Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_60.g25717 Utricularia gibba HOM05D002739 ORTHO05D002877 1.3e-41 172.6 83 100.0
MSTRG.21276 Avicennia marina HOM05D002739 ORTHO05D002877 6.3e-12 73.9 51 62.7
Lsat_1_v5_gn_1_97381 Lactuca sativa HOM05D002739 ORTHO05D002877 3.1e-11 71.6 62 51.6
Oeu027475.1 Olea europaea HOM05D002739 ORTHO05D002877 5.4e-11 70.9 75 41.3
SGA_v2.0_scaffold24G10703 Striga asiatica HOM05D002739 ORTHO05D002877 9.1e-11 70.1 55 49.1
HanXRQChr01g0020811 Helianthus annuus HOM05D002739 ORTHO05D002877 1.2e-10 69.7 62 51.6
Actinidia19441 Actinidia chinensis HOM05D002739 ORTHO05D002877 3.5e-10 68.2 61 47.5
Migut.D00796 Erythranthe guttata HOM05D002739 ORTHO05D002877 4.5e-10 67.8 68 42.6
Manes.11G031500 Manihot esculenta HOM05D002739 ORTHO05D002877 5.9e-10 67.4 69 44.9
DCAR_022358 Daucus carota HOM05D002739 ORTHO05D002877 1.3e-09 66.2 75 38.7
Cc02_g29460 Coffea canephora HOM05D002739 ORTHO05D002877 2.2e-09 65.5 52 50.0
HanXRQChr14g0441021 Helianthus annuus HOM05D002739 ORTHO05D002877 3.8e-09 64.7 60 46.7
Manes.04G135500 Manihot esculenta HOM05D002739 ORTHO05D002877 5.0e-09 64.3 40 60.0
Aqoxy2G00287 Aquilegia oxysepala HOM05D002739 ORTHO05D002877 6.5e-09 63.9 78 33.3
ECA238G2259 Erigeron canadensis HOM05D002739 ORTHO05D002877 6.5e-09 63.9 41 61.0
CiPaw.13G010100 Carya illinoinensis HOM05D002739 ORTHO05D002877 8.5e-09 63.5 48 54.2
Potri.001G023200 Populus trichocarpa HOM05D002739 ORTHO05D002877 8.5e-09 63.5 60 45.0
Rhsim07G0062000 Rhododendron simsii HOM05D002739 ORTHO05D002877 8.5e-09 63.5 71 43.7
Ah.12g065190 Amaranthus hybridus HOM05D002739 ORTHO05D002877 1.1e-08 63.2 81 39.5
Sc10g0004220 Simmondsia chinensis HOM05D002739 ORTHO05D002877 1.5e-08 62.8 74 36.5
vmacro13721 Vaccinium macrocarpon HOM05D002739 ORTHO05D002877 1.5e-08 62.8 70 41.4
EL10Ac4g08094 Beta vulgaris HOM05D002739 ORTHO05D002877 1.9e-08 62.4 76 38.2
Cfa009830 Carpinus fangiana HOM05D002739 ORTHO05D002877 1.9e-08 62.4 80 33.8
QL04p013222 Quercus lobata HOM05D002739 ORTHO05D002877 2.5e-08 62.0 64 39.1
Hund15707 Selenicereus undatus HOM05D002739 ORTHO05D002877 2.5e-08 62.0 65 43.1
THA.LOC104819118 Tarenaya hassleriana HOM05D002739 ORTHO05D002877 3.2e-08 61.6 62 43.5
TAR623G0756 Trochodendron aralioides HOM05D002739 ORTHO05D002877 3.2e-08 61.6 76 35.5
BolC1t00795H Brassica oleracea HOM05D002739 ORTHO05D002877 4.2e-08 61.2 62 41.9
CARHR238780 Cardamine hirsuta HOM05D002739 ORTHO05D002877 4.2e-08 61.2 62 41.9
Medtr4g076150 Medicago truncatula HOM05D002739 ORTHO05D002877 4.2e-08 61.2 64 37.5
PSO384G3246 Papaver somniferum HOM05D002739 ORTHO05D002877 4.2e-08 61.2 66 43.9
Sc14g0005800 Simmondsia chinensis HOM05D002739 ORTHO05D002877 4.2e-08 61.2 54 46.3
Carub.0007s0967 Capsella rubella HOM05D002739 ORTHO05D002877 5.5e-08 60.8 61 44.3
Haze_23193 Corylus avellana HOM05D002739 ORTHO05D002877 5.5e-08 60.8 79 34.2
AT4G30880 Arabidopsis thaliana HOM05D002739 ORTHO05D002877 7.2e-08 60.5 62 41.9
PSO339G6632 Papaver somniferum HOM05D002739 ORTHO05D002877 7.2e-08 60.5 70 41.4
TWI38G1066 Tripterygium wilfordii HOM05D002739 ORTHO05D002877 7.2e-08 60.5 76 32.9
BcaC09g51875 Brassica carinata HOM05D002739 ORTHO05D002877 9.4e-08 60.1 62 40.3
BcaNung03432 Brassica carinata HOM05D002739 ORTHO05D002877 9.4e-08 60.1 62 40.3
A01p07300 Brassica napus HOM05D002739 ORTHO05D002877 9.4e-08 60.1 62 40.3
C01p08060 Brassica napus HOM05D002739 ORTHO05D002877 9.4e-08 60.1 62 40.3
BraA01t00679Z Brassica rapa HOM05D002739 ORTHO05D002877 9.4e-08 60.1 62 40.3
Medtr4g077180 Medicago truncatula HOM05D002739 ORTHO05D002877 1.2e-07 59.7 64 34.4
Sabra01G0017500 Salix brachista HOM05D002739 ORTHO05D002877 1.2e-07 59.7 64 39.1
Sp7g28750 Schrenkiella parvula HOM05D002739 ORTHO05D002877 1.2e-07 59.7 62 41.9
Glyma.11G095900 Glycine max HOM05D002739 ORTHO05D002877 1.6e-07 59.3 59 42.4
QL04p013297 Quercus lobata HOM05D002739 ORTHO05D002877 1.6e-07 59.3 53 41.5
VMungo1127G0532 Vigna mungo HOM05D002739 ORTHO05D002877 1.6e-07 59.3 59 42.4
BcaC01g01134 Brassica carinata HOM05D002739 ORTHO05D002877 2.1e-07 58.9 61 41.0
C03p88470 Brassica napus HOM05D002739 ORTHO05D002877 2.1e-07 58.9 61 41.0
BolC3t21155H Brassica oleracea HOM05D002739 ORTHO05D002877 2.1e-07 58.9 61 41.0
Haze_03109 Corylus avellana HOM05D002215 ORTHO05D002238 2.7e-07 58.5 74 35.1
Migut.D00661 Erythranthe guttata HOM05D002739 ORTHO05D002877 2.7e-07 58.5 67 40.3
Nn7g36442 Nelumbo nucifera HOM05D002739 ORTHO05D002877 2.7e-07 58.5 78 30.8
Nn7g36457 Nelumbo nucifera HOM05D002739 ORTHO05D002877 2.7e-07 58.5 78 30.8
Nn7g38448 Nelumbo nucifera HOM05D002739 ORTHO05D002877 2.7e-07 58.5 78 30.8
Potri.001G023300 Populus trichocarpa HOM05D002739 ORTHO05D002877 2.7e-07 58.5 60 41.7
QL01p017875 Quercus lobata HOM05D002739 ORTHO05D002877 2.7e-07 58.5 74 39.2
QL04p013260 Quercus lobata HOM05D002739 ORTHO05D002877 2.7e-07 58.5 53 39.6
Aa31LG2G19500 Aethionema arabicum HOM05D002739 ORTHO05D002877 3.6e-07 58.2 60 41.7
BraA08t33865Z Brassica rapa HOM05D002739 ORTHO05D002877 3.6e-07 58.2 51 43.1
CSS0000269 Camellia sinensis var. sinensis HOM05D002739 ORTHO05D002877 4.7e-07 57.8 84 34.5
CSS0014844 Camellia sinensis var. sinensis HOM05D002739 ORTHO05D002877 4.7e-07 57.8 84 34.5
Gohir.A07G121800 Gossypium hirsutum HOM05D002739 ORTHO05D002877 4.7e-07 57.8 68 35.3
PSO339G2204 Papaver somniferum HOM05D002739 ORTHO05D002877 4.7e-07 57.8 66 40.9
PSO384G1774 Papaver somniferum HOM05D002739 ORTHO05D002877 4.7e-07 57.8 70 41.4
PSO384G3657 Papaver somniferum HOM05D002739 ORTHO05D002877 4.7e-07 57.8 70 41.4
VMungo1080G0282 Vigna mungo HOM05D002739 ORTHO05D002877 4.7e-07 57.8 64 43.8
AL7G21220 Arabidopsis lyrata HOM05D002739 ORTHO05D002877 6.1e-07 57.4 60 41.7
CSS0046368 Camellia sinensis var. sinensis HOM05D002739 ORTHO05D002877 6.1e-07 57.4 66 37.9
AUR62026811 Chenopodium quinoa HOM05D000453 ORTHO05D000387 6.1e-07 57.4 44 47.7
Lj1g0024813 Lotus japonicus HOM05D002739 ORTHO05D002877 6.1e-07 57.4 64 40.6
THA.LOC104826714 Tarenaya hassleriana HOM05D002739 ORTHO05D002877 6.1e-07 57.4 59 42.4
TAR369G0010 Trochodendron aralioides HOM05D001447 ORTHO05D005923 6.1e-07 57.4 71 39.4
CSS0048223 Camellia sinensis var. sinensis HOM05D002739 ORTHO05D002877 8.0e-07 57.0 78 35.9
PSO339G0161 Papaver somniferum HOM05D002739 ORTHO05D002877 8.0e-07 57.0 75 37.3
TAR622G0220 Trochodendron aralioides HOM05D002739 ORTHO05D002877 8.0e-07 57.0 71 39.4
AUR62037242 Chenopodium quinoa HOM05D000453 ORTHO05D000387 1.0e-06 56.6 73 37.0
Thhalv10026851m.g Eutrema salsugineum HOM05D002739 ORTHO05D002877 1.0e-06 56.6 62 38.7
Migut.D00663 Erythranthe guttata HOM05D002739 ORTHO05D002877 1.4e-06 56.2 72 37.5
Glyma.12G022000 Glycine max HOM05D002739 ORTHO05D002877 1.4e-06 56.2 59 37.3
PSO384G1869 Papaver somniferum HOM05D002739 ORTHO05D002877 1.4e-06 56.2 73 35.6
THA.LOC104826487 Tarenaya hassleriana HOM05D002739 ORTHO05D002877 1.4e-06 56.2 61 42.6
MD02G1296300 Malus domestica HOM05D002739 ORTHO05D002877 1.8e-06 55.8 78 33.3
arahy.Tifrunner.gnm1.ann1.YF5LNJ Arachis hypogaea HOM05D002739 ORTHO05D002877 2.3e-06 55.5 51 43.1
BcaB03g12664 Brassica carinata HOM05D002739 ORTHO05D002877 2.3e-06 55.5 76 31.6
Ciclev10017226m.g Citrus clementina HOM05D002739 ORTHO05D002877 2.3e-06 55.5 64 37.5
arahy.Tifrunner.gnm1.ann1.ZFJ3WN Arachis hypogaea HOM05D002739 ORTHO05D002877 3.0e-06 55.1 68 36.8
ECA236G2864 Erigeron canadensis HOM05D002739 ORTHO05D002877 3.0e-06 55.1 36 61.1
Lj3g0006865 Lotus japonicus HOM05D002739 ORTHO05D002877 3.0e-06 55.1 74 33.8
Lj4g0026950 Lotus japonicus HOM05D002739 ORTHO05D002877 3.0e-06 55.1 64 39.1
TPR.G35352 Trifolium pratense HOM05D002739 ORTHO05D002877 3.0e-06 55.1 62 41.9
COL.COLO4_36502 Corchorus olitorius HOM05D002739 ORTHO05D002877 4.0e-06 54.7 71 38.0
Gohir.D07G126100 Gossypium hirsutum HOM05D002739 ORTHO05D002877 4.0e-06 54.7 66 33.3
Gorai.001G136100 Gossypium raimondii HOM05D002739 ORTHO05D002877 4.0e-06 54.7 66 33.3
PGR031G2149 Punica granatum HOM05D002739 ORTHO05D002877 4.0e-06 54.7 43 44.2
QL01p026935 Quercus lobata HOM05D002739 ORTHO05D002877 4.0e-06 54.7 68 33.8
Sabra01G0017600 Salix brachista HOM05D002739 ORTHO05D002877 4.0e-06 54.7 61 41.0
EL10Ac2g02871 Beta vulgaris HOM05D002739 ORTHO05D002877 5.2e-06 54.3 60 38.3
Ciclev10017233m.g Citrus clementina HOM05D002739 ORTHO05D002877 5.2e-06 54.3 82 28.0
COL.COLO4_04118 Corchorus olitorius HOM05D002739 ORTHO05D002877 5.2e-06 54.3 71 38.0
Dinv36202 Davidia involucrata HOM05D002739 ORTHO05D002877 6.8e-06 53.9 53 41.5
Manes.14G006000 Manihot esculenta HOM05D002739 ORTHO05D002877 6.8e-06 53.9 76 32.9
Nn7g36467 Nelumbo nucifera HOM05D002739 ORTHO05D002877 6.8e-06 53.9 81 29.6
CiPaw.13G010000 Carya illinoinensis HOM05D002739 ORTHO05D002877 8.8e-06 53.5 73 38.4
Phvul.011G024000 Phaseolus vulgaris HOM05D002739 ORTHO05D002877 8.8e-06 53.5 59 39.0


User provided reference genes

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