Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_60.g25616 Utricularia gibba HOM05D009933 ORTHO05D012084 4.8e-94 347.8 174 100.0
Migut.G00780 Erythranthe guttata HOM05D009933 ORTHO05D012084 1.3e-27 127.1 163 38.0
SGA_v2.0_scaffold74G24613 Striga asiatica HOM05D009933 ORTHO05D012084 1.8e-24 116.7 152 38.8
Oeu043379.1 Olea europaea HOM05D009933 ORTHO05D012084 7.5e-23 111.3 167 35.3
SGA_v2.0_scaffold74G24609 Striga asiatica HOM05D009933 ORTHO05D009712 1.6e-20 103.6 161 36.0
SGA_v2.0_scaffold74G24619 Striga asiatica HOM05D009933 ORTHO05D012084 2.7e-20 102.8 118 44.1
Oeu043429.1 Olea europaea HOM05D009933 ORTHO05D012084 3.5e-20 102.4 162 32.7
SalBow7G3223 Salvia bowleyana HOM05D009933 ORTHO05D012084 1.0e-19 100.9 146 34.9
SalBow7G3334 Salvia bowleyana HOM05D000059 ORTHO05D012084 1.0e-19 100.9 173 32.9
SalBow7G2832 Salvia bowleyana HOM05D009933 ORTHO05D012084 8.6e-19 97.8 146 33.6
Migut.I00636 Erythranthe guttata HOM05D009933 ORTHO05D012084 2.5e-18 96.3 172 33.1
Peaxi162Scf01623g00014 Petunia axillaris HOM05D009933 ORTHO05D012084 1.2e-17 94.0 161 34.2
Solyc08g016120.1 Solanum lycopersicum HOM05D009933 ORTHO05D012084 1.2e-17 94.0 170 32.9
Solyc08g016100.1 Solanum lycopersicum HOM05D009933 ORTHO05D012084 1.6e-17 93.6 168 32.7
PGSC0003DMG400003969 Solanum tuberosum HOM05D009933 ORTHO05D012084 8.0e-17 91.3 176 33.0
Solyc11g005470.1 Solanum lycopersicum HOM05D009933 ORTHO05D012084 4.0e-16 89.0 176 31.8
Solyc08g016110.1 Solanum lycopersicum HOM05D009933 ORTHO05D012084 6.8e-16 88.2 170 31.8
PGSC0003DMG400038811 Solanum tuberosum HOM05D009933 ORTHO05D012084 2.0e-15 86.7 168 33.9
Oeu060879.1 Olea europaea HOM05D009933 ORTHO05D012084 7.5e-15 84.7 144 33.3
CAN.G676.49 Capsicum annuum HOM05D009933 ORTHO05D012084 8.3e-14 81.3 172 30.2
PGSC0003DMG400003994 Solanum tuberosum HOM05D009933 ORTHO05D012084 1.8e-13 80.1 147 34.0
SGA_v2.0_scaffold74G24614 Striga asiatica HOM05D008339 ORTHO05D009712 2.4e-13 79.7 113 35.4
Solyc04g015510.1 Solanum lycopersicum HOM05D009933 ORTHO05D012084 3.5e-12 75.9 174 31.6
Ciclev10013648m.g Citrus clementina HOM05D008339 ORTHO05D009712 1.0e-11 74.3 154 28.6
Rhsim11G0099000 Rhododendron simsii HOM05D008339 ORTHO05D009712 1.7e-11 73.6 175 27.4
ClCG02G014760 Citrullus lanatus HOM05D008339 ORTHO05D009712 5.6e-10 68.6 165 23.0
THA.LOC104816853 Tarenaya hassleriana HOM05D009911 ORTHO05D009712 2.8e-09 66.2 165 29.1
Nitab4.5_0002441g0060 Nicotiana tabacum HOM05D009933 ORTHO05D012084 1.1e-08 64.3 113 29.2
MD12G1203500 Malus domestica HOM05D008339 ORTHO05D009712 1.8e-08 63.5 161 26.7
Cpa.g.sc48.196 Carica papaya HOM05D008339 ORTHO05D009712 2.3e-08 63.2 169 27.8
Sc02g0000800 Simmondsia chinensis HOM05D009933 ORTHO05D012084 4.0e-08 62.4 174 25.3
MD12G1203400 Malus domestica HOM05D008339 ORTHO05D009712 8.9e-08 61.2 175 25.7
Prupe.6G309300 Prunus persica HOM05D008339 ORTHO05D009712 8.9e-08 61.2 162 24.1
QL07p004956 Quercus lobata HOM05D011459 ORTHO05D013640 8.9e-08 61.2 143 28.7
Sp1g07970 Schrenkiella parvula HOM05D013394 ORTHO05D009712 8.9e-08 61.2 175 25.7
TWI12G1182 Tripterygium wilfordii HOM05D008339 ORTHO05D009712 8.9e-08 61.2 175 24.6
FvH4_6g07980 Fragaria vesca HOM05D008339 ORTHO05D009712 2.0e-07 60.1 137 25.5
FAN14G5780 Fragaria x ananassa HOM05D008339 ORTHO05D009712 2.0e-07 60.1 137 25.5
MD12G1203300 Malus domestica HOM05D008339 ORTHO05D009712 2.0e-07 60.1 173 25.4
RcHm_v2.0_Chr3g0457691 Rosa chinensis HOM05D008339 ORTHO05D009712 4.4e-07 58.9 169 23.7
Sabra13G0004800 Salix brachista HOM05D008339 ORTHO05D009712 4.4e-07 58.9 175 26.9
PGR004G1038 Punica granatum HOM05D008339 ORTHO05D009712 5.8e-07 58.5 177 24.9
Sabra05G0018000 Salix brachista HOM05D008339 ORTHO05D009712 5.8e-07 58.5 173 22.5
AL1G19880 Arabidopsis lyrata HOM05D009911 ORTHO05D009712 7.5e-07 58.2 164 25.6
Haze_04054 Corylus avellana HOM05D008339 ORTHO05D009712 9.8e-07 57.8 153 25.5
AT1G50340 Arabidopsis thaliana HOM05D008385 ORTHO05D010806 2.2e-06 56.6 123 26.8
FAN02G4119 Fragaria x ananassa HOM05D008339 ORTHO05D009712 2.9e-06 56.2 143 23.1
Potri.005G007100 Populus trichocarpa HOM05D008339 ORTHO05D009712 3.7e-06 55.8 162 21.6
Thecc.05G309700 Theobroma cacao HOM05D008339 ORTHO05D009712 3.7e-06 55.8 151 23.8
CiPaw.01G136000 Carya illinoinensis HOM05D001578 ORTHO05D001207 6.4e-06 55.1 133 27.1
CsaV3_2G007240 Cucumis sativus L. HOM05D008339 ORTHO05D007109 6.4e-06 55.1 118 26.3


User provided reference genes

Program Settings