Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_60.g25569 Utricularia gibba HOM05D005836 ORTHO05D007335 2.9e-134 481.9 243 100.0
unitig_0.g428 Utricularia gibba HOM05D000994 ORTHO05D007335 3.8e-89 332.0 227 74.0
SalBow2G1106 Salvia bowleyana HOM05D005836 ORTHO05D007335 4.1e-67 258.8 212 67.0
CSS0005992 Camellia sinensis var. sinensis HOM05D005836 ORTHO05D007335 1.4e-64 250.4 177 70.1
MSTRG.17936 Avicennia marina HOM05D005836 ORTHO05D007335 1.2e-63 247.3 213 64.8
Oeu023901.1 Olea europaea HOM05D005836 ORTHO05D007335 2.1e-63 246.5 222 59.9
Cc01_g15580 Coffea canephora HOM05D005836 ORTHO05D007335 1.0e-62 244.2 217 61.3
Actinidia34513 Actinidia chinensis HOM05D005836 ORTHO05D007335 2.3e-62 243.0 179 70.9
Nitab4.5_0002985g0050 Nicotiana tabacum HOM05D005836 ORTHO05D007335 5.1e-62 241.9 218 61.5
Lj1C109T5 Lonicera japonica HOM05D005836 ORTHO05D007335 8.8e-62 241.1 180 70.6
Solyc06g007760.4 Solanum lycopersicum HOM05D005836 ORTHO05D007335 2.5e-61 239.6 210 62.4
CAN.G869.16 Capsicum annuum HOM05D005836 ORTHO05D007335 5.7e-61 238.4 218 61.0
Sopen06g002640 Solanum pennellii HOM05D005836 ORTHO05D007335 9.7e-61 237.7 210 61.9
PGSC0003DMG400020645 Solanum tuberosum HOM05D005836 ORTHO05D007335 9.7e-61 237.7 210 61.9
Hma1.2p1_0161F.1_g071980 Hydrangea macrophylla HOM05D005836 ORTHO05D007335 2.8e-60 236.1 213 60.6
SGA_v2.0_scaffold77G25345 Striga asiatica HOM05D005836 ORTHO05D007335 4.8e-60 235.3 211 61.1
Nitab4.5_0002641g0060 Nicotiana tabacum HOM05D005836 ORTHO05D007335 1.1e-59 234.2 210 61.9
Dinv28763 Davidia involucrata HOM05D005836 ORTHO05D007335 5.3e-59 231.9 132 83.3
Potri.013G161000 Populus trichocarpa HOM05D005836 ORTHO05D007335 9.1e-59 231.1 162 71.6
Peaxi162Scf00372g00716 Petunia axillaris HOM05D005836 ORTHO05D007335 2.0e-58 229.9 212 60.4
Rhsim01G0245400 Rhododendron simsii HOM05D005836 ORTHO05D007335 2.0e-58 229.9 218 59.6
QL01p023545 Quercus lobata HOM05D005836 ORTHO05D007335 2.6e-58 229.6 161 72.7
Gohir.D03G146100 Gossypium hirsutum HOM05D005836 ORTHO05D007335 4.5e-58 228.8 163 69.9
Peaxi162Scf00293g00715 Petunia axillaris HOM05D005836 ORTHO05D007335 4.5e-58 228.8 209 57.9
Cfa011862 Carpinus fangiana HOM05D005836 ORTHO05D007335 7.7e-58 228.0 156 71.8
Eucgr.L00742 Eucalyptus grandis HOM05D005836 ORTHO05D007335 7.7e-58 228.0 181 65.2
Thecc.09G366400 Theobroma cacao HOM05D005836 ORTHO05D007335 1.0e-57 227.6 196 61.7
Gohir.A03G022600 Gossypium hirsutum HOM05D005836 ORTHO05D007335 1.3e-57 227.3 163 69.3
Sabra13G0128800 Salix brachista HOM05D005836 ORTHO05D007335 1.7e-57 226.9 158 72.2
HanXRQChr01g0013111 Helianthus annuus HOM05D005836 ORTHO05D007335 2.2e-57 226.5 161 70.8
Sed0001744 Sechium edule HOM05D005836 ORTHO05D007335 2.9e-57 226.1 151 72.8
QL01p023477 Quercus lobata HOM05D005836 ORTHO05D007335 5.0e-57 225.3 227 57.7
TAR633G1361 Trochodendron aralioides HOM05D005836 ORTHO05D007335 5.0e-57 225.3 162 71.0
Duzib168G0065 Durio zibethinus HOM05D005836 ORTHO05D007335 8.5e-57 224.6 133 78.2
Lsat_1_v5_gn_5_176900 Lactuca sativa HOM05D005836 ORTHO05D007335 8.5e-57 224.6 161 68.9
Haze_24497 Corylus avellana HOM05D005836 ORTHO05D007335 1.9e-56 223.4 130 81.5
ECA248G3143 Erigeron canadensis HOM05D005836 ORTHO05D007335 1.9e-56 223.4 162 70.4
Manes.18G122400 Manihot esculenta HOM05D005836 ORTHO05D007335 1.9e-56 223.4 166 71.1
CiPaw.13G059700 Carya illinoinensis HOM05D005836 ORTHO05D007335 2.5e-56 223.0 149 71.8
Atru.chr10.2368 Acer truncatum HOM05D005836 ORTHO05D007335 4.2e-56 222.2 194 59.8
Migut.N00709 Erythranthe guttata HOM05D005836 ORTHO05D007335 4.2e-56 222.2 207 58.5
MD11G1049300 Malus domestica HOM05D005836 ORTHO05D007335 7.2e-56 221.5 210 57.1
SEGI_40201 Sequoiadendron giganteum HOM05D005836 ORTHO05D007335 7.2e-56 221.5 134 76.9
GSVIVG01024524001 Vitis vinifera HOM05D005836 ORTHO05D007335 7.2e-56 221.5 145 74.5
Sc03g0000150 Simmondsia chinensis HOM05D005836 ORTHO05D007335 9.4e-56 221.1 132 78.0
PGR119G1588 Punica granatum HOM05D005836 ORTHO05D007335 1.2e-55 220.7 224 53.6
vmacro14659 Vaccinium macrocarpon HOM05D005836 ORTHO05D007335 1.2e-55 220.7 132 80.3
Aqoxy2G00686 Aquilegia oxysepala HOM05D005836 ORTHO05D007335 1.6e-55 220.3 155 71.0
Os03g0331600 Oryza sativa ssp. japonica HOM05D005836 ORTHO05D007335 2.1e-55 219.9 173 65.9
THA.LOC104809827 Tarenaya hassleriana HOM05D005836 ORTHO05D007335 2.1e-55 219.9 214 58.9
ClCG02G018930 Citrullus lanatus HOM05D005836 ORTHO05D007335 2.7e-55 219.5 193 62.2
VMungo0540G1704 Vigna mungo HOM05D005836 ORTHO05D007335 2.7e-55 219.5 191 58.6
COL.COLO4_11235 Corchorus olitorius HOM05D005836 ORTHO05D007335 4.7e-55 218.8 190 62.6
MELO3C019598.2 Cucumis melo HOM05D005836 ORTHO05D007335 6.1e-55 218.4 184 63.6
Medtr3g062920 Medicago truncatula HOM05D005836 ORTHO05D007335 6.1e-55 218.4 214 54.7
CDE07G0908 Ceratophyllum demersum HOM05D005836 ORTHO05D007335 7.9e-55 218.0 222 56.8
Ciclev10002134m.g Citrus clementina HOM05D005836 ORTHO05D007335 7.9e-55 218.0 223 56.5
MD03G1046500 Malus domestica HOM05D005836 ORTHO05D007335 7.9e-55 218.0 220 54.5
Lalb_Chr17g0345731 Lupinus albus HOM05D005836 ORTHO05D007335 1.0e-54 217.6 221 55.2
Phvul.006G082200 Phaseolus vulgaris HOM05D005836 ORTHO05D007335 1.0e-54 217.6 191 59.2
ATR1127G006 Amborella trichopoda HOM05D005836 ORTHO05D007335 1.4e-54 217.2 152 71.7
Ca_15089_v3 Cicer arietinum L. HOM05D005836 ORTHO05D007335 1.4e-54 217.2 131 78.6
Zm00001eb015790 Zea mays HOM05D005836 ORTHO05D007335 1.4e-54 217.2 155 67.1
Thhalv10014671m.g Eutrema salsugineum HOM05D005836 ORTHO05D007335 2.3e-54 216.5 137 74.5
Nitab4.5_0000195g0180 Nicotiana tabacum HOM05D005836 ORTHO05D007335 3.9e-54 215.7 218 56.4
TWI31G0503 Tripterygium wilfordii HOM05D005836 ORTHO05D007335 3.9e-54 215.7 129 79.1
AT5G58250 Arabidopsis thaliana HOM05D005836 ORTHO05D007335 5.1e-54 215.3 190 61.6
DCAR_018590 Daucus carota HOM05D005836 ORTHO05D007335 6.7e-54 214.9 151 71.5
PSO339G6500 Papaver somniferum HOM05D005836 ORTHO05D007335 6.7e-54 214.9 154 71.4
Glyma.11G201500 Glycine max HOM05D005836 ORTHO05D007335 8.8e-54 214.5 194 59.3
AL8G34350 Arabidopsis lyrata HOM05D005836 ORTHO05D007335 1.1e-53 214.2 190 62.1
Hund16557 Selenicereus undatus HOM05D005836 ORTHO05D007335 2.0e-53 213.4 125 81.6
Aa31LG11G40 Aethionema arabicum HOM05D005836 ORTHO05D007335 2.6e-53 213.0 207 57.0
Carub.0008s1879 Capsella rubella HOM05D005836 ORTHO05D007335 3.3e-53 212.6 189 61.9
CsaV3_6G013260 Cucumis sativus L. HOM05D005836 ORTHO05D007335 4.4e-53 212.2 184 60.9
TPR.G13816 Trifolium pratense HOM05D005836 ORTHO05D007335 4.4e-53 212.2 131 76.3
PSO384G1899 Papaver somniferum HOM05D005836 ORTHO05D007335 5.7e-53 211.8 220 55.9
CANSAT54G2930 Cannabis sativa HOM05D005836 ORTHO05D007335 9.7e-53 211.1 158 66.5
CARHR272060 Cardamine hirsuta HOM05D005836 ORTHO05D007335 9.7e-53 211.1 190 60.5
arahy.Tifrunner.gnm1.ann1.JICC5Y Arachis hypogaea HOM05D005836 ORTHO05D007335 1.7e-52 210.3 191 57.1
Glyma.18G049400 Glycine max HOM05D005836 ORTHO05D007335 2.2e-52 209.9 191 57.6
BcaB01g04482 Brassica carinata HOM05D005836 ORTHO05D007335 2.8e-52 209.5 133 72.9
FvH4_3g41200 Fragaria vesca HOM05D005836 ORTHO05D007335 2.8e-52 209.5 191 60.2
Sp6g19910 Schrenkiella parvula HOM05D005836 ORTHO05D007335 3.7e-52 209.1 204 55.9
BraA10t43628Z Brassica rapa HOM05D005836 ORTHO05D007335 4.8e-52 208.8 185 60.0
BcaC04g19899 Brassica carinata HOM05D005836 ORTHO05D007335 6.3e-52 208.4 141 70.9
A03p12350 Brassica napus HOM05D000347 ORTHO05D001997 6.3e-52 208.4 186 60.8
C09p50080 Brassica napus HOM05D000347 ORTHO05D001997 6.3e-52 208.4 141 70.9
BolC9t57862H Brassica oleracea HOM05D005836 ORTHO05D007335 6.3e-52 208.4 141 70.9
BraA03t10547Z Brassica rapa HOM05D000347 ORTHO05D001997 6.3e-52 208.4 186 60.8
FAN16G0502 Fragaria x ananassa HOM05D005836 ORTHO05D007335 6.3e-52 208.4 189 60.8
FAN21G0342 Fragaria x ananassa HOM05D005836 ORTHO05D007335 6.3e-52 208.4 189 60.8
BcaB01g04542 Brassica carinata HOM05D005836 ORTHO05D007335 1.1e-51 207.6 141 70.2
Psat5g146440 Pisum sativum HOM05D005836 ORTHO05D007335 1.1e-51 207.6 176 59.7
AUR62027208 Chenopodium quinoa HOM05D005836 ORTHO05D007335 1.4e-51 207.2 198 58.6
arahy.Tifrunner.gnm1.ann1.R5IFJT Arachis hypogaea HOM05D005836 ORTHO05D007335 1.8e-51 206.8 191 56.0
Lalb_Chr10g0103941 Lupinus albus HOM05D005836 ORTHO05D007335 1.8e-51 206.8 177 59.9
arahy.Tifrunner.gnm1.ann1.IJ2DEQ Arachis hypogaea HOM05D005836 ORTHO05D007335 2.4e-51 206.5 191 56.0
RcHm_v2.0_Chr5g0074011 Rosa chinensis HOM05D005836 ORTHO05D007335 1.2e-50 204.1 152 67.1
MBI15_g05585_MAGBIO Magnolia biondii HOM05D005836 ORTHO05D007335 1.5e-50 203.8 119 79.8
Nn5g26758 Nelumbo nucifera HOM05D005836 ORTHO05D007335 1.5e-50 203.8 196 57.7
A10p15970 Brassica napus HOM05D000347 ORTHO05D001997 2.0e-50 203.4 202 55.9
AUR62003260 Chenopodium quinoa HOM05D005836 ORTHO05D007335 2.0e-50 203.4 198 58.1
EL10As13g24050 Beta vulgaris HOM05D005836 ORTHO05D007335 2.6e-50 203.0 124 77.4
C03p14500 Brassica napus HOM05D000347 ORTHO05D001997 3.5e-50 202.6 127 75.6
BcaB01g04547 Brassica carinata HOM05D005836 ORTHO05D007335 1.3e-49 200.7 127 74.0
BolC3t13893H Brassica oleracea HOM05D000347 ORTHO05D001997 1.3e-49 200.7 127 74.0
SMO358G0359 Selaginella moellendorffii HOM05D005836 ORTHO05D007335 2.2e-49 199.9 132 68.2
Lj6g0005555 Lotus japonicus HOM05D005836 ORTHO05D007335 2.9e-49 199.5 223 50.2
Mapoly0086s0004 Marchantia polymorpha HOM05D005836 ORTHO05D007335 5.0e-49 198.7 221 49.3
Manes.02G210261 Manihot esculenta HOM05D005836 ORTHO05D007335 6.5e-49 198.4 186 58.6
SGA_v2.0_scaffold77G25340 Striga asiatica HOM05D005836 ORTHO05D007335 5.5e-48 195.3 213 54.5
Ah.02g126180 Amaranthus hybridus HOM05D002324 ORTHO05D002380 9.4e-48 194.5 228 53.9
AagrBONN_evm.TU.Sc2ySwM_117.3281 Anthoceros agrestis HOM05D005836 ORTHO05D007335 1.2e-47 194.1 130 68.5
Nitab4.5_0002399g0060 Nicotiana tabacum HOM05D005836 ORTHO05D007335 1.6e-47 193.7 208 54.3
Oeu020454.1 Olea europaea HOM05D005836 ORTHO05D007335 1.6e-47 193.7 123 75.6
Pp3c13_24050 Physcomitrium patens HOM05D005836 ORTHO05D007335 1.3e-44 184.1 224 47.3
Pp3c4_20840 Physcomitrium patens HOM05D005836 ORTHO05D007335 1.2e-42 177.6 155 58.1
Pp3c4_20850 Physcomitrium patens HOM05D005836 ORTHO05D007335 1.2e-42 177.6 155 58.1
Pp3c3_13470 Physcomitrium patens HOM05D005836 ORTHO05D007335 6.5e-41 171.8 228 43.9
CDE06G1816 Ceratophyllum demersum HOM05D005836 ORTHO05D007335 2.2e-33 146.7 114 68.4
Manes.15G179716 Manihot esculenta HOM05D005836 ORTHO05D007335 1.2e-29 134.4 75 84.0
Prupe.6G037800 Prunus persica HOM05D005836 ORTHO05D007335 1.2e-29 134.4 163 50.9
Manes.15G179664 Manihot esculenta HOM05D005836 ORTHO05D007335 2.0e-29 133.7 73 86.3
Peaxi162Scf00372g00721 Petunia axillaris HOM05D005836 ORTHO05D007335 2.7e-26 123.2 119 54.6
Cre12.g490500 Chlamydomonas reinhardtii HOM05D005836 ORTHO05D007335 1.9e-24 117.1 134 46.3
MCO04G442 Micromonas commoda HOM05D005836 ORTHO05D007335 4.7e-23 112.5 124 47.6
PRCOL_00000331 Prasinoderma coloniale HOM05D005836 ORTHO05D007335 4.4e-21 105.9 139 39.6
Manes.15G176000 Manihot esculenta HOM05D005836 ORTHO05D007335 7.0e-19 98.6 85 61.2
Actinidia23823 Actinidia chinensis HOM05D005836 ORTHO05D007335 1.3e-17 94.4 124 50.8
HanXRQChr11g0338221 Helianthus annuus HOM05D005836 ORTHO05D007335 5.6e-16 89.0 57 71.9
CAN.G297.11 Capsicum annuum HOM05D005836 ORTHO05D000001 2.8e-15 86.7 51 80.4
SGA_v2.0_scaffold120G33007 Striga asiatica HOM05D002254 ORTHO05D007410 3.6e-15 86.3 54 74.1
Cpa.g.sc2.251 Carica papaya HOM05D005836 ORTHO05D007335 3.1e-14 83.2 56 66.1
Aqoxy392s001 Aquilegia oxysepala HOM05D005836 ORTHO05D007335 9.8e-13 78.2 104 41.3
CAN.G297.12 Capsicum annuum HOM05D005836 ORTHO05D000001 5.4e-11 72.4 65 58.5
SMO173G0022 Selaginella moellendorffii HOM05D005836 ORTHO05D007335 5.4e-11 72.4 44 70.5
HPP92_024987 Vanilla planifolia HOM05D005836 ORTHO05D007335 2.5e-08 63.5 75 52.0
BcaB01g04538 Brassica carinata HOM05D005836 ORTHO05D007335 1.4e-06 57.8 33 78.8
Cpa.g.sc2.250 Carica papaya HOM05D005836 ORTHO05D007335 1.8e-06 57.4 123 41.5
Pp3c19_3370 Physcomitrium patens HOM05D005836 ORTHO05D007335 3.1e-06 56.6 98 34.7


User provided reference genes

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