Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_60.g25872 Utricularia gibba HOM05D004744 ORTHO05D005655 1.3e-42 176.0 89 100.0
unitig_748.g7861 Utricularia gibba HOM05D004744 ORTHO05D005655 7.2e-22 107.1 59 93.2
Haze_21464 Corylus avellana HOM05D004744 ORTHO05D005655 6.3e-10 67.4 62 58.1
Peaxi162Scf00116g00915 Petunia axillaris HOM05D004744 ORTHO05D005655 1.1e-09 66.6 52 67.3
Solyc08g041780.3 Solanum lycopersicum HOM05D004744 ORTHO05D005655 3.1e-09 65.1 52 63.5
Nitab4.5_0002992g0040 Nicotiana tabacum HOM05D004744 ORTHO05D005655 9.2e-09 63.5 47 70.2
Nitab4.5_0005958g0020 Nicotiana tabacum HOM05D004744 ORTHO05D005655 9.2e-09 63.5 47 70.2
Cfa013106 Carpinus fangiana HOM05D004744 ORTHO05D005655 1.2e-08 63.2 48 66.7
QL02p020429 Quercus lobata HOM05D004744 ORTHO05D005655 1.6e-08 62.8 48 66.7
Hund06750 Selenicereus undatus HOM05D004744 ORTHO05D005655 2.0e-08 62.4 57 50.9
unitig_0.g2772 Utricularia gibba HOM05D004744 ORTHO05D005655 2.0e-08 62.4 39 84.6
Prupe.1G485900 Prunus persica HOM05D004744 ORTHO05D005655 2.7e-08 62.0 84 44.0
Oeu033353.1 Olea europaea HOM05D004744 ORTHO05D005655 3.5e-08 61.6 47 63.8
SGA_v2.0_scaffold64G21986 Striga asiatica HOM05D004744 ORTHO05D005655 3.5e-08 61.6 57 57.9
Dinv18156 Davidia involucrata HOM05D004744 ORTHO05D005655 4.5e-08 61.2 47 63.8
Sopen08g011940 Solanum pennellii HOM05D004744 ORTHO05D005655 7.8e-08 60.5 47 63.8
Atru.chr7.2497 Acer truncatum HOM05D004744 ORTHO05D005655 1.0e-07 60.1 48 60.4
CiPaw.08G008500 Carya illinoinensis HOM05D004744 ORTHO05D005655 1.3e-07 59.7 48 64.6
AUR62012029 Chenopodium quinoa HOM05D004744 ORTHO05D005655 1.3e-07 59.7 47 59.6
AUR62015365 Chenopodium quinoa HOM05D004744 ORTHO05D005655 1.3e-07 59.7 47 59.6
Lj8C731T12 Lonicera japonica HOM05D004744 ORTHO05D005655 1.7e-07 59.3 47 66.0
CSS0007985 Camellia sinensis var. sinensis HOM05D004744 ORTHO05D005655 2.9e-07 58.5 47 63.8
FAN20G1207 Fragaria x ananassa HOM05D004744 ORTHO05D005655 2.9e-07 58.5 48 56.2
FAN24G2392 Fragaria x ananassa HOM05D004744 ORTHO05D005655 2.9e-07 58.5 48 56.2
Ciclev10007726m.g Citrus clementina HOM05D004744 ORTHO05D005655 3.9e-07 58.2 64 51.6
Sc20g0001320 Simmondsia chinensis HOM05D004744 ORTHO05D005655 3.9e-07 58.2 47 59.6
TPR.G3127 Trifolium pratense HOM05D004744 ORTHO05D005655 3.9e-07 58.2 88 39.8
TAR625G1411 Trochodendron aralioides HOM05D004744 ORTHO05D005655 3.9e-07 58.2 47 63.8
DCAR_000582 Daucus carota HOM05D004744 ORTHO05D005655 5.0e-07 57.8 47 59.6
vmacro11210 Vaccinium macrocarpon HOM05D004744 ORTHO05D005655 5.0e-07 57.8 47 61.7
vmacro11211 Vaccinium macrocarpon HOM05D004744 ORTHO05D005655 5.0e-07 57.8 47 61.7
CAN.G326.4 Capsicum annuum HOM05D004744 ORTHO05D005655 6.6e-07 57.4 47 59.6
Eucgr.C01702 Eucalyptus grandis HOM05D004744 ORTHO05D005655 6.6e-07 57.4 48 56.2
Migut.A00009 Erythranthe guttata HOM05D004744 ORTHO05D005655 8.6e-07 57.0 47 61.7
FAN27G1080 Fragaria x ananassa HOM05D004744 ORTHO05D005655 8.6e-07 57.0 48 54.2
RcHm_v2.0_Chr6g0297241 Rosa chinensis HOM05D004744 ORTHO05D005655 8.6e-07 57.0 48 56.2
FvH4_2g28330 Fragaria vesca HOM05D004744 ORTHO05D005655 1.1e-06 56.6 48 54.2
Eucgr.C01625 Eucalyptus grandis HOM05D004744 ORTHO05D005655 1.5e-06 56.2 48 54.2
CAN.G435.2 Capsicum annuum HOM05D004744 ORTHO05D005655 1.9e-06 55.8 47 61.7
Nn8g39704 Nelumbo nucifera HOM05D004744 ORTHO05D005655 1.9e-06 55.8 46 60.9
TPR.G21279 Trifolium pratense HOM05D004744 ORTHO05D005655 1.9e-06 55.8 74 41.9
MSTRG.11596 Avicennia marina HOM05D004744 ORTHO05D005655 2.5e-06 55.5 47 59.6
Rhsim02G0205700 Rhododendron simsii HOM05D004744 ORTHO05D005655 2.5e-06 55.5 46 60.9
Cc08_g00230 Coffea canephora HOM05D004744 ORTHO05D005655 3.3e-06 55.1 46 63.0
DCAR_000575 Daucus carota HOM05D004744 ORTHO05D005655 3.3e-06 55.1 54 50.0
HanXRQChr01g0030631 Helianthus annuus HOM05D004744 ORTHO05D005655 3.3e-06 55.1 48 56.2
Lj1g0018058 Lotus japonicus HOM05D004744 ORTHO05D005655 3.3e-06 55.1 48 52.1
Lj1g0024423 Lotus japonicus HOM05D004744 ORTHO05D005655 4.3e-06 54.7 48 52.1
Ca_15759_v3 Cicer arietinum L. HOM05D004744 ORTHO05D005655 5.6e-06 54.3 48 56.2
MELO3C016990.2 Cucumis melo HOM05D004744 ORTHO05D005655 5.6e-06 54.3 48 54.2
CsaV3_4G036900 Cucumis sativus L. HOM05D004744 ORTHO05D005655 5.6e-06 54.3 48 54.2
Manes.03G012200 Manihot esculenta HOM05D004744 ORTHO05D005655 5.6e-06 54.3 48 52.1
PGR142G3966 Punica granatum HOM05D004744 ORTHO05D005655 5.6e-06 54.3 47 51.1
SEGI_40333 Sequoiadendron giganteum HOM05D004744 ORTHO05D005655 5.6e-06 54.3 50 58.0
Thecc.09G019800 Theobroma cacao HOM05D004744 ORTHO05D005655 7.3e-06 53.9 44 56.8
GSVIVG01035922001 Vitis vinifera HOM05D004744 ORTHO05D005655 7.3e-06 53.9 49 51.0
COL.COLO4_18910 Corchorus olitorius HOM05D004744 ORTHO05D005655 9.5e-06 53.5 46 54.3
Lsat_1_v5_gn_1_43821 Lactuca sativa HOM05D004744 ORTHO05D005655 9.5e-06 53.5 48 52.1
Sed0024238 Sechium edule HOM05D004744 ORTHO05D005655 9.5e-06 53.5 48 50.0


User provided reference genes

Program Settings