Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_60.g25574 Utricularia gibba HOM05D006745 ORTHO05D008449 2.2e-151 538.9 260 100.0
Migut.N00678 Erythranthe guttata HOM05D006745 ORTHO05D008449 7.6e-88 327.8 257 62.6
SGA_v2.0_scaffold77G25309 Striga asiatica HOM05D006745 ORTHO05D008449 6.0e-85 318.2 260 61.9
Oeu058205.1 Olea europaea HOM05D006745 ORTHO05D008449 5.1e-84 315.1 255 62.7
Oeu058207.1 Olea europaea HOM05D006745 ORTHO05D008449 5.1e-84 315.1 255 62.7
THA.LOC104817830 Tarenaya hassleriana HOM05D006745 ORTHO05D008449 1.4e-81 307.0 258 60.5
Sc22g0002270 Simmondsia chinensis HOM05D006745 ORTHO05D008449 2.4e-81 306.2 255 57.6
Solyc02g061950.4 Solanum lycopersicum HOM05D006745 ORTHO05D008449 6.9e-81 304.7 258 60.5
GSVIVG01007224001 Vitis vinifera HOM05D006745 ORTHO05D008449 9.0e-81 304.3 253 60.5
TPR.G25110 Trifolium pratense HOM05D006745 ORTHO05D008449 1.2e-80 303.9 252 59.9
arahy.Tifrunner.gnm1.ann1.DU2BQF Arachis hypogaea HOM05D006745 ORTHO05D008449 2.6e-80 302.8 252 59.1
arahy.Tifrunner.gnm1.ann1.EE1FTG Arachis hypogaea HOM05D006745 ORTHO05D008449 2.6e-80 302.8 252 59.1
Lj2g0007566 Lotus japonicus HOM05D006745 ORTHO05D008449 2.6e-80 302.8 252 58.7
QL06p051396 Quercus lobata HOM05D006745 ORTHO05D008449 4.5e-80 302.0 253 61.3
Gohir.A11G041100 Gossypium hirsutum HOM05D006745 ORTHO05D008449 5.8e-80 301.6 253 60.1
AUR62003702 Chenopodium quinoa HOM05D006745 ORTHO05D008449 7.6e-80 301.2 253 59.3
Phvul.002G105300 Phaseolus vulgaris HOM05D006745 ORTHO05D008449 7.6e-80 301.2 252 58.7
Eucgr.I02315 Eucalyptus grandis HOM05D006745 ORTHO05D008449 1.0e-79 300.8 253 60.9
Gohir.D11G044400 Gossypium hirsutum HOM05D006745 ORTHO05D008449 1.0e-79 300.8 253 59.7
Gorai.007G047700 Gossypium raimondii HOM05D006745 ORTHO05D008449 1.0e-79 300.8 253 59.7
Lj2A482T63 Lonicera japonica HOM05D006745 ORTHO05D008449 1.0e-79 300.8 253 60.9
Carub.0002s0099 Capsella rubella HOM05D006745 ORTHO05D008449 1.7e-79 300.1 251 60.6
Cfa007050 Carpinus fangiana HOM05D006745 ORTHO05D008449 1.7e-79 300.1 253 60.5
Rhsim08G0031100 Rhododendron simsii HOM05D006745 ORTHO05D008449 1.7e-79 300.1 248 60.1
AL2G11270 Arabidopsis lyrata HOM05D006745 ORTHO05D008449 2.9e-79 299.3 251 60.6
Glyma.01G163200 Glycine max HOM05D006745 ORTHO05D008449 2.9e-79 299.3 252 59.1
PGSC0003DMG401023885 Solanum tuberosum HOM05D006745 ORTHO05D008449 2.9e-79 299.3 258 59.3
VMungo1215G1582 Vigna mungo HOM05D006745 ORTHO05D008449 2.9e-79 299.3 254 58.3
HanXRQChr16g0531741 Helianthus annuus HOM05D006745 ORTHO05D008449 3.8e-79 298.9 253 58.9
Lsat_1_v5_gn_3_71521 Lactuca sativa HOM05D006745 ORTHO05D008449 3.8e-79 298.9 252 58.3
Ca_24936_v3 Cicer arietinum L. HOM05D006745 ORTHO05D008449 6.5e-79 298.1 252 59.9
Sopen02g012910 Solanum pennellii HOM05D006745 ORTHO05D008449 8.4e-79 297.7 258 58.9
CAN.G576.2 Capsicum annuum HOM05D006745 ORTHO05D008449 1.1e-78 297.4 258 58.9
vmacro18434 Vaccinium macrocarpon HOM05D006745 ORTHO05D008449 1.1e-78 297.4 253 59.3
Aa31LG2G1020 Aethionema arabicum HOM05D006745 ORTHO05D008449 1.9e-78 296.6 254 59.1
Ciclev10026368m.g Citrus clementina HOM05D006745 ORTHO05D008449 2.5e-78 296.2 254 58.7
MELO3C007934.2 Cucumis melo HOM05D006745 ORTHO05D008449 2.5e-78 296.2 261 58.2
FAN19G0356 Fragaria x ananassa HOM05D006745 ORTHO05D008449 2.5e-78 296.2 260 58.5
Psat2g152400 Pisum sativum HOM05D006745 ORTHO05D008449 2.5e-78 296.2 252 58.7
BcaC04g22678 Brassica carinata HOM05D006745 ORTHO05D008449 3.2e-78 295.8 258 58.9
BolC9t54579H Brassica oleracea HOM05D006745 ORTHO05D008449 3.2e-78 295.8 258 58.9
BcaB07g31542 Brassica carinata HOM05D006745 ORTHO05D008449 4.2e-78 295.4 258 57.8
CsaV3_6G047410 Cucumis sativus L. HOM05D006745 ORTHO05D008449 4.2e-78 295.4 256 59.0
PGR119G0426 Punica granatum HOM05D006745 ORTHO05D008449 4.2e-78 295.4 265 57.4
MD15G1238900 Malus domestica HOM05D006745 ORTHO05D008449 5.5e-78 295.0 259 58.7
A09p13970 Brassica napus HOM05D006745 ORTHO05D008449 9.3e-78 294.3 259 58.7
Medtr5g022860 Medicago truncatula HOM05D006745 ORTHO05D008449 9.3e-78 294.3 252 58.3
Nn6g31942 Nelumbo nucifera HOM05D006745 ORTHO05D008449 1.2e-77 293.9 255 56.5
RcHm_v2.0_Chr2g0098641 Rosa chinensis HOM05D006745 ORTHO05D008449 2.1e-77 293.1 256 58.2
TWI73G1304 Tripterygium wilfordii HOM05D006745 ORTHO05D008449 2.1e-77 293.1 253 58.9
Nitab4.5_0000188g0160 Nicotiana tabacum HOM05D006745 ORTHO05D008449 2.7e-77 292.7 288 53.1
FAN23G2677 Fragaria x ananassa HOM05D006745 ORTHO05D008449 6.0e-77 291.6 260 57.7
Haze_03682 Corylus avellana HOM05D006745 ORTHO05D008449 7.9e-77 291.2 241 61.0
CSS0026839 Camellia sinensis var. sinensis HOM05D006745 ORTHO05D008449 1.0e-76 290.8 245 59.2
EL10Ac6g15168 Beta vulgaris HOM05D006745 ORTHO05D008449 1.3e-76 290.4 253 58.1
CANSAT01G0215 Cannabis sativa HOM05D006745 ORTHO05D008449 3.9e-76 288.9 253 58.1
CSS0046970 Camellia sinensis var. sinensis HOM05D006745 ORTHO05D008449 5.1e-76 288.5 245 58.8
Manes.01G150100 Manihot esculenta HOM05D006745 ORTHO05D008449 5.1e-76 288.5 259 57.1
Sed0008453 Sechium edule HOM05D006745 ORTHO05D008449 1.1e-75 287.3 254 57.1
Potri.005G109000 Populus trichocarpa HOM05D006745 ORTHO05D008449 1.9e-75 286.6 253 57.3
Actinidia28725 Actinidia chinensis HOM05D006745 ORTHO05D008449 2.5e-75 286.2 253 57.7
FAN26G1827 Fragaria x ananassa HOM05D006745 ORTHO05D008449 2.5e-75 286.2 261 57.5
Lalb_Chr09g0321491 Lupinus albus HOM05D006745 ORTHO05D008449 3.3e-75 285.8 252 58.3
Os02g0120300 Oryza sativa ssp. japonica HOM05D006745 ORTHO05D008449 2.1e-74 283.1 256 55.5
ECA246G0119 Erigeron canadensis HOM05D006745 ORTHO05D008449 3.7e-74 282.3 256 55.5
DCAR_023133 Daucus carota HOM05D006745 ORTHO05D008449 1.4e-73 280.4 257 55.6
BcaC04g22675 Brassica carinata HOM05D006745 ORTHO05D008449 2.4e-73 279.6 261 56.7
Cc07_g11200 Coffea canephora HOM05D006745 ORTHO05D008449 4.1e-73 278.9 229 61.6
PSO675G1483 Papaver somniferum HOM05D006745 ORTHO05D008449 1.5e-72 276.9 245 55.9
PSO541G1183 Papaver somniferum HOM05D006745 ORTHO05D008449 7.6e-72 274.6 258 53.5
Sabra05G0089300 Salix brachista HOM05D006745 ORTHO05D008449 8.5e-71 271.2 228 59.2
Zm00001eb229980 Zea mays HOM05D006745 ORTHO05D008449 2.5e-70 269.6 256 53.5
Prupe.7G173600 Prunus persica HOM05D006745 ORTHO05D008449 3.2e-70 269.2 256 54.7
Ah.02g123330 Amaranthus hybridus HOM05D006745 ORTHO05D008449 7.2e-70 268.1 257 54.9
Aqoxy6G02103 Aquilegia oxysepala HOM05D006745 ORTHO05D008449 2.7e-69 266.2 266 51.1
HPP92_012950 Vanilla planifolia HOM05D006745 ORTHO05D008449 2.3e-68 263.1 256 50.4
Thecc.01G012900 Theobroma cacao HOM05D006745 ORTHO05D008449 3.0e-68 262.7 253 55.3
Duzib147G0156 Durio zibethinus HOM05D006745 ORTHO05D008449 8.7e-68 261.2 253 55.3
CiPaw.07G062000 Carya illinoinensis HOM05D006745 ORTHO05D008449 7.4e-67 258.1 253 54.2
ClCG01G020530 Citrullus lanatus HOM05D006745 ORTHO05D008449 4.8e-66 255.4 272 52.9
ATR0661G256 Amborella trichopoda HOM05D006745 ORTHO05D008449 6.3e-66 255.0 256 48.8
SalBow3G1250 Salvia bowleyana HOM05D006745 ORTHO05D008449 3.1e-65 252.7 249 54.2
AUR62018011 Chenopodium quinoa HOM05D006745 ORTHO05D008449 1.3e-63 247.3 215 60.0
AT1G63855 Arabidopsis thaliana HOM05D006745 ORTHO05D008449 1.2e-61 240.7 252 52.4
Thhalv10023706m.g Eutrema salsugineum HOM05D006745 ORTHO05D008449 4.6e-61 238.8 256 50.4
Atru.chr3.895 Acer truncatum HOM05D006745 ORTHO05D008449 1.0e-60 237.7 253 51.4
Peaxi162Scf00439g00049 Petunia axillaris HOM05D006745 ORTHO05D008449 3.9e-60 235.7 268 50.7
Sp2g00830 Schrenkiella parvula HOM05D006745 ORTHO05D008449 2.0e-59 233.4 251 50.2
FvH4_1g11230 Fragaria vesca HOM05D006745 ORTHO05D008449 1.4e-57 227.3 209 55.5
FAN28G2493 Fragaria x ananassa HOM05D006745 ORTHO05D008449 2.0e-56 223.4 260 49.6
Nitab4.5_0002337g0130 Nicotiana tabacum HOM05D006745 ORTHO05D008449 1.3e-55 220.7 238 49.6
Atru.chr3.884 Acer truncatum HOM05D006745 ORTHO05D008449 7.2e-54 214.9 227 51.5
Pp3c3_3170 Physcomitrium patens HOM05D006745 ORTHO05D008449 1.0e-52 211.1 254 43.3
SMO340G0117 Selaginella moellendorffii HOM05D006745 ORTHO05D008449 3.0e-52 209.5 253 43.5
CDE05G1799 Ceratophyllum demersum HOM05D006745 ORTHO05D008449 8.8e-52 208.0 199 51.3
Mapoly0041s0084 Marchantia polymorpha HOM05D006745 ORTHO05D008449 3.3e-51 206.1 256 43.0
CARHR047310 Cardamine hirsuta HOM05D006745 ORTHO05D008449 1.4e-49 200.7 188 56.4
Aqoxy278s001 Aquilegia oxysepala HOM05D006745 ORTHO05D008449 9.1e-49 198.0 234 47.4
CARHR047280 Cardamine hirsuta HOM05D006745 ORTHO05D008449 9.1e-49 198.0 121 75.2
CSS0012608 Camellia sinensis var. sinensis HOM05D006745 ORTHO05D008449 1.5e-46 190.7 246 46.3
Sed0011409 Sechium edule HOM05D006745 ORTHO05D008449 1.2e-45 187.6 282 42.9
Pp3c3_3178 Physcomitrium patens HOM05D006745 ORTHO05D008449 1.4e-44 184.1 254 40.2
Cpa.g.sc29.52 Carica papaya HOM05D006745 ORTHO05D008449 2.6e-43 179.9 180 52.2
Glyma.02G164500 Glycine max HOM05D006745 ORTHO05D008449 6.3e-42 175.3 241 39.4
arahy.Tifrunner.gnm1.ann1.N8WRPV Arachis hypogaea HOM05D006745 ORTHO05D008449 1.2e-40 171.0 169 51.5
Medtr3g096570 Medicago truncatula HOM05D006745 ORTHO05D008449 3.4e-35 152.9 110 66.4
Medtr3g096562 Medicago truncatula HOM05D006745 ORTHO05D008449 3.7e-34 149.4 164 50.0
MSTRG.17961 Avicennia marina HOM05D006745 ORTHO05D008449 1.4e-33 147.5 168 48.8
BraA09t37044Z Brassica rapa HOM05D006745 ORTHO05D008449 8.0e-29 131.7 150 48.7
Hund14069 Selenicereus undatus HOM05D006745 ORTHO05D008449 2.9e-23 113.2 180 40.6
SEGI_40099 Sequoiadendron giganteum HOM05D006745 ORTHO05D008449 2.5e-22 110.2 84 63.1
Rhsim01G0268300 Rhododendron simsii HOM05D006745 ORTHO05D008449 4.3e-22 109.4 137 44.5
Medtr2g078490 Medicago truncatula HOM05D006745 ORTHO05D008449 7.5e-19 98.6 103 52.4
Glyma.11G080201 Glycine max HOM05D006745 ORTHO05D008449 1.5e-14 84.3 61 60.7
COL.COLO4_22483 Corchorus olitorius HOM05D006745 ORTHO05D008449 3.1e-12 76.6 45 80.0
BolC4t24505H Brassica oleracea HOM05D006745 ORTHO05D008449 1.6e-08 64.3 102 38.2
Mapoly0001s0305 Marchantia polymorpha HOM05D002956 ORTHO05D008031 1.7e-07 60.8 182 28.6
BcaNung02464 Brassica carinata HOM05D002553 ORTHO05D002767 8.6e-07 58.5 171 28.7
A06p37580 Brassica napus HOM05D002553 ORTHO05D002767 8.6e-07 58.5 171 28.7
C07p40730 Brassica napus HOM05D002553 ORTHO05D002767 8.6e-07 58.5 171 28.7
BolC7t44601H Brassica oleracea HOM05D002553 ORTHO05D002767 8.6e-07 58.5 171 28.7
BraA06t26677Z Brassica rapa HOM05D002553 ORTHO05D002767 8.6e-07 58.5 171 28.7
Pp3c27_4830 Physcomitrium patens HOM05D002553 ORTHO05D002767 1.1e-06 58.2 200 26.5
THA.LOC104818678 Tarenaya hassleriana HOM05D002553 ORTHO05D002767 1.1e-06 58.2 174 28.2
Ciclev10003913m.g Citrus clementina HOM05D002553 ORTHO05D002767 1.5e-06 57.8 173 29.5
Lalb_Chr22g0351301 Lupinus albus HOM05D006908 ORTHO05D008662 1.9e-06 57.4 207 26.1
Phvul.005G170700 Phaseolus vulgaris HOM05D006908 ORTHO05D008662 2.5e-06 57.0 207 25.6
BcaC08g47561 Brassica carinata HOM05D006908 ORTHO05D008662 4.3e-06 56.2 99 33.3
MCO11G773 Micromonas commoda HOM05D001602 ORTHO05D006966 4.3e-06 56.2 89 39.3
Oeu063957.2 Olea europaea HOM05D006908 ORTHO05D008662 4.3e-06 56.2 200 29.5
TPR.G37174 Trifolium pratense HOM05D006908 ORTHO05D008662 4.3e-06 56.2 204 25.5
Psat5g298720 Pisum sativum HOM05D006908 ORTHO05D008662 5.6e-06 55.8 117 32.5
CANSAT54G1478 Cannabis sativa HOM05D002956 ORTHO05D008031 7.3e-06 55.5 193 29.0
Medtr2g102040 Medicago truncatula HOM05D006908 ORTHO05D008662 7.3e-06 55.5 204 26.0
Thhalv10003627m.g Eutrema salsugineum HOM05D002553 ORTHO05D002767 9.5e-06 55.1 174 27.0
Sp2g20630 Schrenkiella parvula HOM05D002553 ORTHO05D002767 9.5e-06 55.1 174 27.0


User provided reference genes

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