Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_60.g25635 Utricularia gibba HOM05D003381 ORTHO05D003880 5.3e-45 184.1 102 100.0
Atru.chr12.2523 Acer truncatum HOM05D003381 ORTHO05D003880 2.4e-21 105.5 88 64.8
PGSC0003DMG400027025 Solanum tuberosum HOM05D003381 ORTHO05D003880 1.6e-20 102.8 83 68.7
Atru.chr12.2499 Acer truncatum HOM05D003381 ORTHO05D003880 2.0e-20 102.4 83 67.5
Sopen06g029340 Solanum pennellii HOM05D003381 ORTHO05D003880 2.7e-20 102.1 83 68.7
CAN.G303.62 Capsicum annuum HOM05D003381 ORTHO05D003880 3.5e-20 101.7 83 68.7
Nitab4.5_0007121g0010 Nicotiana tabacum HOM05D003381 ORTHO05D003880 5.9e-20 100.9 83 67.5
Migut.F00121 Erythranthe guttata HOM05D003381 ORTHO05D003880 7.8e-20 100.5 84 69.0
Lj1g0021256 Lotus japonicus HOM05D003381 ORTHO05D003880 1.0e-19 100.1 82 65.9
MSTRG.26951 Avicennia marina HOM05D003381 ORTHO05D003880 1.3e-19 99.8 86 67.4
Sopen03g027490 Solanum pennellii HOM05D003381 ORTHO05D003880 2.3e-19 99.0 83 68.7
Peaxi162Scf00007g00254 Petunia axillaris HOM05D003381 ORTHO05D003880 2.9e-19 98.6 83 62.7
Solyc03g096760.1 Solanum lycopersicum HOM05D003381 ORTHO05D003880 5.0e-19 97.8 83 67.5
RcHm_v2.0_Chr1g0383321 Rosa chinensis HOM05D003381 ORTHO05D003880 6.6e-19 97.4 84 66.7
HanXRQChr08g0225861 Helianthus annuus HOM05D003381 ORTHO05D003880 1.1e-18 96.7 83 65.1
Phvul.009G040500 Phaseolus vulgaris HOM05D003381 ORTHO05D003880 1.1e-18 96.7 80 67.5
TPR.G35911 Trifolium pratense HOM05D003381 ORTHO05D003880 2.5e-18 95.5 80 66.2
CSS0005275 Camellia sinensis var. sinensis HOM05D003381 ORTHO05D003880 3.3e-18 95.1 79 65.8
Lalb_Chr08g0239391 Lupinus albus HOM05D003381 ORTHO05D003880 3.3e-18 95.1 82 63.4
Sabra15G0000300 Salix brachista HOM05D003381 ORTHO05D003880 3.3e-18 95.1 89 62.9
Ca_16840_v3 Cicer arietinum L. HOM05D003381 ORTHO05D003880 4.3e-18 94.7 80 66.2
Prupe.2G322300 Prunus persica HOM05D003381 ORTHO05D003880 4.3e-18 94.7 84 69.0
Migut.F00967 Erythranthe guttata HOM05D003381 ORTHO05D003880 5.6e-18 94.4 84 64.3
FAN03G2343 Fragaria x ananassa HOM05D003381 ORTHO05D003880 5.6e-18 94.4 84 63.1
Hma1.2p1_0115F.1_g055840 Hydrangea macrophylla HOM05D003381 ORTHO05D003880 7.3e-18 94.0 88 58.0
FAN10G2693 Fragaria x ananassa HOM05D003381 ORTHO05D003880 1.6e-17 92.8 84 63.1
FAN10G4285 Fragaria x ananassa HOM05D003381 ORTHO05D003880 1.6e-17 92.8 84 63.1
CAN.G303.61 Capsicum annuum HOM05D003381 ORTHO05D003880 2.1e-17 92.4 83 67.5
CANSAT21G1431 Cannabis sativa HOM05D003381 ORTHO05D003880 2.8e-17 92.0 96 56.2
Cc02_g00580 Coffea canephora HOM05D003381 ORTHO05D003880 2.8e-17 92.0 87 57.5
Migut.F00966 Erythranthe guttata HOM05D003381 ORTHO05D003880 2.8e-17 92.0 79 62.0
Sopen03g027520 Solanum pennellii HOM05D003381 ORTHO05D003880 2.8e-17 92.0 83 65.1
Medtr3g093400 Medicago truncatula HOM05D003381 ORTHO05D003880 3.6e-17 91.7 85 60.0
Potri.015G000500 Populus trichocarpa HOM05D003381 ORTHO05D003880 4.7e-17 91.3 96 56.2
Solyc03g096780.1 Solanum lycopersicum HOM05D003381 ORTHO05D003880 4.7e-17 91.3 83 65.1
Lalb_Chr11g0067571 Lupinus albus HOM05D003381 ORTHO05D003880 8.0e-17 90.5 82 59.8
Potri.012G004500 Populus trichocarpa HOM05D003381 ORTHO05D003880 8.0e-17 90.5 87 59.8
SalBow4G2332 Salvia bowleyana HOM05D003381 ORTHO05D003880 8.0e-17 90.5 79 64.6
AUR62005946 Chenopodium quinoa HOM05D003381 ORTHO05D003880 1.0e-16 90.1 79 59.5
SGA_v2.0_scaffold351G49675 Striga asiatica HOM05D003381 ORTHO05D003880 1.0e-16 90.1 96 57.3
Dinv17275 Davidia involucrata HOM05D003381 ORTHO05D003880 1.4e-16 89.7 87 59.8
Sed0013785 Sechium edule HOM05D003381 ORTHO05D003880 1.4e-16 89.7 81 63.0
Dinv29190 Davidia involucrata HOM05D003381 ORTHO05D003880 1.8e-16 89.4 78 62.8
SGA_v2.0_scaffold44G16873 Striga asiatica HOM05D003381 ORTHO05D003880 1.8e-16 89.4 81 63.0
HanXRQChr08g0225881 Helianthus annuus HOM05D003381 ORTHO05D003880 2.3e-16 89.0 83 62.7
Ciclev10022951m.g Citrus clementina HOM05D003381 ORTHO05D003880 3.0e-16 88.6 85 58.8
TAR375G0964 Trochodendron aralioides HOM05D003381 ORTHO05D003880 3.0e-16 88.6 86 60.5
Aqoxy5G04393 Aquilegia oxysepala HOM05D003381 ORTHO05D003880 4.0e-16 88.2 79 63.3
Cpa.g.sc3.189 Carica papaya HOM05D003381 ORTHO05D003880 4.0e-16 88.2 74 64.9
TAR374G1397 Trochodendron aralioides HOM05D003381 ORTHO05D003880 5.2e-16 87.8 83 61.4
Manes.01G002300 Manihot esculenta HOM05D003381 ORTHO05D003880 6.8e-16 87.4 83 60.2
Peaxi162Scf00815g00116 Petunia axillaris HOM05D003381 ORTHO05D003880 6.8e-16 87.4 81 64.2
Psat5g070520 Pisum sativum HOM05D003381 ORTHO05D003880 6.8e-16 87.4 92 57.6
CANSAT21G0934 Cannabis sativa HOM05D003381 ORTHO05D003880 8.9e-16 87.0 84 58.3
Sabra12G0000400 Salix brachista HOM05D003381 ORTHO05D003880 8.9e-16 87.0 87 58.6
MD07G1303600 Malus domestica HOM05D003381 ORTHO05D003880 1.2e-15 86.7 84 63.1
HanXRQChr08g0225771 Helianthus annuus HOM05D003381 ORTHO05D003880 1.5e-15 86.3 84 59.5
HanXRQChr08g0225851 Helianthus annuus HOM05D003381 ORTHO05D003880 1.5e-15 86.3 84 59.5
Lalb_Chr04g0252571 Lupinus albus HOM05D003381 ORTHO05D003880 1.5e-15 86.3 80 58.8
PSO675G1709 Papaver somniferum HOM05D003381 ORTHO05D003880 1.5e-15 86.3 86 60.5
PGSC0003DMG400000545 Solanum tuberosum HOM05D003381 ORTHO05D003880 2.0e-15 85.9 83 61.4
PGSC0003DMG400000547 Solanum tuberosum HOM05D003381 ORTHO05D003880 2.0e-15 85.9 86 61.6
Migut.F00119 Erythranthe guttata HOM05D003381 ORTHO05D003880 2.6e-15 85.5 77 59.7
PSO541G0132 Papaver somniferum HOM05D003381 ORTHO05D003880 2.6e-15 85.5 93 58.1
Psat5g070560 Pisum sativum HOM05D003381 ORTHO05D003880 2.6e-15 85.5 80 61.2
Sopen03g027500 Solanum pennellii HOM05D003381 ORTHO05D003880 3.4e-15 85.1 83 61.4
ClCG01G000030 Citrullus lanatus HOM05D003381 ORTHO05D003880 4.4e-15 84.7 83 59.0
Nitab4.5_0002691g0080 Nicotiana tabacum HOM05D003381 ORTHO05D003880 4.4e-15 84.7 83 61.4
EL10Ac3g05129 Beta vulgaris HOM05D003381 ORTHO05D003880 5.8e-15 84.3 84 53.6
Nitab4.5_0002691g0070 Nicotiana tabacum HOM05D003381 ORTHO05D003880 7.5e-15 84.0 83 60.2
Ah.13g071060 Amaranthus hybridus HOM05D003381 ORTHO05D003880 9.8e-15 83.6 95 53.7
Glyma.06G139300 Glycine max HOM05D003381 ORTHO05D003880 1.3e-14 83.2 80 62.5
Ah.13g071070 Amaranthus hybridus HOM05D003381 ORTHO05D003880 1.7e-14 82.8 84 51.2
THA.LOC104798994 Tarenaya hassleriana HOM05D003381 ORTHO05D003880 1.7e-14 82.8 78 61.5
ATR0579G061 Amborella trichopoda HOM05D003381 ORTHO05D003880 2.2e-14 82.4 83 56.6
AL5G29410 Arabidopsis lyrata HOM05D003381 ORTHO05D003880 2.2e-14 82.4 91 54.9
Sc14g0006700 Simmondsia chinensis HOM05D003381 ORTHO05D003880 2.2e-14 82.4 80 57.5
Carub.0005s1591 Capsella rubella HOM05D003381 ORTHO05D003880 2.9e-14 82.0 102 50.0
ECA233G1855 Erigeron canadensis HOM05D003381 ORTHO05D003880 2.9e-14 82.0 84 56.0
Glyma.14G188300 Glycine max HOM05D003381 ORTHO05D003880 2.9e-14 82.0 80 57.5
Nitab4.5_0000115g0190 Nicotiana tabacum HOM05D003381 ORTHO05D003880 2.9e-14 82.0 83 61.4
AT3G49570 Arabidopsis thaliana HOM05D003381 ORTHO05D003880 3.7e-14 81.6 91 54.9
CAN.G65.142 Capsicum annuum HOM05D003381 ORTHO05D003880 3.7e-14 81.6 58 69.0
Glyma.04G225500 Glycine max HOM05D003381 ORTHO05D003880 3.7e-14 81.6 80 61.2
Actinidia34289 Actinidia chinensis HOM05D003381 ORTHO05D003880 4.9e-14 81.3 79 62.0
Carub.0006s2251 Capsella rubella HOM05D003381 ORTHO05D003880 4.9e-14 81.3 78 61.5
AL6G36270 Arabidopsis lyrata HOM05D003381 ORTHO05D003880 6.4e-14 80.9 78 60.3
AUR62005945 Chenopodium quinoa HOM05D003381 ORTHO05D003880 6.4e-14 80.9 84 52.4
Eucgr.K00481 Eucalyptus grandis HOM05D003381 ORTHO05D003880 6.4e-14 80.9 96 53.1
DCAR_010556 Daucus carota HOM05D003381 ORTHO05D003880 8.3e-14 80.5 83 59.0
C02p60110 Brassica napus HOM05D003381 ORTHO05D003880 1.1e-13 80.1 78 60.3
AUR62028119 Chenopodium quinoa HOM05D003381 ORTHO05D003880 1.1e-13 80.1 83 56.6
Thhalv10005368m.g Eutrema salsugineum HOM05D003381 ORTHO05D003880 1.1e-13 80.1 78 61.5
AT5G24660 Arabidopsis thaliana HOM05D003381 ORTHO05D003880 1.4e-13 79.7 78 60.3
BcaC03g17951 Brassica carinata HOM05D003381 ORTHO05D003880 1.4e-13 79.7 78 60.3
BcaC07g39421 Brassica carinata HOM05D003381 ORTHO05D003880 1.4e-13 79.7 100 49.0
BolC2t12066H Brassica oleracea HOM05D003381 ORTHO05D003880 1.4e-13 79.7 78 60.3
BraA02t08981Z Brassica rapa HOM05D003381 ORTHO05D003880 1.4e-13 79.7 78 60.3
CARHR188800 Cardamine hirsuta HOM05D003381 ORTHO05D003880 1.4e-13 79.7 78 60.3
FvH4_7g33340 Fragaria vesca HOM05D003381 ORTHO05D003880 1.4e-13 79.7 84 56.0
MD01G1231600 Malus domestica HOM05D003381 ORTHO05D003880 1.4e-13 79.7 84 59.5
SalBow4G1643 Salvia bowleyana HOM05D003381 ORTHO05D003880 1.4e-13 79.7 72 59.7
Sp2g22730 Schrenkiella parvula HOM05D003381 ORTHO05D003880 1.4e-13 79.7 78 60.3
LjContig00155g0019595 Lotus japonicus HOM05D003381 ORTHO05D003880 1.8e-13 79.3 80 56.2
Phvul.008G187900 Phaseolus vulgaris HOM05D003381 ORTHO05D003880 1.8e-13 79.3 80 55.0
AL6G36260 Arabidopsis lyrata HOM05D003381 ORTHO05D003880 2.4e-13 79.0 78 59.0
Carub.0006s2252 Capsella rubella HOM05D003381 ORTHO05D003880 2.4e-13 79.0 78 59.0
HPP92_008910 Vanilla planifolia HOM05D003381 ORTHO05D003880 2.4e-13 79.0 87 49.4
EL10Ac3g05128 Beta vulgaris HOM05D003381 ORTHO05D003880 3.2e-13 78.6 88 51.1
CSS0002942 Camellia sinensis var. sinensis HOM05D003381 ORTHO05D003880 3.2e-13 78.6 82 58.5
HanXRQChr16g0499781 Helianthus annuus HOM05D003381 ORTHO05D003880 3.2e-13 78.6 81 53.1
TWI81G0192 Tripterygium wilfordii HOM05D003381 ORTHO05D003880 3.2e-13 78.6 82 54.9
AT5G24655 Arabidopsis thaliana HOM05D003381 ORTHO05D003880 4.1e-13 78.2 78 59.0
Oeu063749.1 Olea europaea HOM05D003381 ORTHO05D003880 4.1e-13 78.2 83 56.6
Sp5g12530 Schrenkiella parvula HOM05D003381 ORTHO05D003880 4.1e-13 78.2 102 45.1
C08p24550 Brassica napus HOM05D003381 ORTHO05D003880 5.4e-13 77.8 86 53.5
BolC8t50074H Brassica oleracea HOM05D003381 ORTHO05D003880 5.4e-13 77.8 86 53.5
Lalb_Chr10g0102971 Lupinus albus HOM05D003381 ORTHO05D003880 5.4e-13 77.8 87 52.9
VMungo1309G1451 Vigna mungo HOM05D003381 ORTHO05D003880 5.4e-13 77.8 80 60.0
A06p18160 Brassica napus HOM05D003381 ORTHO05D003880 7.0e-13 77.4 100 48.0
BolC8t50073H Brassica oleracea HOM05D003381 ORTHO05D003880 7.0e-13 77.4 93 53.8
Nitab4.5_0002867g0010 Nicotiana tabacum HOM05D003381 ORTHO05D003880 7.0e-13 77.4 83 59.0
BcaB01g00694 Brassica carinata HOM05D003381 ORTHO05D003880 9.2e-13 77.0 91 51.6
PSO017G3293 Papaver somniferum HOM05D003381 ORTHO05D003880 9.2e-13 77.0 84 51.2
Gohir.A08G106600 Gossypium hirsutum HOM05D003381 ORTHO05D003880 1.2e-12 76.6 81 55.6
Sp5g12540 Schrenkiella parvula HOM05D003381 ORTHO05D003880 1.2e-12 76.6 79 57.0
Aa31LG11G3910 Aethionema arabicum HOM05D003381 ORTHO05D003880 1.6e-12 76.3 90 53.3
A06p35480 Brassica napus HOM05D003381 ORTHO05D003880 1.6e-12 76.3 78 59.0
BraA06t26471Z Brassica rapa HOM05D003381 ORTHO05D003880 1.6e-12 76.3 78 59.0
AL5G29420 Arabidopsis lyrata HOM05D003381 ORTHO05D003880 2.0e-12 75.9 91 51.6
BcaC07g39418 Brassica carinata HOM05D003381 ORTHO05D003880 2.0e-12 75.9 103 49.5
BcaNung02004 Brassica carinata HOM05D003381 ORTHO05D003880 2.0e-12 75.9 78 59.0
C07p43060 Brassica napus HOM05D003381 ORTHO05D003880 2.0e-12 75.9 78 59.0
BolC7t44833H Brassica oleracea HOM05D003381 ORTHO05D003880 2.0e-12 75.9 78 59.0
CARHR158590 Cardamine hirsuta HOM05D003381 ORTHO05D003880 2.0e-12 75.9 91 51.6
Peaxi162Scf00685g10014 Petunia axillaris HOM05D003381 ORTHO05D003880 2.0e-12 75.9 58 63.8
A06p18190 Brassica napus HOM05D003381 ORTHO05D003880 2.7e-12 75.5 93 52.7
BraA06t24903Z Brassica rapa HOM05D003381 ORTHO05D003880 2.7e-12 75.5 93 52.7
Carub.0005s1590 Capsella rubella HOM05D003381 ORTHO05D003880 2.7e-12 75.5 86 52.3
TWI81G0266 Tripterygium wilfordii HOM05D003381 ORTHO05D003880 2.7e-12 75.5 87 52.9
CsaV3_5G000160 Cucumis sativus L. HOM05D003381 ORTHO05D003880 3.5e-12 75.1 83 56.6
Thhalv10010815m.g Eutrema salsugineum HOM05D003381 ORTHO05D003880 3.5e-12 75.1 86 53.5
PGSC0003DMG400000546 Solanum tuberosum HOM05D003381 ORTHO05D003880 4.6e-12 74.7 83 57.8
BcaC07g39419 Brassica carinata HOM05D003381 ORTHO05D003880 7.8e-12 73.9 83 53.0
Oeu017357.1 Olea europaea HOM05D003381 ORTHO05D003880 7.8e-12 73.9 84 54.8
Haze_00337 Corylus avellana HOM05D003381 ORTHO05D003880 1.0e-11 73.6 75 57.3
PGR142G3642 Punica granatum HOM05D003381 ORTHO05D003880 1.3e-11 73.2 94 48.9
Solyc03g096770.1 Solanum lycopersicum HOM05D003381 ORTHO05D003880 1.7e-11 72.8 83 57.8
Zm00001eb043810 Zea mays HOM05D003381 ORTHO05D003880 1.7e-11 72.8 77 53.2
Oeu055427.1 Olea europaea HOM05D003381 ORTHO05D003880 2.3e-11 72.4 58 65.5
ECA232G1694 Erigeron canadensis HOM05D003381 ORTHO05D003880 3.9e-11 71.6 65 53.8
Solyc06g072990.1 Solanum lycopersicum HOM05D003381 ORTHO05D003880 3.9e-11 71.6 83 54.2
COL.COLO4_14402 Corchorus olitorius HOM05D003381 ORTHO05D003880 5.0e-11 71.2 54 64.8
Gohir.A08G106800 Gossypium hirsutum HOM05D003381 ORTHO05D003880 8.6e-11 70.5 81 53.1
Lsat_1_v5_gn_8_4301 Lactuca sativa HOM05D003381 ORTHO05D003880 1.9e-10 69.3 84 50.0
Nn3g18090 Nelumbo nucifera HOM05D003381 ORTHO05D003880 2.5e-10 68.9 75 56.0
Zm00001eb220550 Zea mays HOM05D003381 ORTHO05D003880 2.5e-10 68.9 79 50.6
Eucgr.K00482 Eucalyptus grandis HOM05D003381 ORTHO05D003880 3.3e-10 68.6 89 52.8
Eucgr.K00530 Eucalyptus grandis HOM05D003381 ORTHO05D003880 3.3e-10 68.6 89 52.8
Gohir.D08G117850 Gossypium hirsutum HOM05D003381 ORTHO05D003880 3.3e-10 68.6 81 53.1
Gohir.D08G117900 Gossypium hirsutum HOM05D003381 ORTHO05D003880 3.3e-10 68.6 81 51.9
Gorai.004G126400 Gossypium raimondii HOM05D003381 ORTHO05D003880 3.3e-10 68.6 81 53.1
Gorai.004G126500 Gossypium raimondii HOM05D003381 ORTHO05D003880 3.3e-10 68.6 81 51.9
MBI04_g09823_MAGBIO Magnolia biondii HOM05D003381 ORTHO05D003880 5.6e-10 67.8 81 54.3
BcaC09g49963 Brassica carinata HOM05D003381 ORTHO05D003880 7.3e-10 67.4 55 61.8
Duzib084G1005 Durio zibethinus HOM05D003381 ORTHO05D003880 9.5e-10 67.0 83 50.6
Lsat_1_v5_gn_2_3421 Lactuca sativa HOM05D003381 ORTHO05D003880 1.2e-09 66.6 83 50.6
A02p40150 Brassica napus HOM05D003381 ORTHO05D003880 1.6e-09 66.2 62 64.5
SEGI_09109 Sequoiadendron giganteum HOM05D003381 ORTHO05D003880 6.2e-09 64.3 95 46.3
Os10g0509600 Oryza sativa ssp. japonica HOM05D003381 ORTHO05D003880 8.0e-09 63.9 89 46.1
SEGI_37007 Sequoiadendron giganteum HOM05D003381 ORTHO05D003880 8.0e-09 63.9 83 48.2
vmacro06476 Vaccinium macrocarpon HOM05D003381 ORTHO05D003880 8.0e-09 63.9 79 53.2
Lsat_1_v5_gn_8_4241 Lactuca sativa HOM05D003381 ORTHO05D003880 1.4e-08 63.2 83 49.4
Aa31LG4G18060 Aethionema arabicum HOM05D003381 ORTHO05D003880 1.8e-08 62.8 79 49.4
COL.COLO4_14401 Corchorus olitorius HOM05D003381 ORTHO05D003880 2.3e-08 62.4 90 43.3
SEGI_32370 Sequoiadendron giganteum HOM05D003381 ORTHO05D003880 3.1e-08 62.0 95 46.3
CARHR158580 Cardamine hirsuta HOM05D003381 ORTHO05D003880 6.8e-08 60.8 91 46.2
QL09p005975 Quercus lobata HOM05D003381 ORTHO05D003880 8.9e-08 60.5 81 46.9
QL11p009417 Quercus lobata HOM05D003381 ORTHO05D003880 8.9e-08 60.5 78 51.3
Peaxi162Scf00542g00013 Petunia axillaris HOM05D003381 ORTHO05D003880 1.2e-07 60.1 55 65.5
AT3G49580 Arabidopsis thaliana HOM05D003381 ORTHO05D003880 9.8e-07 57.0 74 50.0
CDE09G1369 Ceratophyllum demersum HOM05D001765 ORTHO05D003527 1.3e-06 56.6 79 45.6
SEGI_32433 Sequoiadendron giganteum HOM05D003381 ORTHO05D003880 1.3e-06 56.6 95 42.1
CDE04G0378 Ceratophyllum demersum HOM05D003381 ORTHO05D003880 2.2e-06 55.8 57 56.1
Os10g0509401 Oryza sativa ssp. japonica HOM05D003381 ORTHO05D003880 2.2e-06 55.8 96 41.7
vmacro06477 Vaccinium macrocarpon HOM05D003381 ORTHO05D003880 2.9e-06 55.5 84 45.2


User provided reference genes

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