Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_61.g26353 Utricularia gibba HOM05D006805 ORTHO05D008656 9.3e-206 719.9 352 100.0
Migut.H02510 Erythranthe guttata HOM05D006805 ORTHO05D008656 5.4e-121 438.3 415 54.9
MSTRG.2490 Avicennia marina HOM05D006805 ORTHO05D008656 1.6e-120 436.8 402 57.0
CAN.G358.30 Capsicum annuum HOM05D006805 ORTHO05D008656 1.6e-112 410.2 400 53.2
Potri.007G019400 Populus trichocarpa HOM05D006805 ORTHO05D008656 1.6e-112 410.2 396 52.0
CSS0042312 Camellia sinensis var. sinensis HOM05D006805 ORTHO05D008656 6.0e-112 408.3 398 53.3
CiPaw.08G138000 Carya illinoinensis HOM05D006805 ORTHO05D008656 4.3e-110 402.1 389 52.2
Peaxi162Scf00418g00926 Petunia axillaris HOM05D006805 ORTHO05D008656 4.3e-110 402.1 393 52.9
SGA_v2.0_scaffold51G18803 Striga asiatica HOM05D006805 ORTHO05D008656 1.1e-108 397.5 476 48.1
Sabra07G0016600 Salix brachista HOM05D006805 ORTHO05D008656 3.1e-108 396.0 416 49.5
QL06p035053 Quercus lobata HOM05D006805 ORTHO05D008656 9.0e-108 394.4 393 51.4
Solyc02g084810.3 Solanum lycopersicum HOM05D006805 ORTHO05D008656 9.0e-108 394.4 400 51.2
Cfa006913 Carpinus fangiana HOM05D006805 ORTHO05D008656 2.0e-107 393.3 397 50.6
Cc07_g10060 Coffea canephora HOM05D006805 ORTHO05D008656 2.0e-107 393.3 395 50.6
Sopen02g029480 Solanum pennellii HOM05D006805 ORTHO05D008656 2.0e-107 393.3 400 51.0
Haze_03843 Corylus avellana HOM05D006805 ORTHO05D008656 7.6e-107 391.3 309 60.2
AUR62007618 Chenopodium quinoa HOM05D006805 ORTHO05D008656 9.9e-107 391.0 308 60.7
TWI73G0963 Tripterygium wilfordii HOM05D006805 ORTHO05D008656 1.7e-106 390.2 397 50.1
vmacro17722 Vaccinium macrocarpon HOM05D006805 ORTHO05D008656 2.2e-106 389.8 303 60.7
Hund16454 Selenicereus undatus HOM05D006805 ORTHO05D008656 2.9e-106 389.4 382 52.4
Nn1g05800 Nelumbo nucifera HOM05D006805 ORTHO05D008656 3.8e-106 389.0 397 49.9
Rhsim08G0122900 Rhododendron simsii HOM05D006805 ORTHO05D008656 6.4e-106 388.3 396 51.0
Atru.chr3.728 Acer truncatum HOM05D006805 ORTHO05D008656 1.9e-105 386.7 400 50.5
GSVIVG01018866001 Vitis vinifera HOM05D006805 ORTHO05D008656 1.9e-105 386.7 397 51.1
Duzib264G1030 Durio zibethinus HOM05D006805 ORTHO05D008656 2.4e-105 386.3 386 52.1
CANSAT01G1867 Cannabis sativa HOM05D006805 ORTHO05D008656 3.2e-105 386.0 402 49.8
TAR381G0553 Trochodendron aralioides HOM05D006805 ORTHO05D008656 3.2e-105 386.0 397 49.9
Prupe.7G161800 Prunus persica HOM05D006805 ORTHO05D008656 4.2e-105 385.6 318 59.1
DCAR_025973 Daucus carota HOM05D006805 ORTHO05D008656 5.4e-105 385.2 379 52.0
Dinv40030 Davidia involucrata HOM05D006805 ORTHO05D008656 5.4e-105 385.2 431 47.3
Thecc.01G027300 Theobroma cacao HOM05D006805 ORTHO05D008656 7.1e-105 384.8 396 51.0
FvH4_1g12510 Fragaria vesca HOM05D006805 ORTHO05D008656 4.6e-104 382.1 303 58.4
RcHm_v2.0_Chr2g0100411 Rosa chinensis HOM05D006805 ORTHO05D008656 3.0e-103 379.4 398 48.2
Hma1.2p1_0913F.1_g235930 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 3.9e-103 379.0 399 49.6
MD15G1252400 Malus domestica HOM05D006805 ORTHO05D008656 3.9e-103 379.0 305 58.7
THA.LOC104804245 Tarenaya hassleriana HOM05D006805 ORTHO05D008656 3.9e-103 379.0 400 50.5
Manes.01G140000 Manihot esculenta HOM05D006805 ORTHO05D008656 5.1e-103 378.6 396 49.2
Ciclev10025725m.g Citrus clementina HOM05D006805 ORTHO05D008656 8.7e-103 377.9 352 53.1
Duzib147G1209 Durio zibethinus HOM05D006805 ORTHO05D008656 8.7e-103 377.9 392 49.0
COL.COLO4_22005 Corchorus olitorius HOM05D006805 ORTHO05D008656 1.1e-102 377.5 353 52.7
Gorai.003G012500 Gossypium raimondii HOM05D006805 ORTHO05D008656 5.6e-102 375.2 398 48.5
PSO731G0058 Papaver somniferum HOM05D006805 ORTHO05D008656 5.6e-102 375.2 401 47.9
Gohir.D03G012200 Gossypium hirsutum HOM05D006805 ORTHO05D008656 9.6e-102 374.4 398 48.5
FAN19G2522 Fragaria x ananassa HOM05D006805 ORTHO05D008656 2.8e-101 372.9 309 57.0
AL7G14650 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 6.2e-101 371.7 382 49.7
Sed0012409 Sechium edule HOM05D006805 ORTHO05D008656 6.2e-101 371.7 398 47.2
Eucgr.J02381 Eucalyptus grandis HOM05D006805 ORTHO05D008656 8.1e-101 371.3 395 47.8
Gohir.A02G167800 Gossypium hirsutum HOM05D006805 ORTHO05D008656 8.1e-101 371.3 398 48.2
C01p02610 Brassica napus HOM05D006805 ORTHO05D008656 3.1e-100 369.4 390 48.2
Nitab4.5_0004708g0010 Nicotiana tabacum HOM05D006805 ORTHO05D008656 4.0e-100 369.0 386 50.5
arahy.Tifrunner.gnm1.ann1.FKKR7E Arachis hypogaea HOM05D006805 ORTHO05D008656 5.3e-100 368.6 373 47.2
BcaNung05308 Brassica carinata HOM05D000394 ORTHO05D000299 5.3e-100 368.6 319 56.4
ECA238G0382 Erigeron canadensis HOM05D006805 ORTHO05D008656 5.3e-100 368.6 351 50.7
HanXRQChr14g0441241 Helianthus annuus HOM05D006805 ORTHO05D008656 5.3e-100 368.6 362 49.4
Psat4g096160 Pisum sativum HOM05D006805 ORTHO05D008656 5.3e-100 368.6 302 56.6
VMungo0251G3732 Vigna mungo HOM05D006805 ORTHO05D008656 5.3e-100 368.6 317 55.2
AT4G36440 Arabidopsis thaliana HOM05D006805 ORTHO05D008656 1.2e-99 367.5 371 50.4
BcaNung00732 Brassica carinata HOM05D006805 ORTHO05D008656 1.5e-99 367.1 390 47.9
BolC1t00250H Brassica oleracea HOM05D006805 ORTHO05D008656 2.0e-99 366.7 398 47.7
CsaV3_6G046700 Cucumis sativus L. HOM05D006805 ORTHO05D008656 2.0e-99 366.7 398 47.5
Glyma.02G052900 Glycine max HOM05D006805 ORTHO05D008656 2.0e-99 366.7 386 47.9
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 2.6e-99 366.3 407 47.7
Thhalv10025347m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 7.6e-99 364.8 395 47.8
BraA01t00229Z Brassica rapa HOM05D006805 ORTHO05D008656 9.9e-99 364.4 319 54.9
Phvul.003G257300 Phaseolus vulgaris HOM05D006805 ORTHO05D008656 1.3e-98 364.0 404 45.5
arahy.Tifrunner.gnm1.ann1.P9L48X Arachis hypogaea HOM05D006805 ORTHO05D008656 1.7e-98 363.6 304 54.9
Aqoxy5G01548 Aquilegia oxysepala HOM05D006805 ORTHO05D008656 2.2e-98 363.2 304 57.9
A01p02400 Brassica napus HOM05D000394 ORTHO05D008656 2.2e-98 363.2 304 55.9
Sp7g34100 Schrenkiella parvula HOM05D006805 ORTHO05D008656 2.2e-98 363.2 383 48.6
Medtr8g076840 Medicago truncatula HOM05D006805 ORTHO05D008656 4.9e-98 362.1 292 57.2
Lj4g0018076 Lotus japonicus HOM05D006805 ORTHO05D008656 6.4e-98 361.7 403 45.9
Nitab4.5_0000723g0180 Nicotiana tabacum HOM05D006805 ORTHO05D008656 6.4e-98 361.7 366 54.9
PGR102G0609 Punica granatum HOM05D006805 ORTHO05D008656 8.4e-98 361.3 404 46.3
Carub.0007s0387 Capsella rubella HOM05D006805 ORTHO05D008656 2.4e-97 359.8 375 47.2
Thhalv10000178m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 3.2e-97 359.4 394 47.5
CARHR244770 Cardamine hirsuta HOM05D006805 ORTHO05D008656 9.3e-97 357.8 412 45.4
MELO3C007867.2 Cucumis melo HOM05D006805 ORTHO05D008656 1.6e-96 357.1 425 44.0
Lalb_Chr16g0391011 Lupinus albus HOM05D006805 ORTHO05D008656 2.1e-96 356.7 288 55.6
Hma1.2p1_0913F.1_g235940 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 5.1e-95 352.1 290 59.7
HPP92_008328 Vanilla planifolia HOM05D006805 ORTHO05D008656 2.5e-94 349.7 289 55.4
CDE06G0805 Ceratophyllum demersum HOM05D006805 ORTHO05D008656 1.3e-93 347.4 326 52.8
SalBow8G5631 Salvia bowleyana HOM05D006805 ORTHO05D008656 4.8e-93 345.5 429 45.5
ATR1154G040 Amborella trichopoda HOM05D006805 ORTHO05D008656 2.5e-89 333.2 306 52.9
Ca_22341_v3 Cicer arietinum L. HOM05D006805 ORTHO05D008656 2.3e-87 326.6 383 45.2
AUR62004104 Chenopodium quinoa HOM05D006805 ORTHO05D008656 3.9e-87 325.9 248 62.9
FAN23G0481 Fragaria x ananassa HOM05D006805 ORTHO05D008656 6.7e-87 325.1 303 52.1
Lj4C209T2 Lonicera japonica HOM05D006805 ORTHO05D008656 9.0e-84 314.7 253 61.7
EL10As8g23891 Beta vulgaris HOM05D006805 ORTHO05D008656 1.3e-82 310.8 209 66.5
Sc03g0003200 Simmondsia chinensis HOM05D006805 ORTHO05D004508 1.9e-81 307.0 248 60.5
Hma1.2p1_2955F.1_g330740 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 4.6e-80 302.4 340 45.9
MBI16_g23836_MAGBIO Magnolia biondii HOM05D006805 ORTHO05D008656 5.0e-74 282.3 230 57.0
AagrBONN_evm.TU.Sc2ySwM_228.1023 Anthoceros agrestis HOM05D006805 ORTHO05D001783 4.8e-69 265.8 317 46.1
Aa31LG6G13250 Aethionema arabicum HOM05D006805 ORTHO05D008656 1.8e-68 263.8 306 45.4
SGA_v2.0_scaffold7G03543 Striga asiatica HOM05D006805 ORTHO05D003527 1.8e-68 263.8 195 68.2
Sc03g0003190 Simmondsia chinensis HOM05D006805 ORTHO05D008656 2.9e-66 256.5 225 58.2
Pp3c9_15730 Physcomitrium patens HOM05D006805 ORTHO05D008656 2.5e-65 253.4 313 42.5
FAN26G3258 Fragaria x ananassa HOM05D006805 ORTHO05D008656 3.9e-63 246.1 304 43.8
Pp3c15_5920 Physcomitrium patens HOM05D006805 ORTHO05D008656 3.9e-63 246.1 310 41.9
SMO141G0060 Selaginella moellendorffii HOM05D006805 ORTHO05D008656 2.2e-61 240.4 354 37.0
Mapoly0033s0048 Marchantia polymorpha HOM05D006805 ORTHO05D008656 3.7e-61 239.6 315 41.3
HanXRQChr12g0370271 Helianthus annuus HOM05D006805 ORTHO05D008656 8.2e-53 211.8 212 47.6
Lsat_1_v5_gn_2_78040 Lactuca sativa HOM05D006805 ORTHO05D008656 7.7e-51 205.3 173 57.2
arahy.Tifrunner.gnm1.ann1.CY3TH7 Arachis hypogaea HOM05D006805 ORTHO05D008656 5.4e-44 182.6 282 36.2
Dinv10224 Davidia involucrata HOM05D006805 ORTHO05D008656 2.0e-43 180.6 137 61.3
HanXRQChr09g0256121 Helianthus annuus HOM05D006805 ORTHO05D008656 1.7e-37 161.0 137 56.9
TPR.G21539 Trifolium pratense HOM05D000894 ORTHO05D001833 2.3e-34 150.6 127 55.1
Glyma.16G133100 Glycine max HOM05D006805 ORTHO05D008656 6.6e-34 149.1 104 59.6
EL10Ac7g17413 Beta vulgaris HOM05D006805 ORTHO05D008656 1.7e-29 134.4 136 51.5
TPR.G21535 Trifolium pratense HOM05D006805 ORTHO05D008656 2.4e-28 130.6 178 37.6
Zm00001eb128340 Zea mays HOM05D006805 ORTHO05D008656 1.3e-26 124.8 102 55.9
HanXRQChr16g0499431 Helianthus annuus HOM05D006805 ORTHO05D008656 1.7e-26 124.4 249 33.3
Glyma.10G129950 Glycine max HOM05D006805 ORTHO05D008656 1.1e-25 121.7 110 50.0
AL6G38800 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 2.0e-22 110.9 91 59.3
Cpa.g.sc6.179 Carica papaya HOM05D006805 ORTHO05D008656 2.6e-22 110.5 390 26.4
MD02G1139100 Malus domestica HOM05D006805 ORTHO05D008656 8.3e-21 105.5 103 51.5
Lj2g0002148 Lotus japonicus HOM05D006805 ORTHO05D008656 1.9e-12 77.8 51 62.7
RcHm_v2.0_Chr2g0136281 Rosa chinensis HOM05D006805 ORTHO05D008656 3.1e-07 60.5 41 63.4


User provided reference genes

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