striga asiatica HOM05D004705 ORTHO05D005595 1.7e-150 537.0 481 61.5
GSVIVG01017208001 Vitis vinifera HOM05D004705 ORTHO05D005595 6.1e-145 518.5 516 57.2
Oeu051920.1 Olea europaea HOM05D004705 ORTHO05D005595 2.3e-144 516.5 525 55.8
Peaxi162Scf00015g00532 Petunia axillaris HOM05D004705 ORTHO05D005595 2.0e-143 513.5 454 59.9
CAN.G438.96 Capsicum annuum HOM05D004705 ORTHO05D005595 5.7e-143 511.9 482 57.7
vmacro16932 Vaccinium macrocarpon HOM05D004705 ORTHO05D005595 9.8e-143 511.1 463 59.0
PGSC0003DMG400005697 Solanum tuberosum HOM05D004705 ORTHO05D005595 1.7e-142 510.4 517 55.9
MSTRG.20727 Avicennia marina HOM05D004705 ORTHO05D005595 3.7e-142 509.2 530 55.3
Cc04_g03760 Coffea canephora HOM05D004705 ORTHO05D005595 1.8e-141 506.9 484 57.4
Dinv38075 Davidia involucrata HOM05D004705 ORTHO05D005595 3.1e-141 506.1 464 58.8
Sopen03g038820 Solanum pennellii HOM05D004705 ORTHO05D005595 1.6e-140 503.8 522 54.2
Solyc03g119940.3 Solanum lycopersicum HOM05D004705 ORTHO05D005595 4.5e-140 502.3 454 59.0
Gohir.D03G064900 Gossypium hirsutum HOM05D004705 ORTHO05D005595 5.0e-139 498.8 474 58.4
Gorai.002G057500 Gossypium raimondii HOM05D004705 ORTHO05D005595 5.0e-139 498.8 474 58.4
Gohir.A02G124100 Gossypium hirsutum HOM05D004705 ORTHO05D005595 3.3e-138 496.1 433 61.4
Manes.04G119400 Manihot esculenta HOM05D004705 ORTHO05D005595 1.6e-137 493.8 435 60.5
Thecc.06G077700 Theobroma cacao HOM05D004705 ORTHO05D005595 1.4e-136 490.7 469 56.7
ClCG07G012910 Citrullus lanatus HOM05D004705 ORTHO05D005595 2.3e-136 490.0 520 52.7
Glyma.15G011700 Glycine max HOM05D004705 ORTHO05D005595 4.0e-136 489.2 513 51.9
Lj3g0018532 Lotus japonicus HOM05D004705 ORTHO05D005595 1.5e-135 487.3 494 54.9
Prupe.3G077300 Prunus persica HOM05D004705 ORTHO05D005595 1.5e-135 487.3 463 56.4
Duzib160G0698 Durio zibethinus HOM05D004705 ORTHO05D005595 3.4e-135 486.1 431 60.3
FvH4_6g30700 Fragaria vesca HOM05D004705 ORTHO05D005595 5.7e-135 485.3 511 54.4
FAN14G4493 Fragaria x ananassa HOM05D004705 ORTHO05D005595 5.7e-135 485.3 511 54.4
Potri.003G058600 Populus trichocarpa HOM05D004705 ORTHO05D005595 7.5e-135 485.0 496 55.4
Nitab4.5_0004817g0040 Nicotiana tabacum HOM05D004705 ORTHO05D005595 2.2e-134 483.4 454 57.5
MD17G1201400 Malus domestica HOM05D004705 ORTHO05D005595 2.8e-134 483.0 497 53.5
Duzib235G0494 Durio zibethinus HOM05D004705 ORTHO05D005595 3.7e-134 482.6 475 56.4
MELO3C012944.2 Cucumis melo HOM05D004705 ORTHO05D005595 1.4e-133 480.7 476 54.6
CsaV3_3G026670 Cucumis sativus L. HOM05D004705 ORTHO05D005595 1.8e-133 480.3 476 54.6
Lalb_Chr24g0395661 Lupinus albus HOM05D004705 ORTHO05D005595 5.4e-133 478.8 523 51.1
Atru.chr1.3167 Acer truncatum HOM05D004705 ORTHO05D005595 7.0e-133 478.4 498 53.6
CSS0020826 Camellia sinensis var. sinensis HOM05D004705 ORTHO05D005595 9.2e-133 478.0 464 56.2
Potri.001G175500 Populus trichocarpa HOM05D004705 ORTHO05D005595 9.2e-133 478.0 483 55.9
RcHm_v2.0_Chr2g0137071 Rosa chinensis HOM05D004705 ORTHO05D005595 9.2e-133 478.0 465 56.1
Ciclev10024977m.g Citrus clementina HOM05D004705 ORTHO05D005595 4.5e-132 475.7 493 53.3
FAN05G0816 Fragaria x ananassa HOM05D004705 ORTHO05D005595 4.5e-132 475.7 511 53.4
FAN09G0848 Fragaria x ananassa HOM05D004705 ORTHO05D005595 4.5e-132 475.7 511 53.6
Sed0012410 Sechium edule HOM05D004705 ORTHO05D005595 4.5e-132 475.7 503 51.9
RhsimUnG0009400 Rhododendron simsii HOM05D004705 ORTHO05D005595 5.9e-132 475.3 503 53.7
FAN02G3197 Fragaria x ananassa HOM05D004705 ORTHO05D005595 7.8e-132 474.9 511 53.4
CSS0001459 Camellia sinensis var. sinensis HOM05D004705 ORTHO05D005595 1.7e-131 473.8 524 52.1
Lalb_Chr22g0351091 Lupinus albus HOM05D004705 ORTHO05D005595 1.7e-131 473.8 504 51.8
Manes.11G049500 Manihot esculenta HOM05D004705 ORTHO05D005595 1.7e-131 473.8 489 53.6
ECA247G3649 Erigeron canadensis HOM05D004705 ORTHO05D005595 5.0e-131 472.2 519 51.8
Rhsim12G0195000 Rhododendron simsii HOM05D004705 ORTHO05D005595 3.3e-130 469.5 503 53.3
Oeu000022.1 Olea europaea HOM05D004705 ORTHO05D005595 5.6e-130 468.8 427 59.0
QL05p026953 Quercus lobata HOM05D004705 ORTHO05D005595 5.6e-130 468.8 503 51.7
HanXRQChr02g0032571 Helianthus annuus HOM05D004705 ORTHO05D005595 7.3e-130 468.4 514 51.2
Ca_01096_v3 Cicer arietinum L. HOM05D004705 ORTHO05D005595 1.6e-129 467.2 462 55.2
Phvul.005G173800 Phaseolus vulgaris HOM05D004705 ORTHO05D005595 2.1e-129 466.8 462 54.3
CANSAT56G4120 Cannabis sativa HOM05D004705 ORTHO05D005595 1.0e-128 464.5 458 56.3
Nitab4.5_0000410g0340 Nicotiana tabacum HOM05D004705 ORTHO05D005595 1.0e-128 464.5 454 55.7
TAR626G1984 Trochodendron aralioides HOM05D004705 ORTHO05D005595 8.9e-128 461.5 492 53.9
EL10Ac9g21966 Beta vulgaris HOM05D004705 ORTHO05D005595 1.2e-127 461.1 486 54.5
AUR62016408 Chenopodium quinoa HOM05D004705 ORTHO05D005595 1.2e-127 461.1 478 54.4
Medtr2g102680 Medicago truncatula HOM05D004705 ORTHO05D005595 1.2e-127 461.1 527 49.9
TPR.G37249 Trifolium pratense HOM05D004705 ORTHO05D005595 1.2e-127 461.1 488 52.9
MSTRG.17159 Avicennia marina HOM05D004705 ORTHO05D005595 3.4e-127 459.5 516 51.7
PGR031G3493 Punica granatum HOM05D004705 ORTHO05D005595 4.4e-127 459.1 450 56.0
Lj5A66T57 Lonicera japonica HOM05D004705 ORTHO05D005595 9.8e-127 458.0 517 51.3
Psat5g299960 Pisum sativum HOM05D004705 ORTHO05D005595 2.2e-126 456.8 506 50.6
AUR62011594 Chenopodium quinoa HOM05D004705 ORTHO05D005595 2.9e-126 456.4 498 52.8
Lsat_1_v5_gn_1_33801 Lactuca sativa HOM05D004705 ORTHO05D005595 1.1e-125 454.5 512 49.8
Nn8g39334 Nelumbo nucifera HOM05D004705 ORTHO05D005595 1.9e-125 453.8 478 52.1
Cfa002032 Carpinus fangiana HOM05D004705 ORTHO05D005595 9.2e-125 451.4 521 50.3
THA.LOC104818041 Tarenaya hassleriana HOM05D004705 ORTHO05D005595 1.7e-123 447.2 435 55.6
Glyma.13G362100 Glycine max HOM05D004705 ORTHO05D005595 2.3e-123 446.8 513 49.7
MBI04_g43364_MAGBIO Magnolia biondii HOM05D004705 ORTHO05D005595 3.0e-123 446.4 496 51.6
BraA01t03898Z Brassica rapa HOM05D004705 ORTHO05D005595 3.9e-123 446.0 474 51.9
Haze_16487 Corylus avellana HOM05D004705 ORTHO05D005595 3.9e-123 446.0 520 49.2
Aqoxy7G01953 Aquilegia oxysepala HOM05D004705 ORTHO05D005595 5.0e-123 445.7 478 52.1
DCAR_025463 Daucus carota HOM05D004705 ORTHO05D005595 6.6e-123 445.3 422 56.6
A01p38480 Brassica napus HOM05D004705 ORTHO05D005595 4.3e-122 442.6 474 51.7
arahy.Tifrunner.gnm1.ann1.1G4SNU Arachis hypogaea HOM05D004705 ORTHO05D005595 7.3e-122 441.8 484 51.7
BraA05t22205Z Brassica rapa HOM05D004705 ORTHO05D005595 2.8e-121 439.9 423 55.8
Carub.0003s1530 Capsella rubella HOM05D004705 ORTHO05D005595 2.8e-121 439.9 422 56.2
A05p33830 Brassica napus HOM05D004705 ORTHO05D005595 3.6e-121 439.5 476 52.1
Aa31LG8G2800 Aethionema arabicum HOM05D004705 ORTHO05D005595 8.0e-121 438.3 482 51.0
Thhalv10020202m.g Eutrema salsugineum HOM05D004705 ORTHO05D005595 8.0e-121 438.3 423 56.3
BcaC05g28954 Brassica carinata HOM05D004705 ORTHO05D005595 1.1e-120 438.0 489 49.5
Sp3g13840 Schrenkiella parvula HOM05D004705 ORTHO05D005595 1.1e-120 438.0 481 50.7
Hund00574 Selenicereus undatus HOM05D004705 ORTHO05D005595 1.4e-120 437.6 418 57.4
C05p51460 Brassica napus HOM05D004705 ORTHO05D005595 1.8e-120 437.2 488 49.6
BcaC09g48528 Brassica carinata HOM05D004705 ORTHO05D005595 5.2e-120 435.6 474 51.3
CiPaw.01G242500 Carya illinoinensis HOM05D004705 ORTHO05D005595 5.2e-120 435.6 468 51.5
CARHR090640 Cardamine hirsuta HOM05D004705 ORTHO05D005595 8.9e-120 434.9 421 55.3
Dinv30551 Davidia involucrata HOM05D004705 ORTHO05D005595 1.2e-119 434.5 554 47.7
PSO170G5959 Papaver somniferum HOM05D004705 ORTHO05D005595 2.6e-119 433.3 496 49.6
BolC1t04836H Brassica oleracea HOM05D004705 ORTHO05D005595 3.4e-119 433.0 474 51.1
BolC5t33833H Brassica oleracea HOM05D004705 ORTHO05D005595 4.4e-119 432.6 421 55.6
C01p48810 Brassica napus HOM05D004705 ORTHO05D005595 5.8e-119 432.2 474 51.1
AT3G15550 Arabidopsis thaliana HOM05D004705 ORTHO05D005595 9.8e-119 431.4 481 50.5
PSO017G1026 Papaver somniferum HOM05D004705 ORTHO05D005595 9.8e-119 431.4 493 49.1
AL3G28180 Arabidopsis lyrata HOM05D004705 ORTHO05D005595 1.3e-118 431.0 481 50.5
Lalb_Chr25g0279551 Lupinus albus HOM05D004705 ORTHO05D005595 1.3e-118 431.0 511 49.7
TWI75G0140 Tripterygium wilfordii HOM05D004705 ORTHO05D005595 1.3e-118 431.0 489 50.9
BcaB06g29595 Brassica carinata HOM05D004705 ORTHO05D005595 4.9e-118 429.1 475 50.9
TAR383G1056 Trochodendron aralioides HOM05D004705 ORTHO05D005595 6.4e-118 428.7 512 49.2
arahy.Tifrunner.gnm1.ann1.WXP04W Arachis hypogaea HOM05D004705 ORTHO05D005595 1.9e-117 427.2 517 48.4
Eucgr.J03029 Eucalyptus grandis HOM05D004705 ORTHO05D005595 2.1e-116 423.7 479 50.9
VMungo1080G1183 Vigna mungo HOM05D004705 ORTHO05D005595 3.0e-115 419.9 431 53.1
Nn2g11880 Nelumbo nucifera HOM05D004705 ORTHO05D005595 7.3e-114 415.2 429 52.9
Sabra01G0137000 Salix brachista HOM05D004705 ORTHO05D005595 8.1e-113 411.8 484 49.8
arahy.Tifrunner.gnm1.ann1.HFN88V Arachis hypogaea HOM05D004705 ORTHO05D005595 1.4e-112 411.0 502 48.2
Os01g0176500 Oryza sativa ssp. japonica HOM05D004705 ORTHO05D005595 3.1e-112 409.8 491 48.7
Zm00001eb122560 Zea mays HOM05D004705 ORTHO05D005595 6.8e-112 408.7 464 51.1
BcaB04g20914 Brassica carinata HOM05D004705 ORTHO05D005595 1.2e-111 407.9 475 48.6
COL.COLO4_12857 Corchorus olitorius HOM05D004705 ORTHO05D005595 4.9e-110 402.5 469 50.5
Cpa.g.c32383.1 Carica papaya HOM05D004705 ORTHO05D005595 1.3e-107 394.4 372 58.6
Sc12g0008970 Simmondsia chinensis HOM05D004705 ORTHO05D005595 2.3e-107 393.7 423 53.4
CDE01G0719 Ceratophyllum demersum HOM05D004705 ORTHO05D005595 8.6e-107 391.7 421 49.9
Migut.B01589 Erythranthe guttata HOM05D004705 ORTHO05D005595 8.6e-107 391.7 360 58.6
ATR0083G057 Amborella trichopoda HOM05D004705 ORTHO05D005595 1.2e-105 387.9 506 45.5
THA.LOC104812485 Tarenaya hassleriana HOM05D004705 ORTHO05D005595 8.4e-102 375.2 439 46.5
arahy.Tifrunner.gnm1.ann1.AD4PBH Arachis hypogaea HOM05D004705 ORTHO05D005595 7.3e-98 362.1 502 44.2
SEGI_27484 Sequoiadendron giganteum HOM05D004705 ORTHO05D005595 8.7e-91 338.6 441 45.1
SEGI_13982 Sequoiadendron giganteum HOM05D004705 ORTHO05D005595 8.7e-83 312.0 439 42.6
MBI01_g15493_MAGBIO Magnolia biondii HOM05D004705 ORTHO05D005595 5.6e-74 282.7 458 41.0
Pp3c23_2990 Physcomitrium patens HOM05D004705 ORTHO05D005595 2.5e-69 267.3 445 38.2
AagrBONN_evm.TU.Sc2ySwM_228.3613 Anthoceros agrestis HOM05D004705 ORTHO05D005595 1.2e-68 265.0 448 39.3
Pp3c8_15560 Physcomitrium patens HOM05D004705 ORTHO05D005595 9.7e-66 255.4 526 35.0
Ah.01g021140 Amaranthus hybridus HOM05D004705 ORTHO05D005595 1.3e-65 255.0 497 37.4
Pp3c20_1400 Physcomitrium patens HOM05D004705 ORTHO05D005595 1.4e-64 251.5 489 34.4
Pp3c20_1403 Physcomitrium patens HOM05D004705 ORTHO05D005595 1.4e-64 251.5 489 34.4
Pp3c23_18290 Physcomitrium patens HOM05D004705 ORTHO05D005595 1.4e-64 251.5 411 36.5
Pp3c13_19170 Physcomitrium patens HOM05D004705 ORTHO05D005595 1.2e-63 248.4 458 38.0
CDE02G1329 Ceratophyllum demersum HOM05D004705 ORTHO05D005595 8.5e-62 242.3 417 37.4
Pp3c8_22450 Physcomitrium patens HOM05D004705 ORTHO05D005595 1.8e-59 234.6 448 35.3
Actinidia16007 Actinidia chinensis HOM05D004705 ORTHO05D005595 7.7e-55 219.2 317 41.6
Pp3c24_17130 Physcomitrium patens HOM05D004705 ORTHO05D005595 6.5e-54 216.1 459 33.6
Lj8C335T16 Lonicera japonica HOM05D004705 ORTHO05D005595 4.7e-52 209.9 393 37.9
MBI04_g47892_MAGBIO Magnolia biondii HOM05D004705 ORTHO05D005595 1.1e-42 178.7 221 52.0
SHI09686 Sapria himalayana HOM05D004705 ORTHO05D005595 6.7e-35 152.9 369 34.4
SMO147G0411 Selaginella moellendorffii HOM05D004705 ORTHO05D005595 1.5e-34 151.8 154 48.7
Actinidia08822 Actinidia chinensis HOM05D004705 ORTHO05D005595 6.1e-28 129.8 205 42.4
Medtr1g107505 Medicago truncatula HOM05D004705 ORTHO05D005595 5.7e-18 96.7 72 62.5
MBI04_g47893_MAGBIO Magnolia biondii HOM05D004705 ORTHO05D005595 1.1e-16 92.4 201 31.8
BcaC09g48527 Brassica carinata HOM05D004705 ORTHO05D005595 4.5e-15 87.0 58 62.1
Medtr1g041460 Medicago truncatula HOM05D004705 ORTHO05D005595 4.6e-07 60.5 50 54.0


User provided reference genes

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