Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_60.g25592 Utricularia gibba HOM05D006899 ORTHO05D008566 4.3e-81 304.7 163 100.0
TWI59G0652 Tripterygium wilfordii HOM05D006899 ORTHO05D008566 5.9e-30 134.8 151 57.6
Potri.002G058000 Populus trichocarpa HOM05D006899 ORTHO05D008566 1.1e-28 130.6 156 52.6
Eucgr.A02015 Eucalyptus grandis HOM05D006899 ORTHO05D008566 2.5e-28 129.4 164 53.0
MSTRG.12841 Avicennia marina HOM05D006899 ORTHO05D008566 3.3e-28 129.0 130 61.5
Sabra02G0047300 Salix brachista HOM05D006899 ORTHO05D008566 4.2e-28 128.6 163 54.0
MD09G1149700 Malus domestica HOM05D006899 ORTHO05D008566 7.2e-28 127.9 135 61.5
FvH4_6g38570 Fragaria vesca HOM05D006899 ORTHO05D008566 2.8e-27 125.9 159 52.8
arahy.Tifrunner.gnm1.ann1.226PX6 Arachis hypogaea HOM05D006899 ORTHO05D008566 3.6e-27 125.6 131 55.0
FAN09G4704 Fragaria x ananassa HOM05D006899 ORTHO05D008566 3.6e-27 125.6 155 55.5
Nitab4.5_0002251g0050 Nicotiana tabacum HOM05D006899 ORTHO05D008566 3.6e-27 125.6 162 51.9
Peaxi162Scf00111g00221 Petunia axillaris HOM05D006899 ORTHO05D008566 4.7e-27 125.2 138 58.0
arahy.Tifrunner.gnm1.ann1.SNQ1P9 Arachis hypogaea HOM05D006899 ORTHO05D008566 6.1e-27 124.8 131 55.0
Oeu013822.1 Olea europaea HOM05D006899 ORTHO05D008566 6.1e-27 124.8 134 59.0
FAN05G4631 Fragaria x ananassa HOM05D006899 ORTHO05D008566 8.0e-27 124.4 159 52.2
Nitab4.5_0001883g0020 Nicotiana tabacum HOM05D006899 ORTHO05D008566 1.0e-26 124.0 172 51.2
PGSC0003DMG400017304 Solanum tuberosum HOM05D006899 ORTHO05D008566 1.4e-26 123.6 125 61.6
VMungo0647G1903 Vigna mungo HOM05D006899 ORTHO05D008566 1.4e-26 123.6 161 49.1
Oeu020934.1 Olea europaea HOM05D006899 ORTHO05D008566 1.8e-26 123.2 134 58.2
CANSAT64G2357 Cannabis sativa HOM05D006899 ORTHO05D008566 2.3e-26 122.9 123 57.7
Cc05_g09700 Coffea canephora HOM05D006899 ORTHO05D008566 2.3e-26 122.9 178 49.4
Haze_13530 Corylus avellana HOM05D006899 ORTHO05D008566 2.3e-26 122.9 127 59.1
Manes.10G088300 Manihot esculenta HOM05D006899 ORTHO05D008566 2.3e-26 122.9 128 56.2
QL08p044873 Quercus lobata HOM05D006899 ORTHO05D008566 2.3e-26 122.9 133 57.1
Solyc07g056240.3 Solanum lycopersicum HOM05D006899 ORTHO05D008566 2.3e-26 122.9 125 60.8
Prupe.3G176400 Prunus persica HOM05D006899 ORTHO05D008566 3.0e-26 122.5 135 58.5
vmacro09192 Vaccinium macrocarpon HOM05D006899 ORTHO05D008566 3.0e-26 122.5 139 59.0
Medtr5g091190 Medicago truncatula HOM05D006899 ORTHO05D008566 4.0e-26 122.1 150 52.0
Phvul.008G193700 Phaseolus vulgaris HOM05D006899 ORTHO05D008566 4.0e-26 122.1 159 45.9
Sopen07g029600 Solanum pennellii HOM05D006899 ORTHO05D008566 4.0e-26 122.1 134 59.7
Potri.005G204200 Populus trichocarpa HOM05D006899 ORTHO05D008566 5.2e-26 121.7 174 48.9
Cfa023072 Carpinus fangiana HOM05D006899 ORTHO05D008566 6.8e-26 121.3 154 53.2
FAN02G3475 Fragaria x ananassa HOM05D006899 ORTHO05D008566 8.9e-26 120.9 124 61.3
FAN14G2046 Fragaria x ananassa HOM05D006899 ORTHO05D008566 8.9e-26 120.9 124 61.3
RcHm_v2.0_Chr2g0151981 Rosa chinensis HOM05D006899 ORTHO05D008566 8.9e-26 120.9 155 53.5
TPR.G12679 Trifolium pratense HOM05D006899 ORTHO05D008566 8.9e-26 120.9 171 48.0
Cpa.g.sc50.104 Carica papaya HOM05D006899 ORTHO05D008566 1.2e-25 120.6 125 57.6
AUR62015134 Chenopodium quinoa HOM05D006899 ORTHO05D008566 1.2e-25 120.6 195 43.6
AUR62017595 Chenopodium quinoa HOM05D006899 ORTHO05D008566 1.2e-25 120.6 195 42.6
Glyma.14G029700 Glycine max HOM05D006899 ORTHO05D008566 1.2e-25 120.6 152 49.3
Gorai.001G092300 Gossypium raimondii HOM05D006899 ORTHO05D008566 1.2e-25 120.6 151 53.6
LjContig00049g0021241 Lotus japonicus HOM05D006899 ORTHO05D008566 1.2e-25 120.6 130 57.7
Gohir.D07G086300 Gossypium hirsutum HOM05D006899 ORTHO05D008566 1.5e-25 120.2 151 53.0
MD17G1136600 Malus domestica HOM05D006899 ORTHO05D008566 1.5e-25 120.2 135 58.5
Rhsim04G0081600 Rhododendron simsii HOM05D006899 ORTHO05D008566 1.5e-25 120.2 134 58.2
CDE05G0801 Ceratophyllum demersum HOM05D006899 ORTHO05D008566 2.0e-25 119.8 169 49.7
Atru.chr6.2058 Acer truncatum HOM05D006899 ORTHO05D008566 2.6e-25 119.4 119 60.5
PGR042G1005 Punica granatum HOM05D006899 ORTHO05D008566 2.6e-25 119.4 135 54.8
Nn4g26539 Nelumbo nucifera HOM05D006899 ORTHO05D008566 4.4e-25 118.6 138 55.8
EL10Ac9g22843 Beta vulgaris HOM05D006899 ORTHO05D008566 5.7e-25 118.2 115 58.3
CiPaw.04G138700 Carya illinoinensis HOM05D006899 ORTHO05D008566 5.7e-25 118.2 148 55.4
Ciclev10032884m.g Citrus clementina HOM05D006899 ORTHO05D008566 5.7e-25 118.2 121 57.9
COL.COLO4_08896 Corchorus olitorius HOM05D006899 ORTHO05D008566 5.7e-25 118.2 167 50.3
Glyma.02G285100 Glycine max HOM05D006899 ORTHO05D008566 5.7e-25 118.2 153 49.0
Gohir.A07G080700 Gossypium hirsutum HOM05D006899 ORTHO05D008566 5.7e-25 118.2 151 52.3
Sed0025977 Sechium edule HOM05D006899 ORTHO05D008566 5.7e-25 118.2 130 53.1
Actinidia03641 Actinidia chinensis HOM05D006899 ORTHO05D008566 9.8e-25 117.5 126 57.9
SalBow7G1887 Salvia bowleyana HOM05D006899 ORTHO05D008566 9.8e-25 117.5 131 56.5
GSVIVG01020847001 Vitis vinifera HOM05D006899 ORTHO05D008566 9.8e-25 117.5 159 50.3
MELO3C026968.2 Cucumis melo HOM05D006899 ORTHO05D008566 1.7e-24 116.7 174 47.7
AT2G42975 Arabidopsis thaliana HOM05D006899 ORTHO05D008566 2.8e-24 115.9 117 59.8
Thecc.01G170200 Theobroma cacao HOM05D006899 ORTHO05D008566 2.8e-24 115.9 158 51.9
TAR627G0648 Trochodendron aralioides HOM05D006899 ORTHO05D008566 2.8e-24 115.9 153 50.3
CsaV3_4G031920 Cucumis sativus L. HOM05D006899 ORTHO05D008566 3.7e-24 115.5 161 48.4
Sp4g25100 Schrenkiella parvula HOM05D006899 ORTHO05D008566 3.7e-24 115.5 133 55.6
Hund24233 Selenicereus undatus HOM05D006899 ORTHO05D008566 3.7e-24 115.5 125 56.8
ClCG11G016470 Citrullus lanatus HOM05D006899 ORTHO05D008566 4.9e-24 115.2 119 56.3
Aa31LG1G24750 Aethionema arabicum HOM05D006899 ORTHO05D008566 1.1e-23 114.0 136 54.4
AL4G41610 Arabidopsis lyrata HOM05D006899 ORTHO05D008566 1.4e-23 113.6 117 58.1
BraA04t18701Z Brassica rapa HOM05D006899 ORTHO05D008566 3.2e-23 112.5 131 56.5
Ah.01g013620 Amaranthus hybridus HOM05D006899 ORTHO05D008566 5.4e-23 111.7 92 63.0
Carub.0004s2544 Capsella rubella HOM05D006899 ORTHO05D008566 7.0e-23 111.3 119 58.0
BcaB06g29274 Brassica carinata HOM05D006899 ORTHO05D008566 9.2e-23 110.9 122 55.7
BcaC02g07213 Brassica carinata HOM05D006899 ORTHO05D008566 9.2e-23 110.9 119 56.3
C04p70000 Brassica napus HOM05D006899 ORTHO05D008566 9.2e-23 110.9 119 56.3
BolC4t28500H Brassica oleracea HOM05D006899 ORTHO05D008566 9.2e-23 110.9 119 56.3
Sc13g0007020 Simmondsia chinensis HOM05D006899 ORTHO05D008566 9.2e-23 110.9 157 48.4
BNapus_Darmor_BZH_scaffold_64p00160 Brassica napus HOM05D006899 ORTHO05D008566 1.6e-22 110.2 118 56.8
Thhalv10017256m.g Eutrema salsugineum HOM05D006899 ORTHO05D008566 1.6e-22 110.2 121 55.4
Migut.E01772 Erythranthe guttata HOM05D006899 ORTHO05D008566 2.0e-22 109.8 149 49.0
MBI10_g21113_MAGBIO Magnolia biondii HOM05D006899 ORTHO05D008566 2.7e-22 109.4 124 58.1
SGA_v2.0_scaffold4G02123 Striga asiatica HOM05D006899 ORTHO05D008566 2.7e-22 109.4 157 48.4
Lalb_Chr04g0248871 Lupinus albus HOM05D006899 ORTHO05D008566 3.5e-22 109.0 90 66.7
THA.LOC104803370 Tarenaya hassleriana HOM05D006899 ORTHO05D008566 5.9e-22 108.2 121 57.0
Duzib138G0065 Durio zibethinus HOM05D006899 ORTHO05D008566 7.8e-22 107.8 133 55.6
HanXRQChr17g0554721 Helianthus annuus HOM05D006899 ORTHO05D008566 7.8e-22 107.8 125 55.2
THA.LOC104802283 Tarenaya hassleriana HOM05D006899 ORTHO05D008566 7.8e-22 107.8 149 48.3
CARHR138030 Cardamine hirsuta HOM05D006899 ORTHO05D008566 1.0e-21 107.5 124 55.6
Lj1P601T16 Lonicera japonica HOM05D006899 ORTHO05D008566 1.3e-21 107.1 90 65.6
ECA233G0523 Erigeron canadensis HOM05D006899 ORTHO05D008566 3.9e-21 105.5 130 55.4
PSO478G1301 Papaver somniferum HOM05D006899 ORTHO05D008566 3.9e-21 105.5 125 54.4
PSO675G8667 Papaver somniferum HOM05D006899 ORTHO05D008566 6.6e-21 104.8 125 54.4
PSO541G6147 Papaver somniferum HOM05D006899 ORTHO05D008566 8.6e-21 104.4 124 55.6
Aqoxy1G02918 Aquilegia oxysepala HOM05D006899 ORTHO05D008566 1.5e-20 103.6 132 51.5
Lsat_1_v5_gn_8_137860 Lactuca sativa HOM05D006899 ORTHO05D008566 9.5e-20 100.9 122 52.5
CSS0032532 Camellia sinensis var. sinensis HOM05D006899 ORTHO05D008566 1.2e-19 100.5 143 51.7
HPP92_010055 Vanilla planifolia HOM05D006899 ORTHO05D008566 1.2e-19 100.5 116 52.6
Os01g0666600 Oryza sativa ssp. japonica HOM05D006899 ORTHO05D008566 4.7e-19 98.6 159 43.4
ATR0585G139 Amborella trichopoda HOM05D006899 ORTHO05D008566 1.4e-18 97.1 91 63.7
Duzib133G1045 Durio zibethinus HOM05D006899 ORTHO05D008566 1.8e-18 96.7 94 55.3
Zm00001eb157430 Zea mays HOM05D006899 ORTHO05D008566 1.2e-17 94.0 163 41.7
Dinv09142 Davidia involucrata HOM05D006899 ORTHO05D008566 1.5e-17 93.6 108 53.7
Pp3c13_6560 Physcomitrium patens HOM05D006899 ORTHO05D008566 2.2e-16 89.7 117 48.7
Nitab4.5_0004243g0030 Nicotiana tabacum HOM05D006899 ORTHO05D008566 5.4e-15 85.1 89 58.4
Nitab4.5_0009604g0020 Nicotiana tabacum HOM05D006899 ORTHO05D008566 7.8e-14 81.3 84 59.5
AagrBONN_evm.TU.Sc2ySwM_368.298 Anthoceros agrestis HOM05D006899 ORTHO05D008566 1.3e-13 80.5 142 36.6
Mapoly0120s0054 Marchantia polymorpha HOM05D006899 ORTHO05D008566 3.0e-13 79.3 142 42.3
CSS0025344 Camellia sinensis var. sinensis HOM05D006899 ORTHO05D008566 6.6e-13 78.2 143 44.1
Nitab4.5_0004950g0010 Nicotiana tabacum HOM05D006899 ORTHO05D008566 8.6e-13 77.8 84 58.3
Hund24244 Selenicereus undatus HOM05D006899 ORTHO05D008566 2.1e-11 73.2 94 52.1
SMO353G0201 Selaginella moellendorffii HOM05D006899 ORTHO05D008566 4.7e-11 72.0 93 47.3
Medtr5g016040 Medicago truncatula HOM05D006899 ORTHO05D008566 9.8e-09 64.3 75 50.7
Nitab4.5_0002251g0080 Nicotiana tabacum HOM05D006899 ORTHO05D008566 6.0e-06 55.1 84 46.4


User provided reference genes

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