Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_61.g26224 Utricularia gibba HOM05D005199 ORTHO05D006277 5.3e-152 541.2 312 100.0
unitig_0.g1099 Utricularia gibba HOM05D005199 ORTHO05D006277 1.1e-144 516.9 313 87.9
GSVIVG01008655001 Vitis vinifera HOM05D005199 ORTHO05D006277 2.3e-123 446.0 313 86.3
Sabra15G0129500 Salix brachista HOM05D005199 ORTHO05D006277 1.3e-121 440.3 314 73.6
Sabra15G0127400 Salix brachista HOM05D005199 ORTHO05D006277 2.8e-121 439.1 314 73.2
Potri.015G106900 Populus trichocarpa HOM05D005199 ORTHO05D006277 1.4e-120 436.8 315 72.7
TWI39G0590 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 1.5e-119 433.3 292 83.9
Medtr3g098560 Medicago truncatula HOM05D005199 ORTHO05D006277 3.4e-119 432.2 313 83.4
ECA232G4131 Erigeron canadensis HOM05D005199 ORTHO05D006277 4.5e-119 431.8 308 70.8
Ciclev10033942m.g Citrus clementina HOM05D005199 ORTHO05D006277 3.8e-118 428.7 292 73.6
Manes.06G127100 Manihot esculenta HOM05D005199 ORTHO05D006277 1.1e-117 427.2 292 83.2
SGA_v2.0_scaffold37G14675 Striga asiatica HOM05D005199 ORTHO05D006277 1.9e-117 426.4 294 86.1
Ca_10877_v3 Cicer arietinum L. HOM05D005199 ORTHO05D006277 2.5e-117 426.0 313 82.4
SalBow7G2845 Salvia bowleyana HOM05D005199 ORTHO05D006277 2.5e-117 426.0 313 82.7
Cc04_g05820 Coffea canephora HOM05D005199 ORTHO05D006277 3.2e-117 425.6 297 75.8
Psat5g056040 Pisum sativum HOM05D005199 ORTHO05D006277 3.2e-117 425.6 293 86.3
CiPaw.12G000800 Carya illinoinensis HOM05D005199 ORTHO05D006277 2.1e-116 422.9 312 74.7
CSS0050347 Camellia sinensis var. sinensis HOM05D005199 ORTHO05D006277 4.6e-116 421.8 289 86.9
HanXRQChr09g0273821 Helianthus annuus HOM05D005199 ORTHO05D006277 6.7e-115 417.9 320 71.6
Dinv13715 Davidia involucrata HOM05D005199 ORTHO05D006277 8.8e-115 417.5 293 85.7
Hma1.2p1_0577F.1_g182220 Hydrangea macrophylla HOM05D005199 ORTHO05D006277 1.1e-114 417.2 291 85.9
Haze_07093 Corylus avellana HOM05D005199 ORTHO05D006277 1.5e-114 416.8 313 81.5
QL10p000401 Quercus lobata HOM05D005199 ORTHO05D006277 1.5e-114 416.8 312 73.4
Cfa018703 Carpinus fangiana HOM05D005199 ORTHO05D006277 5.7e-114 414.8 313 70.6
Nn3g16267 Nelumbo nucifera HOM05D005199 ORTHO05D006277 2.2e-113 412.9 291 84.2
Thecc.03G141200 Theobroma cacao HOM05D005199 ORTHO05D006277 2.8e-113 412.5 292 76.4
CAN.G843.7 Capsicum annuum HOM05D005199 ORTHO05D006277 6.3e-113 411.4 307 81.8
Manes.14G044200 Manihot esculenta HOM05D005199 ORTHO05D006277 8.2e-113 411.0 292 80.5
Duzib205G1536 Durio zibethinus HOM05D005199 ORTHO05D006277 1.4e-112 410.2 292 74.0
MD14G1146700 Malus domestica HOM05D005199 ORTHO05D006277 2.4e-112 409.5 302 79.5
Rhsim08G0198200 Rhododendron simsii HOM05D005199 ORTHO05D006277 3.1e-112 409.1 314 72.3
Actinidia25514 Actinidia chinensis HOM05D005199 ORTHO05D006277 1.5e-111 406.8 291 81.1
MD06G1129500 Malus domestica HOM05D005199 ORTHO05D006277 3.4e-111 405.6 300 71.3
Lj1g0022547 Lotus japonicus HOM05D005199 ORTHO05D006277 4.5e-111 405.2 294 83.7
Migut.I00669 Erythranthe guttata HOM05D005199 ORTHO05D006277 7.7e-111 404.4 300 82.7
vmacro19190 Vaccinium macrocarpon HOM05D005199 ORTHO05D006277 7.7e-111 404.4 311 80.4
VMungo1309G0841 Vigna mungo HOM05D005199 ORTHO05D006277 1.0e-110 404.1 297 83.2
CDE02G3820 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 2.9e-110 402.5 294 69.0
CDE06G1181 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 2.9e-110 402.5 294 68.7
SHI14097 Sapria himalayana HOM05D005199 ORTHO05D006277 2.9e-110 402.5 336 62.2
Atru.chr6.1926 Acer truncatum HOM05D005199 ORTHO05D006277 8.5e-110 401.0 291 82.1
Prupe.5G140700 Prunus persica HOM05D005199 ORTHO05D006277 3.2e-109 399.1 305 68.5
Gohir.A07G046500 Gossypium hirsutum HOM05D005199 ORTHO05D006277 5.5e-109 398.3 298 80.9
Peaxi162Scf00314g00633 Petunia axillaris HOM05D005199 ORTHO05D006277 9.4e-109 397.5 318 77.4
Oeu013661.1 Olea europaea HOM05D005199 ORTHO05D006277 1.6e-108 396.7 309 79.9
TAR374G0192 Trochodendron aralioides HOM05D005199 ORTHO05D006277 1.6e-108 396.7 289 82.0
Dinv23231 Davidia involucrata HOM05D005199 ORTHO05D006277 2.7e-108 396.0 311 80.1
Nitab4.5_0011600g0020 Nicotiana tabacum HOM05D005199 ORTHO05D006277 3.6e-108 395.6 298 77.5
TWI14G0958 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 2.3e-107 392.9 296 78.7
Sopen03g037080 Solanum pennellii HOM05D005199 ORTHO05D006277 5.2e-107 391.7 295 82.4
Glyma.06G163600 Glycine max HOM05D005199 ORTHO05D006277 2.6e-106 389.4 298 71.8
Nitab4.5_0000976g0090 Nicotiana tabacum HOM05D005199 ORTHO05D006277 2.6e-106 389.4 307 75.6
FAN04G2629 Fragaria x ananassa HOM05D005199 ORTHO05D006277 9.7e-106 387.5 299 74.2
RcHm_v2.0_Chr7g0188591 Rosa chinensis HOM05D005199 ORTHO05D006277 6.3e-105 384.8 300 75.0
FAN13G0330 Fragaria x ananassa HOM05D005199 ORTHO05D006277 8.2e-105 384.4 299 73.9
Phvul.009G160900 Phaseolus vulgaris HOM05D005199 ORTHO05D006277 1.1e-104 384.0 297 80.1
EL10Ac5g11279 Beta vulgaris HOM05D005199 ORTHO05D006277 1.4e-104 383.6 365 66.3
FAN18G4150 Fragaria x ananassa HOM05D005199 ORTHO05D006277 3.1e-104 382.5 299 73.6
Duzib084G1266 Durio zibethinus HOM05D005199 ORTHO05D006277 2.6e-103 379.4 292 70.5
DCAR_025645 Daucus carota HOM05D005199 ORTHO05D006277 3.5e-103 379.0 308 68.5
FAN08G3145 Fragaria x ananassa HOM05D005199 ORTHO05D006277 3.5e-103 379.0 300 73.7
Cpa.g.sc13.181 Carica papaya HOM05D005199 ORTHO05D006277 5.0e-102 375.2 312 64.4
COL.COLO4_37264 Corchorus olitorius HOM05D005199 ORTHO05D006277 5.0e-102 375.2 274 81.8
Ah.02g114560 Amaranthus hybridus HOM05D005199 ORTHO05D006277 1.1e-101 374.0 344 58.4
THA.LOC104818285 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 1.1e-101 374.0 302 69.5
PGR102G3000 Punica granatum HOM05D005199 ORTHO05D006277 1.5e-101 373.6 290 76.2
Lsat_1_v5_gn_4_84380 Lactuca sativa HOM05D005199 ORTHO05D006277 1.9e-101 373.2 300 70.7
DCAR_016338 Daucus carota HOM05D005199 ORTHO05D006277 3.2e-101 372.5 295 66.4
MBI10_g44970_MAGBIO Magnolia biondii HOM05D005199 ORTHO05D006277 5.5e-101 371.7 294 77.6
arahy.Tifrunner.gnm1.ann1.4TKD14 Arachis hypogaea HOM05D005199 ORTHO05D006277 7.2e-101 371.3 303 74.9
BcaC01g02441 Brassica carinata HOM05D005199 ORTHO05D006277 1.2e-100 370.5 306 71.6
ClCG06G018380 Citrullus lanatus HOM05D005199 ORTHO05D006277 1.2e-100 370.5 295 75.6
THA.LOC104801769 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 1.2e-100 370.5 300 66.7
Eucgr.K02192 Eucalyptus grandis HOM05D005199 ORTHO05D006277 6.1e-100 368.2 290 70.0
BcaB07g29818 Brassica carinata HOM05D005199 ORTHO05D006277 1.0e-99 367.5 319 73.0
MELO3C026157.2 Cucumis melo HOM05D005199 ORTHO05D006277 1.8e-99 366.7 295 75.3
Gohir.D07G050800 Gossypium hirsutum HOM05D005199 ORTHO05D006277 5.2e-99 365.2 298 73.2
Gorai.001G053900 Gossypium raimondii HOM05D005199 ORTHO05D006277 5.2e-99 365.2 298 76.5
C03p65260 Brassica napus HOM05D005199 ORTHO05D006277 6.7e-99 364.8 310 70.6
BolC3t18779H Brassica oleracea HOM05D005199 ORTHO05D006277 6.7e-99 364.8 310 70.6
A06p28520 Brassica napus HOM05D005199 ORTHO05D006277 1.5e-98 363.6 310 70.6
BraA06t25798Z Brassica rapa HOM05D005199 ORTHO05D006277 1.5e-98 363.6 310 70.6
Aa31LG11G1640 Aethionema arabicum HOM05D005199 ORTHO05D006277 2.0e-98 363.2 302 67.5
BcaB02g09607 Brassica carinata HOM05D005199 ORTHO05D006277 2.6e-98 362.8 303 73.3
CsaV3_1G000050 Cucumis sativus L. HOM05D005199 ORTHO05D006277 2.6e-98 362.8 295 74.9
Sp2g25050 Schrenkiella parvula HOM05D005199 ORTHO05D006277 3.3e-98 362.5 314 69.1
BcaC03g18101 Brassica carinata HOM05D005199 ORTHO05D006277 5.7e-98 361.7 317 72.9
A02p41740 Brassica napus HOM05D005199 ORTHO05D006277 5.7e-98 361.7 317 72.9
C02p61660 Brassica napus HOM05D005199 ORTHO05D006277 5.7e-98 361.7 317 72.9
Thhalv10005606m.g Eutrema salsugineum HOM05D005199 ORTHO05D006277 1.7e-97 360.1 300 70.0
AUR62032216 Chenopodium quinoa HOM05D005199 ORTHO05D006277 2.2e-97 359.8 301 63.1
arahy.Tifrunner.gnm1.ann1.P6GRAY Arachis hypogaea HOM05D005199 ORTHO05D006277 6.3e-97 358.2 304 66.1
PSO478G1920 Papaver somniferum HOM05D005199 ORTHO05D006277 1.8e-96 356.7 294 75.9
Carub.0008s2255 Capsella rubella HOM05D005199 ORTHO05D006277 2.4e-96 356.3 319 69.9
BolC2t12224H Brassica oleracea HOM05D005199 ORTHO05D006277 3.1e-96 355.9 321 72.0
BraA02t09114Z Brassica rapa HOM05D005199 ORTHO05D006277 3.1e-96 355.9 321 72.0
CARHR275620 Cardamine hirsuta HOM05D005199 ORTHO05D006277 9.1e-96 354.4 300 74.3
AT5G61850 Arabidopsis thaliana HOM05D005199 ORTHO05D006277 2.7e-95 352.8 309 66.7
AL8G38620 Arabidopsis lyrata HOM05D005199 ORTHO05D006277 1.5e-93 347.1 309 71.5
FAN11G0489 Fragaria x ananassa HOM05D005199 ORTHO05D006277 3.2e-93 345.9 299 69.2
Sc22g0003300 Simmondsia chinensis HOM05D005199 ORTHO05D006277 3.2e-93 345.9 321 64.8
FvH4_3g04170 Fragaria vesca HOM05D005199 ORTHO05D006277 5.5e-93 345.1 323 69.3
FvH4_3g03530 Fragaria vesca HOM05D005199 ORTHO05D006277 2.7e-92 342.8 299 69.9
FAN11G0779 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.7e-92 342.8 321 69.2
Lj9A487G53 Lonicera japonica HOM05D005199 ORTHO05D006277 3.6e-92 342.4 277 66.1
Aqoxy5G03105 Aquilegia oxysepala HOM05D005199 ORTHO05D006277 1.4e-91 340.5 301 69.1
Sed0007314 Sechium edule HOM05D005199 ORTHO05D006277 2.3e-91 339.7 294 61.9
FAN21G1800 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.5e-90 337.0 299 67.6
arahy.Tifrunner.gnm1.ann1.33WSUR Arachis hypogaea HOM05D005199 ORTHO05D006277 9.8e-90 334.3 292 66.1
FAN25G0693 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.4e-88 329.7 337 63.8
SGA_v2.0_scaffold168G38552 Striga asiatica HOM05D005199 ORTHO05D006277 4.1e-88 328.9 294 60.2
ATR0582G251 Amborella trichopoda HOM05D005199 ORTHO05D006277 5.4e-88 328.6 322 61.8
arahy.Tifrunner.gnm1.ann1.31D2RV Arachis hypogaea HOM05D005199 ORTHO05D006277 7.0e-88 328.2 289 64.0
TPR.G25958 Trifolium pratense HOM05D005199 ORTHO05D006277 9.1e-88 327.8 242 80.6
Zm00001eb430240 Zea mays HOM05D005199 ORTHO05D006277 2.8e-84 316.2 306 61.1
Lalb_Chr11g0069151 Lupinus albus HOM05D005199 ORTHO05D006277 3.6e-84 315.8 166 87.3
Os04g0598300 Oryza sativa ssp. japonica HOM05D005199 ORTHO05D006277 5.2e-83 312.0 305 63.9
Migut.D01179 Erythranthe guttata HOM05D005199 ORTHO05D006277 3.4e-82 309.3 161 87.6
SEGI_00497 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 3.0e-75 286.2 307 50.5
Zm00001eb071990 Zea mays HOM05D005199 ORTHO05D006277 1.5e-74 283.9 288 60.1
Mapoly0113s0034 Marchantia polymorpha HOM05D005199 ORTHO05D006277 4.4e-74 282.3 300 50.3
SEGI_03714 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 2.4e-72 276.6 290 52.4
AUR62044212 Chenopodium quinoa HOM05D005199 ORTHO05D006277 2.7e-71 273.1 301 52.5
AUR62043310 Chenopodium quinoa HOM05D005199 ORTHO05D006277 7.8e-71 271.6 301 51.8
Pp3c13_8760 Physcomitrium patens HOM05D005199 ORTHO05D006277 1.1e-69 267.7 290 50.3
Pp3c3_11670 Physcomitrium patens HOM05D005199 ORTHO05D006277 3.3e-69 266.2 290 50.7
HPP92_021614 Vanilla planifolia HOM05D005199 ORTHO05D006277 1.1e-61 241.1 254 59.1
Glyma.04G202002 Glycine max HOM05D005199 ORTHO05D006277 2.5e-61 240.0 123 87.8
PGSC0003DMG400014174 Solanum tuberosum HOM05D005199 ORTHO05D006277 1.0e-54 218.0 107 93.5
Lalb_Chr07g0183831 Lupinus albus HOM05D005199 ORTHO05D006277 3.1e-51 206.5 104 88.5
Lalb_Chr12g0202561 Lupinus albus HOM05D005199 ORTHO05D006277 2.9e-49 199.9 190 80.0
Lalb_Chr07g0183841 Lupinus albus HOM05D005199 ORTHO05D006277 7.1e-48 195.3 195 72.3
FvH4_5g09660 Fragaria vesca HOM05D005199 ORTHO05D006277 1.0e-46 191.4 193 68.4
SMO347G0183 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 1.1e-45 188.0 113 72.6
FAN25G1078 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.1e-43 181.4 254 55.9
Lalb_Chr12g0202551 Lupinus albus HOM05D005199 ORTHO05D006277 5.4e-40 169.1 106 76.4
CBR_g60061 Chara braunii HOM05D005199 ORTHO05D006277 2.8e-36 156.8 129 58.1
Sabra15G0071900 Salix brachista HOM05D005199 ORTHO05D006277 1.5e-34 151.0 189 52.9
Actinidia18295 Actinidia chinensis HOM05D005199 ORTHO05D006277 1.1e-24 118.2 68 89.7
AagrBONN_evm.TU.Sc2ySwM_228.2166 Anthoceros agrestis HOM05D005199 ORTHO05D006277 5.1e-22 109.4 218 36.2
CDE05G0289 Ceratophyllum demersum HOM05D000263 ORTHO05D000213 5.3e-19 99.4 121 46.3
Lalb_Chr11g0069141 Lupinus albus HOM05D005199 ORTHO05D006277 6.7e-14 82.4 60 73.3


User provided reference genes

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