Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_60.g25647 Utricularia gibba HOM05D007572 ORTHO05D009535 1.1e-66 256.5 129 100.0
SalBow6G4072 Salvia bowleyana HOM05D007572 ORTHO05D009535 8.8e-29 130.6 129 55.0
Oeu052583.1 Olea europaea HOM05D007572 ORTHO05D009535 3.4e-28 128.6 134 57.5
Dinv12090 Davidia involucrata HOM05D007572 ORTHO05D009535 1.3e-27 126.7 140 52.9
Nn3g21914 Nelumbo nucifera HOM05D007572 ORTHO05D009535 3.1e-26 122.1 142 51.4
Potri.002G188300 Populus trichocarpa HOM05D007572 ORTHO05D009535 1.6e-25 119.8 138 50.0
CiPaw.08G083700 Carya illinoinensis HOM05D007572 ORTHO05D009535 2.7e-25 119.0 138 52.2
Lj1g0010997 Lotus japonicus HOM05D007572 ORTHO05D009535 2.7e-25 119.0 137 51.1
Sopen06g004090 Solanum pennellii HOM05D007572 ORTHO05D009535 2.7e-25 119.0 144 50.0
Eucgr.K00578 Eucalyptus grandis HOM05D007572 ORTHO05D009535 5.9e-25 117.9 138 47.1
Solyc06g009340.4 Solanum lycopersicum HOM05D007572 ORTHO05D009535 7.8e-25 117.5 144 49.3
CAN.G1280.44 Capsicum annuum HOM05D007572 ORTHO05D009535 1.3e-24 116.7 138 48.6
HanXRQChr13g0414461 Helianthus annuus HOM05D007572 ORTHO05D009535 2.3e-24 115.9 133 52.6
Gohir.A07G131300 Gossypium hirsutum HOM05D007572 ORTHO05D009535 2.9e-24 115.5 142 50.0
TWI23G0551 Tripterygium wilfordii HOM05D007572 ORTHO05D009535 3.8e-24 115.2 134 50.0
Duzib138G0176 Durio zibethinus HOM05D007572 ORTHO05D009535 5.0e-24 114.8 142 48.6
Phvul.001G217100 Phaseolus vulgaris HOM05D007572 ORTHO05D009535 6.6e-24 114.4 140 48.6
arahy.Tifrunner.gnm1.ann1.W6UB1T Arachis hypogaea HOM05D007572 ORTHO05D009535 8.6e-24 114.0 138 49.3
MELO3C034050.2 Cucumis melo HOM05D007572 ORTHO05D009535 8.6e-24 114.0 141 48.9
CsaV3_5G029750 Cucumis sativus L. HOM05D007572 ORTHO05D009535 8.6e-24 114.0 141 48.9
Migut.D00021 Erythranthe guttata HOM05D007572 ORTHO05D009535 1.1e-23 113.6 145 45.5
Lsat_1_v5_gn_8_167180 Lactuca sativa HOM05D007572 ORTHO05D009535 1.1e-23 113.6 131 49.6
arahy.Tifrunner.gnm1.ann1.XSK3JW Arachis hypogaea HOM05D007572 ORTHO05D009535 1.5e-23 113.2 138 48.6
Gohir.D07G135600 Gossypium hirsutum HOM05D007572 ORTHO05D009535 1.9e-23 112.8 142 48.6
Psat3g018080 Pisum sativum HOM05D007572 ORTHO05D009535 1.9e-23 112.8 142 47.2
Medtr7g110410 Medicago truncatula HOM05D007572 ORTHO05D009535 2.5e-23 112.5 141 48.2
Glyma.03G223300 Glycine max HOM05D007572 ORTHO05D009535 4.3e-23 111.7 136 47.1
Manes.05G010100 Manihot esculenta HOM05D007572 ORTHO05D009535 5.6e-23 111.3 138 47.8
TPR.G2442 Trifolium pratense HOM05D007572 ORTHO05D009535 7.3e-23 110.9 141 47.5
Cc01_g21830 Coffea canephora HOM05D007572 ORTHO05D009535 1.2e-22 110.2 129 47.3
PGR142G3328 Punica granatum HOM05D007572 ORTHO05D009535 1.6e-22 109.8 138 45.7
Lalb_Chr04g0260171 Lupinus albus HOM05D007572 ORTHO05D009535 2.1e-22 109.4 142 46.5
Aqoxy2G02521 Aquilegia oxysepala HOM05D007572 ORTHO05D009535 3.6e-22 108.6 140 47.9
Sed0017651 Sechium edule HOM05D007572 ORTHO05D009535 4.7e-22 108.2 141 46.8
Nitab4.5_0003324g0080 Nicotiana tabacum HOM05D007572 ORTHO05D009535 6.1e-22 107.8 146 47.9
Zm00001eb110000 Zea mays HOM05D007572 ORTHO05D009535 1.0e-21 107.1 138 49.3
CDE02G1692 Ceratophyllum demersum HOM05D007572 ORTHO05D009535 1.8e-21 106.3 137 48.2
PSO210G6566 Papaver somniferum HOM05D007572 ORTHO05D009535 2.3e-21 105.9 147 45.6
Hund11629 Selenicereus undatus HOM05D007572 ORTHO05D009535 2.3e-21 105.9 134 45.5
Thhalv10006305m.g Eutrema salsugineum HOM05D007572 ORTHO05D009535 1.5e-20 103.2 140 45.0
ATR0796G039 Amborella trichopoda HOM05D007572 ORTHO05D009535 2.0e-20 102.8 133 47.4
Nitab4.5_0000363g0140 Nicotiana tabacum HOM05D007572 ORTHO05D009535 5.7e-20 101.3 118 51.7
AL5G44940 Arabidopsis lyrata HOM05D007572 ORTHO05D009535 7.5e-20 100.9 140 45.0
AT3G62190 Arabidopsis thaliana HOM05D007572 ORTHO05D009535 2.2e-19 99.4 140 45.0
C08p37130 Brassica napus HOM05D007572 ORTHO05D009535 3.7e-19 98.6 140 44.3
BolC8t51291H Brassica oleracea HOM05D007572 ORTHO05D009535 3.7e-19 98.6 140 44.3
BraA09t40838Z Brassica rapa HOM05D007572 ORTHO05D009535 4.9e-19 98.2 140 44.3
PGSC0003DMG400007276 Solanum tuberosum HOM05D007572 ORTHO05D009535 4.9e-19 98.2 111 51.4
Sp5g01190 Schrenkiella parvula HOM05D007572 ORTHO05D009535 8.3e-19 97.4 139 44.6
Carub.0005s2892 Capsella rubella HOM05D007572 ORTHO05D009535 1.4e-18 96.7 140 44.3
Pp3c17_19540 Physcomitrium patens HOM05D007572 ORTHO05D009535 2.7e-17 92.4 142 42.3
Ah.11g045850 Amaranthus hybridus HOM05D007572 ORTHO05D009535 2.3e-16 89.4 114 45.6
vmacro16962 Vaccinium macrocarpon HOM05D007572 ORTHO05D009535 2.3e-16 89.4 123 44.7
VMungo1383G1880 Vigna mungo HOM05D007572 ORTHO05D009535 4.3e-15 85.1 127 44.9
A09p54260 Brassica napus HOM05D007572 ORTHO05D009535 7.3e-15 84.3 121 43.8
Peaxi162Scf00058g02018 Petunia axillaris HOM05D007572 ORTHO05D009535 6.2e-14 81.3 114 44.7
Aa31LG10G16130 Aethionema arabicum HOM05D007572 ORTHO05D009535 2.3e-13 79.3 186 32.3
DCAR_002931 Daucus carota HOM05D007572 ORTHO05D009535 4.0e-13 78.6 66 59.1
Sabra02G0167000 Salix brachista HOM05D007572 ORTHO05D009535 6.8e-13 77.8 64 60.9
Gorai.001G147700 Gossypium raimondii HOM05D007572 ORTHO05D009535 1.2e-12 77.0 64 59.4
Rhsim01G0293200 Rhododendron simsii HOM05D007572 ORTHO05D009535 1.2e-12 77.0 179 33.5
Duzib133G1540 Durio zibethinus HOM05D007572 ORTHO05D009535 1.5e-12 76.6 64 59.4
Thecc.01G323700 Theobroma cacao HOM05D000023 ORTHO05D000014 1.5e-12 76.6 64 60.9
MBI18_g10389_MAGBIO Magnolia biondii HOM05D007572 ORTHO05D009535 2.6e-12 75.9 66 56.1
Cfa004892 Carpinus fangiana HOM05D007572 ORTHO05D009535 4.4e-12 75.1 66 60.6
Sc05g0000110 Simmondsia chinensis HOM05D007572 ORTHO05D009535 4.4e-12 75.1 67 55.2
CBR_g88332 Chara braunii HOM05D007572 ORTHO05D009535 9.8e-12 73.9 157 33.8
AagrBONN_evm.TU.Sc2ySwM_228.110 Anthoceros agrestis HOM05D007572 ORTHO05D009535 1.3e-11 73.6 138 38.4
Haze_05130 Corylus avellana HOM05D007572 ORTHO05D009535 1.3e-11 73.6 64 59.4
SGA_v2.0_scaffold80G25682 Striga asiatica HOM05D007572 ORTHO05D009535 1.3e-11 73.6 53 64.2
ECA236G0789 Erigeron canadensis HOM05D004810 ORTHO05D006272 2.2e-11 72.8 60 60.0
AUR62011699 Chenopodium quinoa HOM05D007572 ORTHO05D009535 3.7e-11 72.0 64 54.7
BcaC07g40711 Brassica carinata HOM05D007572 ORTHO05D009535 1.4e-10 70.1 126 38.1
GSVIVG01028266001 Vitis vinifera HOM05D007572 ORTHO05D009535 1.4e-10 70.1 64 57.8
PSO761G0106 Papaver somniferum HOM05D007572 ORTHO05D009535 7.0e-10 67.8 64 56.2
COL.COLO4_23146 Corchorus olitorius HOM05D000023 ORTHO05D000014 9.2e-10 67.4 78 47.4
CANSAT01G2141 Cannabis sativa HOM05D007572 ORTHO05D009535 1.6e-09 66.6 58 56.9
Os07g0637100 Oryza sativa ssp. japonica HOM05D007572 ORTHO05D009535 1.6e-09 66.6 54 59.3
ClCG11G013240 Citrullus lanatus HOM05D007572 ORTHO05D009535 4.3e-07 58.5 60 48.3
Atru.chr5.887 Acer truncatum HOM05D007572 ORTHO05D009535 1.2e-06 57.0 54 50.0
Ciclev10023453m.g Citrus clementina HOM05D007572 ORTHO05D009535 2.8e-06 55.8 53 52.8
Ciclev10024492m.g Citrus clementina HOM05D007572 ORTHO05D009535 2.8e-06 55.8 57 52.6
Sabra02G0166900 Salix brachista HOM05D000023 ORTHO05D000014 3.6e-06 55.5 38 63.2


User provided reference genes

Program Settings