Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_60.g25570 Utricularia gibba HOM05D005992 ORTHO05D007476 1.8e-93 345.9 169 100.0
Oeu058218.1 Olea europaea HOM05D005992 ORTHO05D007476 2.2e-35 152.9 166 53.0
SGA_v2.0_scaffold8G04484 Striga asiatica HOM05D005992 ORTHO05D007476 1.1e-34 150.6 167 52.7
SalBow6G0883 Salvia bowleyana HOM05D005992 ORTHO05D007476 1.8e-34 149.8 177 53.7
Migut.D00757 Erythranthe guttata HOM05D005992 ORTHO05D007476 3.5e-33 145.6 168 54.2
Nitab4.5_0009028g0010 Nicotiana tabacum HOM05D005992 ORTHO05D007476 1.0e-32 144.1 154 53.9
Nitab4.5_0001348g0200 Nicotiana tabacum HOM05D005992 ORTHO05D007476 1.1e-31 140.6 167 51.5
Nitab4.5_0005967g0050 Nicotiana tabacum HOM05D005992 ORTHO05D007476 1.5e-31 140.2 166 49.4
Nitab4.5_0008751g0010 Nicotiana tabacum HOM05D005992 ORTHO05D007476 3.3e-31 139.0 167 51.5
Sopen06g034190 Solanum pennellii HOM05D005992 ORTHO05D007476 4.3e-31 138.7 163 50.3
Peaxi162Scf00390g00125 Petunia axillaris HOM05D005992 ORTHO05D007476 9.5e-31 137.5 167 49.7
SalBow2G0316 Salvia bowleyana HOM05D005992 ORTHO05D007476 9.5e-31 137.5 207 45.4
PGSC0003DMG400027679 Solanum tuberosum HOM05D005992 ORTHO05D007476 9.5e-31 137.5 163 49.7
Cc01_g15730 Coffea canephora HOM05D005992 ORTHO05D007476 1.2e-30 137.1 169 47.9
MSTRG.18519 Avicennia marina HOM05D005992 ORTHO05D007476 6.8e-29 131.3 156 52.6
CAN.G874.50 Capsicum annuum HOM05D005992 ORTHO05D007476 6.8e-29 131.3 147 53.7
Solyc06g082830.3 Solanum lycopersicum HOM05D005992 ORTHO05D007476 1.2e-28 130.6 163 49.1
Cpa.g.sc8.7 Carica papaya HOM05D005992 ORTHO05D007476 2.2e-27 126.3 160 50.0
Hma1.2p1_0834F.1_g225730 Hydrangea macrophylla HOM05D005992 ORTHO05D007476 1.9e-26 123.2 157 47.1
Oeu064700.1 Olea europaea HOM05D005992 ORTHO05D007476 5.4e-26 121.7 94 63.8
HanXRQChr08g0230801 Helianthus annuus HOM05D005992 ORTHO05D007476 1.2e-25 120.6 147 51.0
CSS0023701 Camellia sinensis var. sinensis HOM05D005992 ORTHO05D007476 1.6e-25 120.2 155 49.0
CSS0036227 Camellia sinensis var. sinensis HOM05D005992 ORTHO05D007476 1.6e-25 120.2 155 49.0
Lsat_1_v5_gn_9_15721 Lactuca sativa HOM05D005992 ORTHO05D007476 2.7e-25 119.4 151 51.7
Dinv28773 Davidia involucrata HOM05D005992 ORTHO05D007476 3.3e-23 112.5 159 47.2
Prupe.8G267200 Prunus persica HOM05D005992 ORTHO05D007476 5.6e-23 111.7 170 42.9
ECA247G1400 Erigeron canadensis HOM05D005992 ORTHO05D007476 4.7e-22 108.6 149 49.7
Lj1C108T9 Lonicera japonica HOM05D005992 ORTHO05D007476 1.8e-21 106.7 108 53.7
MD03G1298800 Malus domestica HOM05D005992 ORTHO05D007476 3.1e-21 105.9 162 44.4
Potri.014G172600 Populus trichocarpa HOM05D005992 ORTHO05D007476 3.1e-21 105.9 176 40.9
Medtr3g118100 Medicago truncatula HOM05D005992 ORTHO05D007476 6.8e-21 104.8 171 42.1
Gohir.A11G146200 Gossypium hirsutum HOM05D005992 ORTHO05D007476 8.9e-21 104.4 161 43.5
Gohir.D11G152400 Gossypium hirsutum HOM05D005992 ORTHO05D007476 8.9e-21 104.4 161 43.5
Gorai.007G163000 Gossypium raimondii HOM05D005992 ORTHO05D007476 8.9e-21 104.4 161 43.5
CiPaw.13G059000 Carya illinoinensis HOM05D005992 ORTHO05D007476 1.5e-20 103.6 156 47.4
Hma1.2p1_0161F.1_g071860 Hydrangea macrophylla HOM05D005992 ORTHO05D007476 2.0e-20 103.2 151 43.0
CANSAT11G0965 Cannabis sativa HOM05D005992 ORTHO05D007476 4.4e-20 102.1 168 46.4
FAN13G0560 Fragaria x ananassa HOM05D005992 ORTHO05D007476 4.4e-20 102.1 156 42.9
FAN18G0660 Fragaria x ananassa HOM05D005992 ORTHO05D007476 5.8e-20 101.7 156 42.3
Psat5g001840 Pisum sativum HOM05D005992 ORTHO05D007476 5.8e-20 101.7 154 44.2
FAN08G0048 Fragaria x ananassa HOM05D005992 ORTHO05D007476 7.5e-20 101.3 156 42.3
FvH4_5g18680 Fragaria vesca HOM05D005992 ORTHO05D007476 9.8e-20 100.9 156 42.3
Manes.13G058400 Manihot esculenta HOM05D005992 ORTHO05D007476 9.8e-20 100.9 163 45.4
FAN04G1498 Fragaria x ananassa HOM05D005992 ORTHO05D007476 1.3e-19 100.5 156 41.7
Eucgr.K02345 Eucalyptus grandis HOM05D005992 ORTHO05D007476 1.7e-19 100.1 166 43.4
TWI36G0694 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 1.7e-19 100.1 160 42.5
RcHm_v2.0_Chr7g0176831 Rosa chinensis HOM05D005992 ORTHO05D007476 2.2e-19 99.8 158 43.7
Ca_15291_v3 Cicer arietinum L. HOM05D005992 ORTHO05D007476 3.7e-19 99.0 182 41.2
TWI75G1816 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 6.4e-19 98.2 156 43.6
Duzib138G0279 Durio zibethinus HOM05D005992 ORTHO05D007476 1.1e-18 97.4 163 41.7
Manes.12G055803 Manihot esculenta HOM05D005992 ORTHO05D007476 1.4e-18 97.1 159 44.7
Lj1g0017920 Lotus japonicus HOM05D005992 ORTHO05D007476 1.9e-18 96.7 153 43.8
arahy.Tifrunner.gnm1.ann1.DJH8FA Arachis hypogaea HOM05D005992 ORTHO05D007476 2.4e-18 96.3 172 44.2
COL.COLO4_19718 Corchorus olitorius HOM05D005992 ORTHO05D007476 3.2e-18 95.9 164 42.7
TWI36G1335 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 3.2e-18 95.9 152 42.1
VMungo1309G0397 Vigna mungo HOM05D005992 ORTHO05D007476 5.4e-18 95.1 169 42.0
Phvul.009G118300 Phaseolus vulgaris HOM05D005992 ORTHO05D007476 9.2e-18 94.4 173 42.8
Nn7g37421 Nelumbo nucifera HOM05D005992 ORTHO05D007476 1.2e-17 94.0 156 42.3
Thecc.01G203400 Theobroma cacao HOM05D005992 ORTHO05D007476 1.2e-17 94.0 164 43.3
PSO170G4201 Papaver somniferum HOM05D005992 ORTHO05D007476 1.6e-17 93.6 162 42.6
Glyma.04G002700 Glycine max HOM05D005992 ORTHO05D007476 2.1e-17 93.2 165 42.4
PSO357G0365 Papaver somniferum HOM05D005992 ORTHO05D007476 2.1e-17 93.2 162 43.2
Duzib133G0028 Durio zibethinus HOM05D005992 ORTHO05D007476 3.5e-17 92.4 159 42.1
Glyma.06G002700 Glycine max HOM05D005992 ORTHO05D007476 3.5e-17 92.4 152 45.4
PGR044G1143 Punica granatum HOM05D005992 ORTHO05D007476 3.5e-17 92.4 153 39.9
GSVIVG01004128001 Vitis vinifera HOM05D005992 ORTHO05D007476 4.6e-17 92.0 148 44.6
Sopen09g012660 Solanum pennellii HOM05D005992 ORTHO05D007476 6.0e-17 91.7 76 57.9
Sc10g0006540 Simmondsia chinensis HOM05D005992 ORTHO05D007476 7.8e-17 91.3 148 42.6
Atru.chr6.3466 Acer truncatum HOM05D005992 ORTHO05D007476 1.3e-16 90.5 169 41.4
QL09p044779 Quercus lobata HOM05D005992 ORTHO05D007476 2.3e-16 89.7 149 45.0
Lalb_Chr11g0061201 Lupinus albus HOM05D005992 ORTHO05D007476 1.1e-15 87.4 150 40.7
Ciclev10016954m.g Citrus clementina HOM05D005992 ORTHO05D007476 3.3e-15 85.9 167 39.5
arahy.Tifrunner.gnm1.ann1.B4TR6Y Arachis hypogaea HOM05D005992 ORTHO05D007476 5.6e-15 85.1 166 42.8
Aqoxy2G04184 Aquilegia oxysepala HOM05D001906 ORTHO05D002083 1.2e-14 84.0 145 36.6
Os02g0609400 Oryza sativa ssp. japonica HOM05D005992 ORTHO05D007476 1.6e-14 83.6 157 40.8
THA.LOC104822452 Tarenaya hassleriana HOM05D005992 ORTHO05D007476 1.6e-14 83.6 146 39.7
AUR62017763 Chenopodium quinoa HOM05D005992 ORTHO05D007476 4.7e-14 82.0 159 40.9
Rhsim01G0246100 Rhododendron simsii HOM05D005992 ORTHO05D007476 6.2e-14 81.6 128 45.3
TPR.G38510 Trifolium pratense HOM05D005992 ORTHO05D007476 8.1e-14 81.3 131 41.2
MBI07_g44661_MAGBIO Magnolia biondii HOM05D005992 ORTHO05D007476 1.8e-13 80.1 167 37.7
vmacro14669 Vaccinium macrocarpon HOM05D005992 ORTHO05D007476 3.1e-13 79.3 211 33.2
Ah.04g163410 Amaranthus hybridus HOM05D005992 ORTHO05D007476 4.0e-13 79.0 146 37.7
HPP92_004514 Vanilla planifolia HOM05D005992 ORTHO05D007476 5.2e-13 78.6 147 39.5
DCAR_018600 Daucus carota HOM05D005992 ORTHO05D007476 7.5e-12 74.7 185 35.1
Os02g0599500 Oryza sativa ssp. japonica HOM05D005992 ORTHO05D007476 9.9e-12 74.3 87 47.1
THA.LOC104819021 Tarenaya hassleriana HOM05D005992 ORTHO05D007476 9.9e-12 74.3 149 34.9
BraA05t22792Z Brassica rapa HOM05D005992 ORTHO05D007476 2.2e-11 73.2 153 35.3
EL10Ac9g23025 Beta vulgaris HOM05D005992 ORTHO05D007476 2.9e-11 72.8 125 42.4
Sabra14G0132200 Salix brachista HOM05D005992 ORTHO05D007476 2.9e-11 72.8 217 30.4
TWI18G0378 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 2.9e-11 72.8 135 40.7
CDE07G1966 Ceratophyllum demersum HOM05D005992 ORTHO05D007476 1.1e-10 70.9 148 40.5
AL8G21060 Arabidopsis lyrata HOM05D005992 ORTHO05D007476 1.4e-10 70.5 119 41.2
AUR62032915 Chenopodium quinoa HOM05D005992 ORTHO05D007476 2.4e-10 69.7 87 44.8
Hma1.2p1_1756F.1_g301045 Hydrangea macrophylla HOM05D005992 ORTHO05D007476 2.4e-10 69.7 91 49.5
AT5G48335 Arabidopsis thaliana HOM05D005992 ORTHO05D007476 5.4e-10 68.6 119 39.5
CARHR183920 Cardamine hirsuta HOM05D005992 ORTHO05D007476 1.6e-09 67.0 151 35.1
Sp3g06520 Schrenkiella parvula HOM05D005992 ORTHO05D007476 2.1e-09 66.6 153 34.6
Zm00001eb246760 Zea mays HOM05D005992 ORTHO05D007476 6.0e-09 65.1 136 36.0
ATR0743G072 Amborella trichopoda HOM05D005992 ORTHO05D007476 7.8e-09 64.7 137 37.2
Carub.0008s0791 Capsella rubella HOM05D005992 ORTHO05D007476 5.1e-08 62.0 121 38.0
C05p59720 Brassica napus HOM05D005992 ORTHO05D007476 6.6e-08 61.6 148 33.1
BolC5t34626H Brassica oleracea HOM05D005992 ORTHO05D007476 6.6e-08 61.6 148 33.1
Solyc09g018900.3 Solanum lycopersicum HOM05D005992 ORTHO05D007476 8.6e-08 61.2 45 62.2
AL3G18940 Arabidopsis lyrata HOM05D005992 ORTHO05D007476 1.9e-07 60.1 99 34.3
A05p40610 Brassica napus HOM05D005992 ORTHO05D007476 1.9e-07 60.1 150 32.0
CiPaw.14G047400 Carya illinoinensis HOM05D005992 ORTHO05D007476 1.9e-07 60.1 123 39.8
PGSC0003DMG400020300 Solanum tuberosum HOM05D005992 ORTHO05D007476 5.6e-07 58.5 94 44.7
CARHR082280 Cardamine hirsuta HOM05D005992 ORTHO05D007476 1.6e-06 57.0 150 34.0
Actinidia23817 Actinidia chinensis HOM05D005992 ORTHO05D007476 4.7e-06 55.5 75 42.7
Thhalv10021713m.g Eutrema salsugineum HOM05D005992 ORTHO05D007476 4.7e-06 55.5 146 35.6


User provided reference genes

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