Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_61.g26092 Utricularia gibba HOM05D003856 ORTHO05D004547 8.1e-146 520.4 263 100.0
SalBow8G1854 Salvia bowleyana HOM05D003856 ORTHO05D004547 5.3e-121 438.0 263 85.2
Migut.M01400 Erythranthe guttata HOM05D003856 ORTHO05D004547 2.6e-120 435.6 261 85.4
SalBow1G0666 Salvia bowleyana HOM05D003856 ORTHO05D004547 4.5e-120 434.9 263 85.2
Aqoxy1G04060 Aquilegia oxysepala HOM05D003856 ORTHO05D004547 1.7e-119 433.0 260 84.6
Hma1.2p1_0657F.1_g197110 Hydrangea macrophylla HOM05D003856 ORTHO05D004547 1.7e-119 433.0 261 84.3
TAR627G0499 Trochodendron aralioides HOM05D003856 ORTHO05D004547 1.7e-119 433.0 261 84.7
TAR627G1166 Trochodendron aralioides HOM05D003856 ORTHO05D004547 1.7e-119 433.0 261 84.7
PGR004G0563 Punica granatum HOM05D003856 ORTHO05D004547 2.9e-119 432.2 260 85.4
Dinv07408 Davidia involucrata HOM05D003856 ORTHO05D004547 8.4e-119 430.6 263 84.0
SGA_v2.0_scaffold4G01871 Striga asiatica HOM05D003856 ORTHO05D004547 1.1e-118 430.3 262 83.6
Nitab4.5_0004406g0030 Nicotiana tabacum HOM05D003856 ORTHO05D004547 1.4e-118 429.9 260 84.6
Atru.chr1.2436 Acer truncatum HOM05D003856 ORTHO05D004547 3.2e-118 428.7 261 85.1
Atru.chr1.2438 Acer truncatum HOM05D003856 ORTHO05D004547 3.2e-118 428.7 261 85.1
Actinidia02310 Actinidia chinensis HOM05D003856 ORTHO05D004547 7.1e-118 427.6 261 83.9
Nn1g07399 Nelumbo nucifera HOM05D003856 ORTHO05D004547 7.1e-118 427.6 260 85.4
MSTRG.7166 Avicennia marina HOM05D003856 ORTHO05D004547 9.3e-118 427.2 260 84.6
Haze_06930 Corylus avellana HOM05D003856 ORTHO05D004547 9.3e-118 427.2 261 83.5
Actinidia26855 Actinidia chinensis HOM05D003856 ORTHO05D004547 1.2e-117 426.8 261 84.3
ECA248G1273 Erigeron canadensis HOM05D003856 ORTHO05D004547 1.2e-117 426.8 261 82.8
QL05p069616 Quercus lobata HOM05D003856 ORTHO05D004547 1.2e-117 426.8 261 83.1
TWI38G2230 Tripterygium wilfordii HOM05D003856 ORTHO05D004547 1.2e-117 426.8 262 83.6
Potri.016G013100 Populus trichocarpa HOM05D003856 ORTHO05D004547 2.1e-117 426.0 261 83.1
Thecc.06G233900 Theobroma cacao HOM05D003856 ORTHO05D004547 2.1e-117 426.0 260 84.2
Ciclev10016420m.g Citrus clementina HOM05D003856 ORTHO05D004547 2.7e-117 425.6 260 85.0
FvH4_3g00930 Fragaria vesca HOM05D003856 ORTHO05D004547 2.7e-117 425.6 262 82.4
Lsat_1_v5_gn_4_61900 Lactuca sativa HOM05D003856 ORTHO05D004547 2.7e-117 425.6 261 82.8
MBI16_g31714_MAGBIO Magnolia biondii HOM05D003856 ORTHO05D004547 2.7e-117 425.6 261 83.5
Cfa010272 Carpinus fangiana HOM05D003856 ORTHO05D004547 3.5e-117 425.2 261 83.1
Eucgr.D01412 Eucalyptus grandis HOM05D003856 ORTHO05D004547 3.5e-117 425.2 260 83.5
FAN25G1896 Fragaria x ananassa HOM05D003856 ORTHO05D004547 3.5e-117 425.2 260 83.1
Lj2A261T38 Lonicera japonica HOM05D003856 ORTHO05D004547 3.5e-117 425.2 261 83.5
Cc09_g00840 Coffea canephora HOM05D003856 ORTHO05D004547 4.6e-117 424.9 262 84.4
HanXRQChr01g0006771 Helianthus annuus HOM05D003856 ORTHO05D004547 4.6e-117 424.9 263 82.5
Potri.006G011500 Populus trichocarpa HOM05D003856 ORTHO05D004547 4.6e-117 424.9 261 83.1
BcaB03g11729 Brassica carinata HOM05D003856 ORTHO05D004547 6.0e-117 424.5 260 83.1
RcHm_v2.0_Chr5g0001451 Rosa chinensis HOM05D003856 ORTHO05D004547 6.0e-117 424.5 260 83.5
TAR626G0303 Trochodendron aralioides HOM05D003856 ORTHO05D004547 7.9e-117 424.1 260 83.1
C03p84130 Brassica napus HOM05D003856 ORTHO05D004547 1.0e-116 423.7 260 83.1
BolC3t20692H Brassica oleracea HOM05D003856 ORTHO05D004547 1.0e-116 423.7 260 83.1
CiPaw.10G078300 Carya illinoinensis HOM05D003856 ORTHO05D004547 1.3e-116 423.3 257 83.7
CsaV3_1G017260 Cucumis sativus L. HOM05D003856 ORTHO05D004547 1.8e-116 422.9 261 82.4
BcaC01g00774 Brassica carinata HOM05D003856 ORTHO05D004547 2.3e-116 422.5 260 82.7
A08p15680 Brassica napus HOM05D003856 ORTHO05D004547 2.3e-116 422.5 260 82.7
CiPaw.09G102800 Carya illinoinensis HOM05D003856 ORTHO05D004547 2.3e-116 422.5 257 83.7
HanXRQChr10g0285161 Helianthus annuus HOM05D003856 ORTHO05D004547 2.3e-116 422.5 263 81.0
Sc17g0007760 Simmondsia chinensis HOM05D003856 ORTHO05D004547 2.3e-116 422.5 260 83.5
AT4G12590 Arabidopsis thaliana HOM05D003856 ORTHO05D004547 3.0e-116 422.2 260 82.3
ClCG01G010160 Citrullus lanatus HOM05D003856 ORTHO05D004547 3.0e-116 422.2 261 82.0
Manes.08G069500 Manihot esculenta HOM05D003856 ORTHO05D004547 3.0e-116 422.2 261 82.8
Cpa.g.sc75.112 Carica papaya HOM05D003856 ORTHO05D004547 3.9e-116 421.8 261 82.4
Ca_10008_v3 Cicer arietinum L. HOM05D003856 ORTHO05D004547 3.9e-116 421.8 261 80.5
TWI63G1684 Tripterygium wilfordii HOM05D003856 ORTHO05D004547 3.9e-116 421.8 291 77.0
Duzib192G0794 Durio zibethinus HOM05D003856 ORTHO05D004547 5.1e-116 421.4 260 83.1
THA.LOC104812995 Tarenaya hassleriana HOM05D003856 ORTHO05D004547 5.1e-116 421.4 261 82.8
AL7G31210 Arabidopsis lyrata HOM05D003856 ORTHO05D004547 6.7e-116 421.0 260 82.7
BraA08t33548Z Brassica rapa HOM05D003856 ORTHO05D004547 6.7e-116 421.0 260 82.3
CSS0032798 Camellia sinensis var. sinensis HOM05D003856 ORTHO05D004547 6.7e-116 421.0 261 82.0
Lsat_1_v5_gn_0_29081 Lactuca sativa HOM05D003856 ORTHO05D004547 6.7e-116 421.0 257 82.9
Hund06997 Selenicereus undatus HOM05D003856 ORTHO05D004547 6.7e-116 421.0 260 83.1
AL6G47550 Arabidopsis lyrata HOM05D003856 ORTHO05D004547 8.7e-116 420.6 260 81.9
CANSAT56G3590 Cannabis sativa HOM05D003856 ORTHO05D004547 8.7e-116 420.6 260 81.9
C01p16660 Brassica napus HOM05D003856 ORTHO05D004547 1.1e-115 420.2 260 81.9
Gohir.D10G008800 Gossypium hirsutum HOM05D003856 ORTHO05D004547 1.1e-115 420.2 261 83.1
Gorai.011G009600 Gossypium raimondii HOM05D003856 ORTHO05D004547 1.1e-115 420.2 261 83.1
EL10Ac8g20193 Beta vulgaris HOM05D003856 ORTHO05D004547 1.5e-115 419.9 263 81.4
A09p26760 Brassica napus HOM05D003856 ORTHO05D004547 1.5e-115 419.9 260 81.9
C09p33910 Brassica napus HOM05D003856 ORTHO05D004547 1.5e-115 419.9 260 81.9
BolC9t56227H Brassica oleracea HOM05D003856 ORTHO05D004547 1.5e-115 419.9 260 81.9
BraA09t38248Z Brassica rapa HOM05D003856 ORTHO05D004547 1.5e-115 419.9 260 81.9
Sopen05g032590 Solanum pennellii HOM05D003856 ORTHO05D004547 1.5e-115 419.9 261 83.1
PGSC0003DMG400008443 Solanum tuberosum HOM05D003856 ORTHO05D004547 1.5e-115 419.9 261 83.1
BolC1t01613H Brassica oleracea HOM05D003856 ORTHO05D004547 1.9e-115 419.5 260 81.9
CAN.G449.18 Capsicum annuum HOM05D003856 ORTHO05D004547 1.9e-115 419.5 261 83.1
Duzib235G1167 Durio zibethinus HOM05D003856 ORTHO05D004547 1.9e-115 419.5 260 83.5
Gohir.A10G009100 Gossypium hirsutum HOM05D003856 ORTHO05D004547 1.9e-115 419.5 261 83.1
A01p13750 Brassica napus HOM05D003856 ORTHO05D004547 2.5e-115 419.1 260 81.9
BraA01t01320Z Brassica rapa HOM05D003856 ORTHO05D004547 2.5e-115 419.1 260 81.9
CDE04G3203 Ceratophyllum demersum HOM05D003856 ORTHO05D004547 2.5e-115 419.1 260 82.3
CDE06G2351 Ceratophyllum demersum HOM05D003856 ORTHO05D004547 2.5e-115 419.1 260 81.9
DCAR_004889 Daucus carota HOM05D003856 ORTHO05D004547 2.5e-115 419.1 260 82.7
FAN21G0260 Fragaria x ananassa HOM05D003856 ORTHO05D004547 2.5e-115 419.1 265 81.5
MD05G1358200 Malus domestica HOM05D003856 ORTHO05D004547 2.5e-115 419.1 259 82.6
MD10G1332300 Malus domestica HOM05D003856 ORTHO05D004547 2.5e-115 419.1 259 82.6
Gohir.D10G008700 Gossypium hirsutum HOM05D003856 ORTHO05D004547 3.3e-115 418.7 261 82.4
Gorai.011G009500 Gossypium raimondii HOM05D003856 ORTHO05D004547 3.3e-115 418.7 261 82.4
Thhalv10026090m.g Eutrema salsugineum HOM05D003856 ORTHO05D004547 4.3e-115 418.3 260 82.3
Lj5g0025471 Lotus japonicus HOM05D003856 ORTHO05D004547 4.3e-115 418.3 261 81.2
Prupe.4G009900 Prunus persica HOM05D003856 ORTHO05D004547 4.3e-115 418.3 259 82.6
Sed0026067 Sechium edule HOM05D003856 ORTHO05D004547 4.3e-115 418.3 261 81.6
BcaC04g21245 Brassica carinata HOM05D003856 ORTHO05D004547 5.7e-115 417.9 260 81.5
Gohir.A10G009000 Gossypium hirsutum HOM05D003856 ORTHO05D004547 7.4e-115 417.5 261 82.0
Carub.0006s3186 Capsella rubella HOM05D003856 ORTHO05D004547 9.6e-115 417.2 260 81.2
Solyc05g054100.3 Solanum lycopersicum HOM05D003856 ORTHO05D004547 9.6e-115 417.2 261 82.8
THA.LOC104813601 Tarenaya hassleriana HOM05D003856 ORTHO05D004547 9.6e-115 417.2 260 82.3
Aa31LG9G10060 Aethionema arabicum HOM05D003856 ORTHO05D004547 1.3e-114 416.8 260 81.5
arahy.Tifrunner.gnm1.ann1.B5Z1I8 Arachis hypogaea HOM05D003856 ORTHO05D004547 1.3e-114 416.8 261 80.8
arahy.Tifrunner.gnm1.ann1.ZZ9Q5Y Arachis hypogaea HOM05D003856 ORTHO05D004547 1.3e-114 416.8 261 80.8
BcaB01g01755 Brassica carinata HOM05D003856 ORTHO05D004547 1.3e-114 416.8 260 81.5
Oeu009395.1 Olea europaea HOM05D003856 ORTHO05D004547 1.3e-114 416.8 306 74.8
Rhsim02G0099500 Rhododendron simsii HOM05D003856 ORTHO05D004547 1.3e-114 416.8 285 76.8
Sed0028227 Sechium edule HOM05D003856 ORTHO05D004547 1.6e-114 416.4 261 80.8
arahy.Tifrunner.gnm1.ann1.D1JSNC Arachis hypogaea HOM05D003856 ORTHO05D004547 2.1e-114 416.0 261 80.5
Glyma.08G331200 Glycine max HOM05D003856 ORTHO05D004547 2.1e-114 416.0 261 80.5
arahy.Tifrunner.gnm1.ann1.GCV40F Arachis hypogaea HOM05D003856 ORTHO05D004547 2.8e-114 415.6 261 80.1
Sp7g20520 Schrenkiella parvula HOM05D003856 ORTHO05D004547 3.7e-114 415.2 260 81.2
Glyma.18G075400 Glycine max HOM05D003856 ORTHO05D004547 6.3e-114 414.5 261 80.1
Nn1g03306 Nelumbo nucifera HOM05D003856 ORTHO05D004547 8.2e-114 414.1 250 85.6
Psat6g143120 Pisum sativum HOM05D003856 ORTHO05D004547 8.2e-114 414.1 261 78.9
Medtr1g079890 Medicago truncatula HOM05D003856 ORTHO05D004547 1.1e-113 413.7 261 78.9
Ah.14g087610 Amaranthus hybridus HOM05D003856 ORTHO05D004547 2.4e-113 412.5 263 79.8
CARHR229320 Cardamine hirsuta HOM05D003856 ORTHO05D004547 4.1e-113 411.8 261 81.2
Sp6g04920 Schrenkiella parvula HOM05D003856 ORTHO05D004547 4.1e-113 411.8 260 80.8
VMungo0540G0895 Vigna mungo HOM05D003856 ORTHO05D004547 4.1e-113 411.8 261 79.3
CARHR253580 Cardamine hirsuta HOM05D003856 ORTHO05D004547 6.9e-113 411.0 260 80.8
BcaC09g51102 Brassica carinata HOM05D003856 ORTHO05D004547 9.0e-113 410.6 261 80.8
Lalb_Chr02g0149201 Lupinus albus HOM05D003856 ORTHO05D004547 1.2e-112 410.2 261 79.7
Nitab4.5_0001735g0170 Nicotiana tabacum HOM05D003856 ORTHO05D004547 1.2e-112 410.2 261 82.0
Phvul.006G059000 Phaseolus vulgaris HOM05D003856 ORTHO05D004547 1.5e-112 409.8 261 79.3
Thhalv10028913m.g Eutrema salsugineum HOM05D003856 ORTHO05D004547 2.0e-112 409.5 260 80.8
TPR.G32278 Trifolium pratense HOM05D003856 ORTHO05D004547 3.4e-112 408.7 261 78.9
Lalb_Chr06g0168331 Lupinus albus HOM05D003856 ORTHO05D004547 4.5e-112 408.3 260 79.2
DCAR_027821 Daucus carota HOM05D003856 ORTHO05D004547 5.9e-112 407.9 300 73.0
PSO541G3298 Papaver somniferum HOM05D003856 ORTHO05D004547 1.3e-111 406.8 262 80.5
Zm00001eb102120 Zea mays HOM05D003856 ORTHO05D004547 2.2e-111 406.0 266 78.2
PSO675G7111 Papaver somniferum HOM05D003856 ORTHO05D004547 3.8e-111 405.2 262 80.2
Peaxi162Scf00990g00017 Petunia axillaris HOM05D003856 ORTHO05D004547 9.3e-110 400.6 261 80.5
Mapoly0029s0061 Marchantia polymorpha HOM05D003856 ORTHO05D004547 2.3e-108 396.0 265 75.5
AagrBONN_evm.TU.Sc2ySwM_362.305 Anthoceros agrestis HOM05D003856 ORTHO05D004547 5.7e-107 391.3 258 76.4
Os09g0497400 Oryza sativa ssp. japonica HOM05D003856 ORTHO05D004547 1.4e-105 386.7 266 73.7
Pp3c11_24600 Physcomitrium patens HOM05D003856 ORTHO05D004547 2.4e-105 386.0 265 72.8
Sabra06G0009100 Salix brachista HOM05D003856 ORTHO05D004547 6.9e-105 384.4 348 62.4
SMO239G0047 Selaginella moellendorffii HOM05D003856 ORTHO05D004547 2.0e-104 382.9 266 71.4
Pp3c7_950 Physcomitrium patens HOM05D003856 ORTHO05D004547 4.5e-104 381.7 265 71.7
Haze_06937 Corylus avellana HOM05D003856 ORTHO05D004547 2.5e-102 375.9 267 74.2
Sabra16G0002300 Salix brachista HOM05D003856 ORTHO05D004547 7.2e-102 374.4 242 81.0
GSVIVG01003331001 Vitis vinifera HOM05D003856 ORTHO05D004547 5.7e-99 364.8 225 82.2
GSVIVG01003337001 Vitis vinifera HOM05D003856 ORTHO05D004547 5.7e-99 364.8 225 82.2
ATR0712G091 Amborella trichopoda HOM05D003856 ORTHO05D004547 3.7e-98 362.1 228 81.6
vmacro15762 Vaccinium macrocarpon HOM05D003856 ORTHO05D004547 1.3e-95 353.6 376 55.1
SHI24455 Sapria himalayana HOM05D003856 ORTHO05D004547 5.5e-86 321.6 262 64.9
Lj1C1240G8 Lonicera japonica HOM05D003856 ORTHO05D004547 2.1e-85 319.7 212 81.1
Nitab4.5_0003626g0020 Nicotiana tabacum HOM05D003856 ORTHO05D004547 6.7e-84 314.7 260 66.2
Gorai.013G129800 Gossypium raimondii HOM05D003856 ORTHO05D004547 8.8e-84 314.3 261 67.0
MELO3C021687.2 Cucumis melo HOM05D003856 ORTHO05D004547 1.7e-79 300.1 193 81.3
CSS0048239 Camellia sinensis var. sinensis HOM05D003856 ORTHO05D004547 1.0e-76 290.8 165 86.7
Lalb_Chr21g0311231 Lupinus albus HOM05D003856 ORTHO05D004547 3.0e-76 289.3 183 78.1
AUR62021855 Chenopodium quinoa HOM05D003856 ORTHO05D004547 2.0e-75 286.6 186 81.2
AUR62012797 Chenopodium quinoa HOM05D003856 ORTHO05D004547 4.4e-75 285.4 186 81.2
HPP92_000415 Vanilla planifolia HOM05D003856 ORTHO05D004547 1.4e-68 263.8 293 52.9
MCO07G661 Micromonas commoda HOM05D003856 ORTHO05D004547 6.0e-56 221.9 257 45.5
SEGI_40422 Sequoiadendron giganteum HOM05D003856 ORTHO05D004547 3.0e-55 219.5 152 76.3
Cre09.g400400 Chlamydomonas reinhardtii HOM05D003856 ORTHO05D004547 1.3e-47 194.1 259 42.1
Haze_26609 Corylus avellana HOM05D003856 ORTHO05D004547 2.5e-46 189.9 246 41.1
Gorai.012G047500 Gossypium raimondii HOM05D003856 ORTHO05D004547 7.5e-43 178.3 261 45.6
MD10G1332200 Malus domestica HOM05D003856 ORTHO05D004547 1.1e-41 174.5 116 78.4
SEGI_31097 Sequoiadendron giganteum HOM05D003856 ORTHO05D004547 7.1e-41 171.8 96 84.4
Carub.0007s1888 Capsella rubella HOM05D003856 ORTHO05D004547 1.7e-39 167.2 213 51.6
CSS0021523 Camellia sinensis var. sinensis HOM05D003856 ORTHO05D004547 6.4e-34 148.7 165 52.1
AL649U10020 Arabidopsis lyrata HOM05D003856 ORTHO05D004547 2.1e-29 133.7 86 80.2
Lalb_Chr21g0311241 Lupinus albus HOM05D003856 ORTHO05D004547 6.9e-28 128.6 82 76.8
COL.COLO4_31891 Corchorus olitorius HOM05D003856 ORTHO05D004547 3.4e-27 126.3 140 52.1
C01p16690 Brassica napus HOM05D003856 ORTHO05D004547 7.1e-25 118.6 85 71.8
CARHR290760 Cardamine hirsuta HOM05D003856 ORTHO05D004547 1.6e-24 117.5 101 64.4
PRCOL_00006309 Prasinoderma coloniale HOM05D003856 ORTHO05D004547 1.0e-23 114.8 243 33.3
Carub.0008s0836 Capsella rubella HOM05D003856 ORTHO05D004547 3.3e-22 109.8 136 53.7
CBR_g38137 Chara braunii HOM05D003856 ORTHO05D004547 7.6e-19 98.6 102 47.1
COL.COLO4_31890 Corchorus olitorius HOM05D003856 ORTHO05D004547 4.6e-16 89.4 53 88.7
Migut.L00276 Erythranthe guttata HOM05D003856 ORTHO05D004547 1.9e-14 84.0 64 70.3
HPP92_000455 Vanilla planifolia HOM05D003856 ORTHO05D004547 7.4e-14 82.0 51 82.4
Oeu040759.1 Olea europaea HOM05D003856 ORTHO05D004547 3.7e-13 79.7 52 84.6
vmacro04321 Vaccinium macrocarpon HOM05D004428 ORTHO05D013648 6.2e-13 79.0 74 60.8
Hund21152 Selenicereus undatus HOM05D003856 ORTHO05D004547 8.1e-13 78.6 44 81.8
vmacro16921 Vaccinium macrocarpon HOM05D000007 ORTHO05D013648 2.2e-10 70.5 106 48.1
Rhsim07G0218800 Rhododendron simsii HOM05D003856 ORTHO05D013648 3.8e-10 69.7 90 51.1
Ah.14g078790 Amaranthus hybridus HOM05D006286 ORTHO05D007741 6.4e-10 68.9 38 81.6
Dinv13969 Davidia involucrata HOM05D003856 ORTHO05D004547 1.2e-08 64.7 92 48.9
FAN07G2353 Fragaria x ananassa HOM05D003856 ORTHO05D004547 4.6e-08 62.8 44 77.3
vmacro22601 Vaccinium macrocarpon HOM05D003856 ORTHO05D426869 2.3e-07 60.5 97 45.4
Rhsim07G0218900 Rhododendron simsii HOM05D003856 ORTHO05D013648 2.5e-06 57.0 98 42.9


User provided reference genes

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