Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_61.g26362 Utricularia gibba HOM05D007963 ORTHO05D009967 4.5e-58 227.6 110 100.0
MSTRG.20574 Avicennia marina HOM05D007963 ORTHO05D009967 4.1e-27 124.8 119 57.1
SalBow5G1437 Salvia bowleyana HOM05D007963 ORTHO05D009967 2.5e-24 115.5 112 52.7
SalBow5G4167 Salvia bowleyana HOM05D007963 ORTHO05D009967 2.5e-24 115.5 112 52.7
Nn2g15279 Nelumbo nucifera HOM05D007963 ORTHO05D009967 1.5e-21 106.3 123 48.0
MBI04_g34432_MAGBIO Magnolia biondii HOM05D007963 ORTHO05D009967 1.7e-20 102.8 119 50.4
Migut.B01286 Erythranthe guttata HOM05D007963 ORTHO05D009967 3.8e-20 101.7 117 46.2
TAR369G0233 Trochodendron aralioides HOM05D007963 ORTHO05D009967 8.4e-20 100.5 118 50.0
FvH4_5g32100 Fragaria vesca HOM05D007963 ORTHO05D009967 5.4e-19 97.8 125 51.2
RcHm_v2.0_Chr7g0228141 Rosa chinensis HOM05D007963 ORTHO05D009967 5.4e-19 97.8 91 57.1
MD02G1308200 Malus domestica HOM05D007963 ORTHO05D009967 7.1e-19 97.4 95 54.7
PGSC0003DMG400023738 Solanum tuberosum HOM05D007963 ORTHO05D009967 7.1e-19 97.4 90 56.7
SGA_v2.0_scaffold4G02518 Striga asiatica HOM05D007963 ORTHO05D009967 2.7e-18 95.5 107 47.7
vmacro13678 Vaccinium macrocarpon HOM05D007963 ORTHO05D009967 3.5e-18 95.1 107 48.6
Prupe.2G017200 Prunus persica HOM05D007963 ORTHO05D009967 4.6e-18 94.7 96 54.2
Sopen10g031160 Solanum pennellii HOM05D007963 ORTHO05D009967 4.6e-18 94.7 56 80.4
HanXRQChr01g0016481 Helianthus annuus HOM05D007963 ORTHO05D009967 1.3e-17 93.2 90 52.2
DCAR_003219 Daucus carota HOM05D007963 ORTHO05D009967 2.3e-17 92.4 68 67.6
Rhsim07G0056600 Rhododendron simsii HOM05D007963 ORTHO05D009967 2.3e-17 92.4 66 65.2
Thecc.01G408600 Theobroma cacao HOM05D007963 ORTHO05D009967 3.0e-17 92.0 100 48.0
Eucgr.J01210 Eucalyptus grandis HOM05D007963 ORTHO05D009967 3.9e-17 91.7 56 73.2
CiPaw.13G006800 Carya illinoinensis HOM05D007963 ORTHO05D009967 5.1e-17 91.3 100 49.0
Haze_03176 Corylus avellana HOM05D007963 ORTHO05D009967 6.6e-17 90.9 121 47.1
Lsat_1_v5_gn_1_105740 Lactuca sativa HOM05D007963 ORTHO05D009967 1.1e-16 90.1 49 79.6
EL10Ac2g04344 Beta vulgaris HOM05D002263 ORTHO05D003537 1.9e-16 89.4 58 70.7
Cfa010795 Carpinus fangiana HOM05D007963 ORTHO05D009967 3.3e-16 88.6 103 52.4
Duzib133G0999 Durio zibethinus HOM05D007963 ORTHO05D009967 4.3e-16 88.2 100 46.0
Potri.009G059100 Populus trichocarpa HOM05D007963 ORTHO05D009967 4.3e-16 88.2 50 74.0
CSS0005909 Camellia sinensis var. sinensis HOM05D007963 ORTHO05D009967 7.3e-16 87.4 82 53.7
Gohir.A08G143400 Gossypium hirsutum HOM05D007963 ORTHO05D009967 7.3e-16 87.4 58 69.0
Gohir.D08G164400 Gossypium hirsutum HOM05D007963 ORTHO05D009967 7.3e-16 87.4 58 69.0
Gorai.004G171400 Gossypium raimondii HOM05D007963 ORTHO05D009967 7.3e-16 87.4 58 69.0
CiPaw.14G001400 Carya illinoinensis HOM05D007963 ORTHO05D009967 9.6e-16 87.0 104 46.2
COL.COLO4_04871 Corchorus olitorius HOM05D007963 ORTHO05D009967 9.6e-16 87.0 93 48.4
QL04p008099 Quercus lobata HOM05D007963 ORTHO05D009967 1.2e-15 86.7 105 43.8
QL04p008549 Quercus lobata HOM05D007963 ORTHO05D009967 1.2e-15 86.7 105 43.8
TWI09G0461 Tripterygium wilfordii HOM05D007963 ORTHO05D009967 1.2e-15 86.7 57 70.2
Zm00001eb400040 Zea mays HOM05D007963 ORTHO05D009967 1.2e-15 86.7 54 70.4
Hma1.2p1_2160F.1_g315600 Hydrangea macrophylla HOM05D007963 ORTHO05D009967 1.6e-15 86.3 50 74.0
Sed0018324 Sechium edule HOM05D007963 ORTHO05D009967 1.6e-15 86.3 106 48.1
Atru.chr11.2601 Acer truncatum HOM05D007963 ORTHO05D009967 4.7e-15 84.7 99 48.5
Os03g0217000 Oryza sativa ssp. japonica HOM05D007963 ORTHO05D009967 4.7e-15 84.7 48 75.0
ClCG10G012280 Citrullus lanatus HOM05D007963 ORTHO05D009967 1.4e-14 83.2 102 46.1
Lj3g0025556 Lotus japonicus HOM05D007963 ORTHO05D009967 1.4e-14 83.2 48 77.1
Sc23g0005920 Simmondsia chinensis HOM05D007963 ORTHO05D009967 1.4e-14 83.2 58 62.1
CsaV3_3G032070 Cucumis sativus L. HOM05D007963 ORTHO05D009967 1.8e-14 82.8 104 49.0
Sed0005364 Sechium edule HOM05D007963 ORTHO05D009967 1.8e-14 82.8 101 47.5
MELO3C023985.2 Cucumis melo HOM05D007963 ORTHO05D009967 2.4e-14 82.4 96 50.0
Ciclev10033085m.g Citrus clementina HOM05D007963 ORTHO05D009967 4.0e-14 81.6 56 69.6
Manes.07G007300 Manihot esculenta HOM05D007963 ORTHO05D009967 5.2e-14 81.3 66 62.1
AUR62009397 Chenopodium quinoa HOM05D007963 ORTHO05D009967 6.9e-14 80.9 82 51.2
VMungo1127G0040 Vigna mungo HOM05D007963 ORTHO05D009967 1.2e-13 80.1 113 41.6
A04p07310 Brassica napus HOM05D007963 ORTHO05D009967 1.5e-13 79.7 89 48.3
BraA04t16426Z Brassica rapa HOM05D007963 ORTHO05D009967 1.5e-13 79.7 89 48.3
Glyma.12G008400 Glycine max HOM05D007963 ORTHO05D009967 2.6e-13 79.0 119 43.7
Lalb_Chr20g0107921 Lupinus albus HOM05D007963 ORTHO05D009967 2.6e-13 79.0 84 52.4
Medtr4g039540 Medicago truncatula HOM05D007963 ORTHO05D009967 3.4e-13 78.6 52 71.2
Phvul.011G012801 Phaseolus vulgaris HOM05D007963 ORTHO05D009967 5.8e-13 77.8 47 76.6
BcaB01g00449 Brassica carinata HOM05D007963 ORTHO05D009967 7.6e-13 77.4 89 44.9
C08p27320 Brassica napus HOM05D007963 ORTHO05D009967 7.6e-13 77.4 89 44.9
A09p45130 Brassica napus HOM05D007963 ORTHO05D009967 9.9e-13 77.0 89 44.9
BraA09t39974Z Brassica rapa HOM05D007963 ORTHO05D009967 9.9e-13 77.0 89 44.9
BcaC02g09285 Brassica carinata HOM05D007963 ORTHO05D009967 1.3e-12 76.6 90 47.8
CARHR161770 Cardamine hirsuta HOM05D007963 ORTHO05D009967 1.3e-12 76.6 91 49.5
Thhalv10010836m.g Eutrema salsugineum HOM05D007963 ORTHO05D009967 2.2e-12 75.9 89 46.1
BolC8t50349H Brassica oleracea HOM05D007963 ORTHO05D009967 3.8e-12 75.1 89 43.8
BcaNung06964 Brassica carinata HOM05D007963 ORTHO05D009967 4.9e-12 74.7 85 44.7
AL5G32620 Arabidopsis lyrata HOM05D007963 ORTHO05D009967 1.9e-11 72.8 91 49.5
BcaB02g08592 Brassica carinata HOM05D007963 ORTHO05D009967 2.4e-11 72.4 84 44.0
AT3G52070 Arabidopsis thaliana HOM05D007963 ORTHO05D009967 1.2e-10 70.1 84 51.2
Carub.0005s1839 Capsella rubella HOM05D007963 ORTHO05D009967 1.6e-10 69.7 93 45.2
Sabra09G0043500 Salix brachista HOM05D007963 ORTHO05D009967 2.7e-10 68.9 88 42.0
BcaNung06087 Brassica carinata HOM05D007963 ORTHO05D009967 7.8e-10 67.4 48 66.7
Cpa.g.sc125.16 Carica papaya HOM05D007963 ORTHO05D009967 1.7e-09 66.2 85 48.2
ATR0332G088 Amborella trichopoda HOM05D007963 ORTHO05D009967 5.1e-09 64.7 54 53.7
C04p40920 Brassica napus HOM05D007963 ORTHO05D009967 8.7e-09 63.9 74 48.6
SEGI_13442 Sequoiadendron giganteum HOM05D007963 ORTHO05D009967 4.3e-08 61.6 38 68.4
SEGI_37070 Sequoiadendron giganteum HOM05D007963 ORTHO05D009967 4.3e-08 61.6 38 68.4
Aa31LG10G7140 Aethionema arabicum HOM05D007963 ORTHO05D009967 3.1e-06 55.5 44 56.8
AagrBONN_evm.TU.Sc2ySwM_228.4962 Anthoceros agrestis HOM05D025110 ORTHO05D009967 5.3e-06 54.7 34 67.6


User provided reference genes

Program Settings