Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_60.g25819 Utricularia gibba HOM05D003691 ORTHO05D004288 0.0e+00 1187.6 583 100.0
SGA_v2.0_scaffold70G23393 Striga asiatica HOM05D003691 ORTHO05D004288 1.2e-189 667.2 661 55.5
MSTRG.14857 Avicennia marina HOM05D003691 ORTHO05D004288 1.4e-185 653.7 658 55.3
Migut.M00432 Erythranthe guttata HOM05D003691 ORTHO05D004288 3.7e-183 645.6 664 54.2
SalBow7G1078 Salvia bowleyana HOM05D003691 ORTHO05D004288 4.5e-173 612.1 687 52.5
Oeu027232.1 Olea europaea HOM05D003691 ORTHO05D004288 3.8e-164 582.4 657 52.1
Hma1.2p1_0895F.1_g233770 Hydrangea macrophylla HOM05D003691 ORTHO05D004288 5.4e-158 562.0 675 49.9
QL08p031532 Quercus lobata HOM05D003691 ORTHO05D004288 1.2e-154 550.8 659 50.2
GSVIVG01030475001 Vitis vinifera HOM05D003691 ORTHO05D004288 1.4e-153 547.4 673 48.4
Duzib138G0684 Durio zibethinus HOM05D003691 ORTHO05D004288 2.0e-152 543.5 667 49.6
Dinv08745 Davidia involucrata HOM05D003691 ORTHO05D004288 2.6e-152 543.1 670 49.3
MD09G1071300 Malus domestica HOM05D003691 ORTHO05D004288 1.1e-150 537.7 672 49.1
Thecc.01G178100 Theobroma cacao HOM05D003691 ORTHO05D004288 1.4e-150 537.3 668 49.7
CiPaw.03G157800 Carya illinoinensis HOM05D003691 ORTHO05D004288 1.9e-150 537.0 674 48.1
Prupe.3G213700 Prunus persica HOM05D003691 ORTHO05D004288 1.9e-150 537.0 673 48.3
Solyc07g049680.4 Solanum lycopersicum HOM05D003691 ORTHO05D004288 7.0e-150 535.0 660 48.9
Haze_12800 Corylus avellana HOM05D003691 ORTHO05D004288 1.6e-149 533.9 681 49.2
Sopen07g025100 Solanum pennellii HOM05D003691 ORTHO05D004288 2.3e-148 530.0 660 48.6
Dinv39731 Davidia involucrata HOM05D003691 ORTHO05D004288 5.0e-148 528.9 675 47.3
Gohir.D07G088400 Gossypium hirsutum HOM05D003691 ORTHO05D004288 8.6e-148 528.1 666 48.6
Nitab4.5_0015742g0010 Nicotiana tabacum HOM05D003691 ORTHO05D004288 2.5e-147 526.6 663 47.5
vmacro09345 Vaccinium macrocarpon HOM05D003691 ORTHO05D004288 4.3e-147 525.8 654 48.2
Ciclev10014542m.g Citrus clementina HOM05D003691 ORTHO05D004288 7.3e-147 525.0 674 47.0
MELO3C019300.2 Cucumis melo HOM05D003691 ORTHO05D004288 7.3e-147 525.0 672 49.0
Gohir.A07G081900 Gossypium hirsutum HOM05D003691 ORTHO05D004288 9.5e-147 524.6 674 48.1
TWI75G0495 Tripterygium wilfordii HOM05D003691 ORTHO05D004288 1.2e-146 524.2 666 47.1
Gorai.001G094600 Gossypium raimondii HOM05D003691 ORTHO05D004288 2.1e-146 523.5 676 47.9
Manes.04G099700 Manihot esculenta HOM05D003691 ORTHO05D004288 2.1e-146 523.5 665 48.0
FAN09G0430 Fragaria x ananassa HOM05D003691 ORTHO05D004288 3.6e-146 522.7 675 47.3
Sabra14G0117900 Salix brachista HOM05D003691 ORTHO05D004288 3.6e-146 522.7 666 48.3
FAN05G1959 Fragaria x ananassa HOM05D003691 ORTHO05D004288 8.1e-146 521.5 675 47.6
Nitab4.5_0000130g0240 Nicotiana tabacum HOM05D003691 ORTHO05D004288 8.1e-146 521.5 664 46.8
FAN02G0990 Fragaria x ananassa HOM05D003691 ORTHO05D004288 1.1e-145 521.2 661 47.8
CAN.G290.10 Capsicum annuum HOM05D003691 ORTHO05D004288 3.1e-145 519.6 655 47.9
ClCG02G009060 Citrullus lanatus HOM05D003691 ORTHO05D004288 4.0e-145 519.2 675 48.3
Duzib211G0477 Durio zibethinus HOM05D003691 ORTHO05D004288 5.2e-145 518.8 668 48.4
PGSC0003DMG400001077 Solanum tuberosum HOM05D003691 ORTHO05D004288 6.8e-145 518.5 662 48.5
CsaV3_2G034670 Cucumis sativus L. HOM05D003691 ORTHO05D004288 8.9e-145 518.1 675 48.1
RcHm_v2.0_Chr2g0158621 Rosa chinensis HOM05D003691 ORTHO05D004288 3.4e-144 516.2 678 47.1
Sed0022442 Sechium edule HOM05D003691 ORTHO05D004288 5.8e-144 515.4 671 48.1
Atru.chr6.3228 Acer truncatum HOM05D003691 ORTHO05D004288 7.5e-144 515.0 676 47.9
FAN14G5114 Fragaria x ananassa HOM05D003691 ORTHO05D004288 1.7e-143 513.8 677 47.0
FvH4_6g42730 Fragaria vesca HOM05D003691 ORTHO05D004288 1.4e-142 510.8 687 46.4
Rhsim04G0052200 Rhododendron simsii HOM05D003691 ORTHO05D004288 1.9e-142 510.4 679 46.8
DCAR_019753 Daucus carota HOM05D003691 ORTHO05D004288 4.1e-142 509.2 665 47.1
PGR042G1566 Punica granatum HOM05D003691 ORTHO05D004288 1.2e-141 507.7 662 47.1
PSO210G5093 Papaver somniferum HOM05D003691 ORTHO05D004288 6.0e-141 505.4 644 46.9
Cc05_g03670 Coffea canephora HOM05D003691 ORTHO05D004288 7.8e-141 505.0 698 44.6
TWI36G1355 Tripterygium wilfordii HOM05D003691 ORTHO05D004288 7.8e-141 505.0 676 46.2
Potri.014G155900 Populus trichocarpa HOM05D003691 ORTHO05D004288 5.1e-140 502.3 666 46.4
Nn1g03443 Nelumbo nucifera HOM05D003691 ORTHO05D004288 6.6e-140 501.9 675 46.1
TAR624G0007 Trochodendron aralioides HOM05D003691 ORTHO05D004288 8.6e-140 501.5 667 47.1
AT2G32590 Arabidopsis thaliana HOM05D003691 ORTHO05D004288 1.5e-139 500.7 677 45.3
ECA236G1051 Erigeron canadensis HOM05D003691 ORTHO05D004288 7.3e-139 498.4 665 46.0
Sc12g0002210 Simmondsia chinensis HOM05D003691 ORTHO05D004288 9.5e-139 498.0 664 46.5
AL4G27990 Arabidopsis lyrata HOM05D003691 ORTHO05D004288 1.6e-138 497.3 670 45.8
Glyma.12G096700 Glycine max HOM05D003691 ORTHO05D004288 1.6e-138 497.3 665 46.3
Medtr4g050060 Medicago truncatula HOM05D003691 ORTHO05D004288 3.6e-138 496.1 658 46.2
DCAR_021155 Daucus carota HOM05D003691 ORTHO05D004288 1.1e-137 494.6 670 45.8
CANSAT64G0165 Cannabis sativa HOM05D003691 ORTHO05D004288 1.8e-137 493.8 675 46.2
Sp4g14920 Schrenkiella parvula HOM05D003691 ORTHO05D004288 1.8e-137 493.8 670 46.3
Eucgr.A01107 Eucalyptus grandis HOM05D003691 ORTHO05D004288 3.1e-137 493.0 664 47.1
Lj8A127T48 Lonicera japonica HOM05D003691 ORTHO05D004288 5.2e-137 492.3 586 49.3
MBI07_g01730_MAGBIO Magnolia biondii HOM05D003691 ORTHO05D004288 2.0e-136 490.3 655 47.3
Thhalv10016359m.g Eutrema salsugineum HOM05D003691 ORTHO05D004288 3.4e-136 489.6 672 45.4
BraA04t18015Z Brassica rapa HOM05D003691 ORTHO05D004288 4.4e-136 489.2 670 45.2
CARHR126440 Cardamine hirsuta HOM05D003691 ORTHO05D004288 7.6e-136 488.4 675 45.2
A04p25040 Brassica napus HOM05D003691 ORTHO05D004288 2.9e-135 486.5 671 44.7
A05p13290 Brassica napus HOM05D003691 ORTHO05D004288 3.7e-135 486.1 673 44.9
ECA240G1119 Erigeron canadensis HOM05D003691 ORTHO05D004288 3.7e-135 486.1 668 45.1
HanXRQChr04g0126971 Helianthus annuus HOM05D003691 ORTHO05D004288 3.7e-135 486.1 663 43.7
Carub.0004s1392 Capsella rubella HOM05D003691 ORTHO05D004288 6.4e-135 485.3 672 45.2
THA.LOC104816038 Tarenaya hassleriana HOM05D003691 ORTHO05D004288 1.1e-134 484.6 670 45.8
BraA05t20270Z Brassica rapa HOM05D003691 ORTHO05D004288 1.4e-134 484.2 673 45.2
Lj3g0007999 Lotus japonicus HOM05D003691 ORTHO05D004288 1.9e-134 483.8 667 44.8
VMungo1127G0496 Vigna mungo HOM05D003691 ORTHO05D004288 1.9e-134 483.8 666 44.1
Psat7g203760 Pisum sativum HOM05D003691 ORTHO05D004288 4.1e-134 482.6 668 45.2
QL08p006881 Quercus lobata HOM05D003691 ORTHO05D004288 4.1e-134 482.6 664 45.9
Prupe.4G220400 Prunus persica HOM05D003691 ORTHO05D004288 5.4e-134 482.3 650 45.7
Lalb_Chr03g0028581 Lupinus albus HOM05D003691 ORTHO05D004288 7.1e-134 481.9 687 44.8
C04p17080 Brassica napus HOM05D003691 ORTHO05D004288 2.7e-133 479.9 671 44.3
Phvul.011G101300 Phaseolus vulgaris HOM05D003691 ORTHO05D004288 7.8e-133 478.4 670 44.9
Cfa020301 Carpinus fangiana HOM05D003691 ORTHO05D004288 1.3e-132 477.6 657 44.3
TPR.G4630 Trifolium pratense HOM05D003691 ORTHO05D004288 3.0e-132 476.5 688 44.0
arahy.Tifrunner.gnm1.ann1.4D79G7 Arachis hypogaea HOM05D003691 ORTHO05D004288 3.9e-132 476.1 678 44.5
arahy.Tifrunner.gnm1.ann1.AS5DTW Arachis hypogaea HOM05D003691 ORTHO05D004288 3.9e-132 476.1 678 44.5
Glyma.06G308100 Glycine max HOM05D003691 ORTHO05D004288 8.6e-132 474.9 664 44.9
Lsat_1_v5_gn_7_93200 Lactuca sativa HOM05D003691 ORTHO05D004288 1.9e-131 473.8 662 43.4
Aqoxy1G03453 Aquilegia oxysepala HOM05D003691 ORTHO05D004288 4.3e-131 472.6 681 43.9
BolC4t23260H Brassica oleracea HOM05D003691 ORTHO05D004288 9.6e-131 471.5 691 43.4
Aa31LG5G4740 Aethionema arabicum HOM05D003691 ORTHO05D004288 4.7e-130 469.2 666 43.5
EL10Ac4g07751 Beta vulgaris HOM05D003691 ORTHO05D004288 4.0e-129 466.1 688 44.2
THA.LOC104826143 Tarenaya hassleriana HOM05D003691 ORTHO05D004288 4.9e-127 459.1 680 44.1
AUR62015833 Chenopodium quinoa HOM05D003691 ORTHO05D004288 6.4e-127 458.8 684 42.8
Glyma.12G191300 Glycine max HOM05D003691 ORTHO05D004288 1.4e-126 457.6 677 43.3
Hund02023 Selenicereus undatus HOM05D003691 ORTHO05D004288 1.4e-126 457.6 691 42.8
VMungo1080G0849 Vigna mungo HOM05D003691 ORTHO05D004288 4.2e-126 456.1 667 43.9
TPR.G4243 Trifolium pratense HOM05D003691 ORTHO05D004288 2.1e-125 453.8 681 43.5
TAR626G1388 Trochodendron aralioides HOM05D003691 ORTHO05D004288 2.1e-125 453.8 595 47.1
Peaxi162Scf00007g00129 Petunia axillaris HOM05D003691 ORTHO05D004288 4.6e-125 452.6 661 44.3
Psat5g261240 Pisum sativum HOM05D003691 ORTHO05D004288 1.7e-124 450.7 665 43.9
Phvul.005G116900 Phaseolus vulgaris HOM05D003691 ORTHO05D004288 5.1e-124 449.1 680 42.6
FAN21G2044 Fragaria x ananassa HOM05D003691 ORTHO05D004288 1.5e-123 447.6 613 45.5
Atru.chr2.3500 Acer truncatum HOM05D003691 ORTHO05D004288 1.9e-123 447.2 677 44.2
Ah.06g182530 Amaranthus hybridus HOM05D003691 ORTHO05D004288 7.3e-123 445.3 673 43.8
Lsat_1_v5_gn_9_106740 Lactuca sativa HOM05D003691 ORTHO05D004288 2.1e-122 443.7 628 45.1
Medtr2g087880 Medicago truncatula HOM05D003691 ORTHO05D004288 2.1e-122 443.7 667 43.2
Thecc.07G031000 Theobroma cacao HOM05D003691 ORTHO05D004288 2.1e-122 443.7 664 43.5
ATR0317G123 Amborella trichopoda HOM05D003691 ORTHO05D004288 4.8e-122 442.6 661 44.5
Ca_01616_v3 Cicer arietinum L. HOM05D003691 ORTHO05D004288 2.2e-119 433.7 692 41.5
Ca_19493_v3 Cicer arietinum L. HOM05D003691 ORTHO05D004288 2.2e-119 433.7 673 42.5
FvH4_3g23280 Fragaria vesca HOM05D003691 ORTHO05D004288 2.9e-119 433.3 646 42.7
RcHm_v2.0_Chr5g0041001 Rosa chinensis HOM05D003691 ORTHO05D004288 1.3e-116 424.5 647 43.0
Ciclev10007620m.g Citrus clementina HOM05D003691 ORTHO05D004288 3.0e-116 423.3 708 41.2
HPP92_023149 Vanilla planifolia HOM05D003691 ORTHO05D004288 6.6e-116 422.2 651 44.4
MD11G1212100 Malus domestica HOM05D003691 ORTHO05D004288 8.7e-116 421.8 625 41.6
BcaB06g28606 Brassica carinata HOM05D003691 ORTHO05D004288 1.9e-115 420.6 657 40.9
Zm00001eb162990 Zea mays HOM05D003691 ORTHO05D004288 2.4e-113 413.7 646 42.6
LjContig00274_ERROPOS1100000g0006521 Lotus japonicus HOM05D003691 ORTHO05D004288 4.9e-111 406.0 599 44.1
Cpa.g.sc87.104 Carica papaya HOM05D003691 ORTHO05D004288 1.1e-110 404.8 513 48.1
AUR62020387 Chenopodium quinoa HOM05D003691 ORTHO05D004288 2.1e-109 400.6 674 42.1
BcaB06g28605 Brassica carinata HOM05D003691 ORTHO05D004288 3.0e-108 396.7 607 43.7
Haze_09719 Corylus avellana HOM05D003691 ORTHO05D004288 2.4e-105 387.1 724 38.8
Hund02022 Selenicereus undatus HOM05D003691 ORTHO05D004288 5.3e-105 386.0 677 40.5
GSVIVG01037701001 Vitis vinifera HOM05D003691 ORTHO05D004288 5.5e-102 375.9 624 40.7
Hund02025 Selenicereus undatus HOM05D003691 ORTHO05D004288 6.0e-101 372.5 677 39.0
FAN11G2344 Fragaria x ananassa HOM05D003691 ORTHO05D004288 5.7e-99 365.9 592 41.0
BcaB02g10460 Brassica carinata HOM05D003691 ORTHO05D004288 1.2e-96 358.2 502 45.2
Oeu036739.1 Olea europaea HOM05D003691 ORTHO05D004288 1.3e-95 354.8 259 73.0
CiPaw.11G193000 Carya illinoinensis HOM05D003691 ORTHO05D004288 3.3e-91 340.1 496 46.4
Actinidia10811 Actinidia chinensis HOM05D003691 ORTHO05D004288 5.7e-91 339.3 315 59.7
C04p62100 Brassica napus HOM05D003691 ORTHO05D004288 6.9e-89 332.4 347 55.6
BcaC02g07908 Brassica carinata HOM05D003691 ORTHO05D004288 1.0e-87 328.6 598 40.1
Pp3c11_22430 Physcomitrium patens HOM05D003691 ORTHO05D004288 2.2e-87 327.4 672 36.6
COL.COLO4_09704 Corchorus olitorius HOM05D003691 ORTHO05D004288 3.2e-86 323.6 498 42.6
AUR62020385 Chenopodium quinoa HOM05D003691 ORTHO05D004288 7.9e-85 318.9 288 60.1
Mapoly0002s0133 Marchantia polymorpha HOM05D003691 ORTHO05D004288 1.4e-84 318.2 702 35.9
AUR62015832 Chenopodium quinoa HOM05D003691 ORTHO05D004288 2.0e-83 314.3 592 39.0
CSS0013476 Camellia sinensis var. sinensis HOM05D003691 ORTHO05D004288 7.4e-83 312.4 501 40.3
Dinv22243 Davidia involucrata HOM05D003691 ORTHO05D004288 2.8e-82 310.5 499 42.7
Lalb_Chr19g0136071 Lupinus albus HOM05D003691 ORTHO05D004288 4.8e-82 309.7 353 52.1
BolC4t27689H Brassica oleracea HOM05D003691 ORTHO05D004288 7.7e-80 302.4 535 38.1
SEGI_30766 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 2.5e-78 297.4 582 36.6
FAN25G2100 Fragaria x ananassa HOM05D003691 ORTHO05D004288 8.8e-76 288.9 278 57.9
AagrBONN_evm.TU.Sc2ySwM_228.2537 Anthoceros agrestis HOM05D003691 ORTHO05D004288 2.8e-74 283.9 692 34.0
CBR_g26183 Chara braunii HOM05D003691 ORTHO05D004288 2.6e-72 277.3 786 31.9
SEGI_37895 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 8.5e-71 272.3 547 37.1
Gohir.A07G186000 Gossypium hirsutum HOM05D003691 ORTHO05D004288 6.3e-66 256.1 435 40.0
Pp3c7_4280 Physcomitrium patens HOM05D003691 ORTHO05D004288 3.5e-64 250.4 676 32.7
Lj8A171G44 Lonicera japonica HOM05D003691 ORTHO05D004288 3.8e-63 246.9 487 38.0
MD17G1101300 Malus domestica HOM05D003691 ORTHO05D004288 9.1e-57 225.7 258 54.7
MCO04G245 Micromonas commoda HOM05D003691 ORTHO05D004288 3.6e-53 213.8 678 30.2
PRCOL_00002032 Prasinoderma coloniale HOM05D003691 ORTHO05D004288 5.0e-47 193.4 612 28.6
Lalb_Chr19g0136061 Lupinus albus HOM05D003691 ORTHO05D004288 8.9e-44 182.6 188 48.4
CDE09G1127 Ceratophyllum demersum HOM05D003691 ORTHO05D004288 2.7e-40 171.0 210 51.4
MD03G1195700 Malus domestica HOM05D003691 ORTHO05D004288 2.7e-40 171.0 409 31.3
Actinidia10812 Actinidia chinensis HOM05D003691 ORTHO05D004288 5.0e-39 166.8 211 42.2
FAN25G2879 Fragaria x ananassa HOM05D003691 ORTHO05D004288 4.9e-34 150.2 187 45.5
Os01g0532800 Oryza sativa ssp. japonica HOM05D003691 ORTHO05D004288 1.1e-33 149.1 208 41.3
SHI10368 Sapria himalayana HOM05D003691 ORTHO05D004288 4.4e-27 127.1 202 40.1
Sed0010458 Sechium edule HOM05D003691 ORTHO05D004288 7.5e-27 126.3 248 36.3
Lj8A171G43 Lonicera japonica HOM05D003691 ORTHO05D004288 2.2e-26 124.8 175 44.0
Cfa026695 Carpinus fangiana HOM05D003691 ORTHO05D004288 7.1e-25 119.8 271 32.8
MD03G1195600 Malus domestica HOM05D003691 ORTHO05D004288 1.6e-24 118.6 137 49.6
C04p62090 Brassica napus HOM05D003691 ORTHO05D004288 4.0e-20 104.0 135 45.2
arahy.Tifrunner.gnm1.ann1.NAA2I0 Arachis hypogaea HOM05D003691 ORTHO05D004288 2.2e-18 98.2 61 80.3
SEGI_15855 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 1.9e-17 95.1 104 52.9
CAN.G574.39 Capsicum annuum HOM05D003691 ORTHO05D004288 7.1e-17 93.2 87 54.0
Dinv22244 Davidia involucrata HOM05D007542 ORTHO05D009519 7.1e-17 93.2 86 54.7
SEGI_16706 Sequoiadendron giganteum HOM05D003691 ORTHO05D017750 6.0e-16 90.1 107 51.4
EL10Ac4g08622 Beta vulgaris HOM05D003691 ORTHO05D019836 1.5e-14 85.5 69 56.5
CAN.G574.40 Capsicum annuum HOM05D003691 ORTHO05D004288 9.6e-14 82.8 47 76.6
TPR.G2961 Trifolium pratense HOM05D001978 ORTHO05D003036 5.2e-12 77.0 64 56.2
SHI10370 Sapria himalayana HOM05D000105 ORTHO05D000023 2.0e-11 75.1 48 75.0
Glyma.13G310451 Glycine max HOM05D003691 ORTHO05D004288 7.6e-11 73.2 50 60.0
SHI10371 Sapria himalayana HOM05D003691 ORTHO05D004288 4.2e-09 67.4 86 51.2
FAN16G1928 Fragaria x ananassa HOM05D003691 ORTHO05D004288 1.2e-08 65.9 63 57.1
Lj8A127T49 Lonicera japonica HOM05D003691 ORTHO05D004288 3.5e-08 64.3 70 52.9


User provided reference genes

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