Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_60.g25575 Utricularia gibba HOM05D006498 ORTHO05D006377 3.1e-235 818.1 430 100.0
MSTRG.17962 Avicennia marina HOM05D006498 ORTHO05D006377 3.1e-70 270.0 495 40.4
SGA_v2.0_scaffold95G28702 Striga asiatica HOM05D006498 ORTHO05D006377 1.9e-67 260.8 463 41.7
SalBow3G4321 Salvia bowleyana HOM05D006498 ORTHO05D006377 2.5e-67 260.4 451 43.0
Migut.N00676 Erythranthe guttata HOM05D006498 ORTHO05D006377 3.6e-58 229.9 443 41.8
VMungo1215G1417 Vigna mungo HOM05D006498 ORTHO05D006377 8.0e-58 228.8 399 41.6
arahy.Tifrunner.gnm1.ann1.YNM2K2 Arachis hypogaea HOM05D006498 ORTHO05D006377 5.9e-53 212.6 337 45.7
CSS0012471 Camellia sinensis var. sinensis HOM05D006498 ORTHO05D006377 1.3e-52 211.5 473 36.8
Phvul.003G140900 Phaseolus vulgaris HOM05D006498 ORTHO05D006377 3.8e-52 209.9 347 43.8
Haze_22031 Corylus avellana HOM05D006498 ORTHO05D006377 6.5e-52 209.1 439 40.1
Cc01_g15950 Coffea canephora HOM05D006498 ORTHO05D006377 2.5e-51 207.2 442 39.8
TWI34G1139 Tripterygium wilfordii HOM05D006498 ORTHO05D006377 1.2e-50 204.9 444 36.0
Ca_21256_v3 Cicer arietinum L. HOM05D006498 ORTHO05D006377 2.7e-50 203.8 442 37.3
TWI32G0168 Tripterygium wilfordii HOM05D006498 ORTHO05D006377 2.7e-50 203.8 444 36.3
Duzib150G1211 Durio zibethinus HOM05D006498 ORTHO05D006377 6.1e-50 202.6 449 36.1
FAN17G1293 Fragaria x ananassa HOM05D006498 ORTHO05D006377 1.8e-49 201.1 451 38.1
arahy.Tifrunner.gnm1.ann1.XIUU7W Arachis hypogaea HOM05D006498 ORTHO05D006377 3.0e-49 200.3 335 45.1
Actinidia23350 Actinidia chinensis HOM05D006498 ORTHO05D006377 8.8e-49 198.7 465 37.4
Medtr4g127350 Medicago truncatula HOM05D006498 ORTHO05D006377 2.6e-48 197.2 377 40.1
FAN12G3360 Fragaria x ananassa HOM05D006498 ORTHO05D006377 3.4e-48 196.8 357 42.3
THA.LOC104820009 Tarenaya hassleriana HOM05D006498 ORTHO05D006377 5.7e-48 196.1 449 38.3
Sc18g0007220 Simmondsia chinensis HOM05D006498 ORTHO05D006377 7.5e-48 195.7 356 41.0
Dinv28799 Davidia involucrata HOM05D006498 ORTHO05D006377 9.8e-48 195.3 285 44.2
Cfa013457 Carpinus fangiana HOM05D006498 ORTHO05D006377 1.3e-47 194.9 440 39.3
Glyma.13G101000 Glycine max HOM05D006498 ORTHO05D006377 1.3e-47 194.9 322 40.1
FvH4_4g07150 Fragaria vesca HOM05D006498 ORTHO05D006377 2.2e-47 194.1 436 38.8
Hma1.2p1_0491F.1_g164630 Hydrangea macrophylla HOM05D006498 ORTHO05D006377 2.8e-47 193.7 334 41.3
Prupe.1G074500 Prunus persica HOM05D006498 ORTHO05D006377 4.8e-47 193.0 458 37.3
Oeu003665.1 Olea europaea HOM05D006498 ORTHO05D006377 6.3e-47 192.6 489 35.4
Thecc.09G186800 Theobroma cacao HOM05D006498 ORTHO05D006377 8.3e-47 192.2 388 38.7
Gohir.D13G212600 Gossypium hirsutum HOM05D006498 ORTHO05D006377 1.1e-46 191.8 391 37.6
Gorai.013G243000 Gossypium raimondii HOM05D006498 ORTHO05D006377 1.1e-46 191.8 391 37.6
Peaxi162Scf00235g00219 Petunia axillaris HOM05D006498 ORTHO05D006377 1.6e-45 188.0 436 37.2
CiPaw.07G197600 Carya illinoinensis HOM05D006498 ORTHO05D006377 2.0e-45 187.6 441 36.1
Eucgr.C00107 Eucalyptus grandis HOM05D006498 ORTHO05D006377 2.7e-45 187.2 345 41.4
Lj4g0022386 Lotus japonicus HOM05D006498 ORTHO05D006377 3.5e-45 186.8 341 40.5
GSVIVG01029313001 Vitis vinifera HOM05D006498 ORTHO05D006377 5.9e-45 186.0 459 37.3
Lsat_1_v5_gn_9_16541 Lactuca sativa HOM05D006498 ORTHO05D006377 7.7e-45 185.7 480 34.8
Nn4g25125 Nelumbo nucifera HOM05D006498 ORTHO05D006377 1.0e-44 185.3 328 40.9
CAN.G844.1 Capsicum annuum HOM05D006498 ORTHO05D006377 2.2e-44 184.1 451 37.5
Aa31LG8G16310 Aethionema arabicum HOM05D006498 ORTHO05D006377 2.9e-44 183.7 327 41.3
Ciclev10008415m.g Citrus clementina HOM05D006498 ORTHO05D006377 5.0e-44 183.0 350 39.4
Gohir.A13G208200 Gossypium hirsutum HOM05D006498 ORTHO05D006377 5.0e-44 183.0 351 37.3
PGR142G3062 Punica granatum HOM05D006498 ORTHO05D006377 6.5e-44 182.6 456 34.6
PGR142G3622 Punica granatum HOM05D006498 ORTHO05D006377 6.5e-44 182.6 456 34.6
CANSAT11G0487 Cannabis sativa HOM05D006498 ORTHO05D006377 1.1e-43 181.8 329 40.1
MD13G1239600 Malus domestica HOM05D006498 ORTHO05D006377 1.9e-43 181.0 452 35.4
Nitab4.5_0005686g0030 Nicotiana tabacum HOM05D006498 ORTHO05D006377 1.9e-43 181.0 473 35.5
Manes.14G159400 Manihot esculenta HOM05D006498 ORTHO05D006377 2.5e-43 180.6 449 37.4
Psat0s3389g0200 Pisum sativum HOM05D006498 ORTHO05D006377 2.5e-43 180.6 318 40.3
HanXRQChr07g0190541 Helianthus annuus HOM05D006498 ORTHO05D006377 3.2e-43 180.3 432 36.3
Nitab4.5_0000038g0230 Nicotiana tabacum HOM05D006498 ORTHO05D006377 3.2e-43 180.3 464 36.2
Sopen09g019810 Solanum pennellii HOM05D006498 ORTHO05D006377 4.2e-43 179.9 328 42.4
Atru.chr7.955 Acer truncatum HOM05D006498 ORTHO05D006377 7.2e-43 179.1 437 35.7
RcHm_v2.0_Chr4g0399301 Rosa chinensis HOM05D006498 ORTHO05D006377 7.2e-43 179.1 344 39.8
CARHR109730 Cardamine hirsuta HOM05D006498 ORTHO05D006377 6.1e-42 176.0 368 39.4
FAN22G0654 Fragaria x ananassa HOM05D006498 ORTHO05D006377 6.1e-42 176.0 487 34.5
Aqoxy7G02850 Aquilegia oxysepala HOM05D006498 ORTHO05D006377 1.0e-41 175.3 461 34.5
AT2G19270 Arabidopsis thaliana HOM05D006498 ORTHO05D006377 1.0e-41 175.3 447 37.6
Hma1.2p1_0491F.1_g164640 Hydrangea macrophylla HOM05D006498 ORTHO05D006377 1.4e-41 174.9 123 66.7
AUR62025173 Chenopodium quinoa HOM05D006498 ORTHO05D006377 1.5e-40 171.4 269 44.2
Potri.006G075000 Populus trichocarpa HOM05D006498 ORTHO05D006377 2.6e-40 170.6 334 39.2
Thhalv10022749m.g Eutrema salsugineum HOM05D006498 ORTHO05D006377 3.4e-40 170.2 379 38.0
MELO3C017425.2 Cucumis melo HOM05D006498 ORTHO05D006377 5.7e-40 169.5 429 36.6
AL3G49020 Arabidopsis lyrata HOM05D006498 ORTHO05D006377 9.8e-40 168.7 445 36.0
MBI16_g05840_MAGBIO Magnolia biondii HOM05D006498 ORTHO05D006377 1.7e-39 167.9 122 68.0
DCAR_004773 Daucus carota HOM05D006498 ORTHO05D006377 8.3e-39 165.6 326 37.7
ECA247G1929 Erigeron canadensis HOM05D000109 ORTHO05D006377 1.1e-38 165.2 404 34.9
Sp3g32630 Schrenkiella parvula HOM05D006498 ORTHO05D006377 1.1e-38 165.2 337 40.4
ClCG06G013640 Citrullus lanatus HOM05D006498 ORTHO05D006377 1.4e-38 164.9 501 34.9
CDE05G1404 Ceratophyllum demersum HOM05D006498 ORTHO05D006377 3.1e-38 163.7 358 37.4
Glyma.17G058700 Glycine max HOM05D006498 ORTHO05D006377 4.1e-38 163.3 372 35.8
Sed0023189 Sechium edule HOM05D006498 ORTHO05D006377 9.1e-38 162.2 421 37.8
Carub.0003s3350 Capsella rubella HOM05D006498 ORTHO05D006377 1.2e-37 161.8 333 40.2
Sabra06G0055700 Salix brachista HOM05D006498 ORTHO05D006377 1.2e-37 161.8 410 36.6
Lj2A1114T36 Lonicera japonica HOM05D006498 ORTHO05D006377 2.0e-37 161.0 443 32.7
EL10Ac8g19141 Beta vulgaris HOM05D006498 ORTHO05D006377 2.7e-37 160.6 245 42.9
PSO063G6554 Papaver somniferum HOM05D006498 ORTHO05D006377 3.5e-37 160.2 327 40.1
CsaV3_1G031910 Cucumis sativus L. HOM05D006498 ORTHO05D006377 2.3e-36 157.5 419 36.3
ATR0626G368 Amborella trichopoda HOM05D006498 ORTHO05D006377 6.6e-36 156.0 396 36.6
Lalb_Chr12g0199631 Lupinus albus HOM05D006498 ORTHO05D006377 1.1e-35 155.2 107 67.3
BolC7t40702H Brassica oleracea HOM05D006498 ORTHO05D006377 1.9e-35 154.5 438 34.7
PSO170G2385 Papaver somniferum HOM05D006498 ORTHO05D006377 1.9e-35 154.5 387 36.4
HPP92_011644 Vanilla planifolia HOM05D006498 ORTHO05D006377 3.3e-35 153.7 355 35.2
Os02g0175900 Oryza sativa ssp. japonica HOM05D006498 ORTHO05D006377 9.5e-35 152.1 115 67.8
Zm00001eb206900 Zea mays HOM05D006498 ORTHO05D006377 9.5e-35 152.1 384 37.0
Rhsim13G0054400 Rhododendron simsii HOM05D006498 ORTHO05D006377 1.2e-34 151.8 367 34.9
BcaB03g16716 Brassica carinata HOM05D006498 ORTHO05D006377 2.8e-34 150.6 332 38.0
C07p03100 Brassica napus HOM05D006498 ORTHO05D006377 3.6e-34 150.2 438 34.2
BcaC06g36544 Brassica carinata HOM05D006498 ORTHO05D006377 1.0e-33 148.7 438 34.0
Lsat_1_v5_gn_3_41001 Lactuca sativa HOM05D006498 ORTHO05D006377 2.3e-33 147.5 105 70.5
vmacro02834 Vaccinium macrocarpon HOM05D006498 ORTHO05D006377 4.0e-33 146.7 452 30.5
BraA07t27953Z Brassica rapa HOM05D006498 ORTHO05D006377 3.4e-32 143.7 333 37.8
Lsat_1_v5_gn_7_52821 Lactuca sativa HOM05D006498 ORTHO05D006377 2.2e-31 141.0 105 67.6
A07p01520 Brassica napus HOM05D006498 ORTHO05D006377 3.7e-31 140.2 336 37.2
Zm00001eb233520 Zea mays HOM05D006498 ORTHO05D006377 8.3e-31 139.0 477 32.1
Lsat_1_v5_gn_4_158461 Lactuca sativa HOM05D006498 ORTHO05D006377 2.4e-30 137.5 114 62.3
Lsat_1_v5_gn_5_22180 Lactuca sativa HOM05D006498 ORTHO05D006377 1.2e-29 135.2 113 61.9
Lsat_1_v5_gn_9_15580 Lactuca sativa HOM05D006498 ORTHO05D006377 1.0e-28 132.1 102 65.7
CDE05G1079 Ceratophyllum demersum HOM05D006498 ORTHO05D006377 5.0e-28 129.8 76 84.2
AagrBONN_evm.TU.Sc2ySwM_228.1455 Anthoceros agrestis HOM05D006498 ORTHO05D006377 2.5e-27 127.5 469 31.3
Lalb_Chr13g0299941 Lupinus albus HOM05D006498 ORTHO05D006377 1.6e-26 124.8 298 34.2
SMO361G0453 Selaginella moellendorffii HOM05D006498 ORTHO05D006377 1.0e-25 122.1 357 32.5
Mapoly0001s0081 Marchantia polymorpha HOM05D006498 ORTHO05D006377 6.8e-25 119.4 169 43.8
COL.COLO4_06397 Corchorus olitorius HOM05D006498 ORTHO05D006377 4.4e-24 116.7 64 84.4
CBR_g12030 Chara braunii HOM05D006498 ORTHO05D006377 2.2e-23 114.4 94 59.6
Cpa.g.sc2680.1 Carica papaya HOM05D006498 ORTHO05D006377 2.4e-22 110.9 355 32.7
Pp3c15_6280 Physcomitrium patens HOM05D006498 ORTHO05D006377 7.8e-21 105.9 485 29.1
Actinidia30000 Actinidia chinensis HOM05D006498 ORTHO05D006377 1.6e-18 98.2 293 31.7
Lsat_1_v5_gn_4_108221 Lactuca sativa HOM05D006498 ORTHO05D006377 2.3e-17 94.4 68 72.1
QL02p046697 Quercus lobata HOM05D006498 ORTHO05D006377 4.0e-17 93.6 54 75.9
SHI03076 Sapria himalayana HOM05D006498 ORTHO05D006377 6.8e-17 92.8 54 79.6
Ah.09g231280 Amaranthus hybridus HOM05D006498 ORTHO05D006377 8.9e-17 92.4 391 29.4
QL02p046691 Quercus lobata HOM05D006498 ORTHO05D000004 8.9e-17 92.4 118 44.1
SGA_v2.0_scaffold95G28701 Striga asiatica HOM05D006498 ORTHO05D006377 2.6e-16 90.9 62 71.0
Solyc09g055870.2 Solanum lycopersicum HOM05D006498 ORTHO05D006377 5.8e-16 89.7 385 30.6
Lalb_Chr13g0299961 Lupinus albus HOM05D006498 ORTHO05D006377 7.5e-16 89.4 54 75.9
Solyc09g055850.3 Solanum lycopersicum HOM05D006498 ORTHO05D006377 1.3e-15 88.6 53 79.2
Sed0023288 Sechium edule HOM05D006498 ORTHO05D006377 4.0e-09 67.0 50 70.0
PRCOL_00004634 Prasinoderma coloniale HOM05D006498 ORTHO05D006377 1.7e-07 61.6 84 36.9
unitig_0.g418 Utricularia gibba HOM05D006498 ORTHO05D006377 1.1e-06 58.9 50 66.0
Cre06.g278258 Chlamydomonas reinhardtii HOM05D006498 ORTHO05D006377 7.1e-06 56.2 147 31.3
MCO07G543 Micromonas commoda HOM05D006498 ORTHO05D006377 7.1e-06 56.2 70 42.9


User provided reference genes

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