Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_60.g25515 Utricularia gibba HOM05D007356 ORTHO05D009247 2.0e-245 852.0 439 100.0
Migut.H00199 Erythranthe guttata HOM05D007356 ORTHO05D009247 1.7e-111 407.1 425 53.2
SGA_v2.0_scaffold33G13428 Striga asiatica HOM05D007356 ORTHO05D009247 6.1e-98 362.1 446 48.4
Oeu030757.2 Olea europaea HOM05D007356 ORTHO05D009247 3.5e-85 319.7 433 45.3
Hma1.2p1_0136F.1_g062070 Hydrangea macrophylla HOM05D007356 ORTHO05D009247 5.4e-70 269.2 442 39.1
Lsat_1_v5_gn_4_153101 Lactuca sativa HOM05D007356 ORTHO05D009247 5.6e-67 259.2 465 38.7
Nitab4.5_0008781g0020 Nicotiana tabacum HOM05D007356 ORTHO05D009247 2.4e-65 253.8 481 37.2
Sopen02g030430 Solanum pennellii HOM05D007356 ORTHO05D009247 3.1e-65 253.4 429 39.9
PGSC0003DMG400012678 Solanum tuberosum HOM05D007356 ORTHO05D009247 3.1e-65 253.4 428 39.7
Potri.017G112500 Populus trichocarpa HOM05D007356 ORTHO05D009247 5.3e-65 252.7 447 38.7
Haze_14128 Corylus avellana HOM05D007356 ORTHO05D009247 1.2e-64 251.5 469 37.3
Solyc02g085740.4 Solanum lycopersicum HOM05D007356 ORTHO05D009247 1.2e-64 251.5 465 38.1
CANSAT64G1351 Cannabis sativa HOM05D007356 ORTHO05D009247 9.9e-64 248.4 463 37.6
Peaxi162Scf01327g00135 Petunia axillaris HOM05D007356 ORTHO05D009247 9.9e-64 248.4 471 36.5
Cfa007946 Carpinus fangiana HOM05D007356 ORTHO05D009247 9.3e-62 241.9 489 36.0
Prupe.3G239800 Prunus persica HOM05D007356 ORTHO05D009247 9.3e-62 241.9 465 36.8
Rhsim10G0063400 Rhododendron simsii HOM05D007356 ORTHO05D009247 1.2e-61 241.5 469 35.8
HanXRQChr14g0438671 Helianthus annuus HOM05D007356 ORTHO05D009247 4.6e-61 239.6 451 37.7
Cc07_g09030 Coffea canephora HOM05D007356 ORTHO05D009247 7.9e-61 238.8 485 36.5
vmacro05573 Vaccinium macrocarpon HOM05D007356 ORTHO05D009247 7.9e-61 238.8 506 37.0
FAN14G2396 Fragaria x ananassa HOM05D007356 ORTHO05D009247 1.7e-60 237.7 451 37.0
ClCG05G012060 Citrullus lanatus HOM05D007356 ORTHO05D009247 3.9e-60 236.5 473 36.6
FvH4_6g45360 Fragaria vesca HOM05D007356 ORTHO05D009247 1.5e-59 234.6 448 37.9
THA.LOC104820954 Tarenaya hassleriana HOM05D007356 ORTHO05D009247 1.9e-59 234.2 448 36.8
Dinv34849 Davidia involucrata HOM05D007356 ORTHO05D009247 2.8e-58 230.3 431 37.4
arahy.Tifrunner.gnm1.ann1.33CL05 Arachis hypogaea HOM05D007356 ORTHO05D009247 3.6e-58 229.9 455 34.3
CsaV3_3G020350 Cucumis sativus L. HOM05D007356 ORTHO05D009247 6.2e-58 229.2 473 35.1
arahy.Tifrunner.gnm1.ann1.3VIJ8X Arachis hypogaea HOM05D007356 ORTHO05D009247 8.1e-58 228.8 454 34.4
Atru.chr8.830 Acer truncatum HOM05D007356 ORTHO05D009247 2.4e-57 227.3 445 35.3
Manes.01G108100 Manihot esculenta HOM05D007356 ORTHO05D009247 6.9e-57 225.7 449 36.3
Thecc.04G137600 Theobroma cacao HOM05D007356 ORTHO05D009247 2.0e-56 224.2 448 35.5
Gohir.A11G162300 Gossypium hirsutum HOM05D007356 ORTHO05D009247 2.6e-56 223.8 435 37.2
Sabra17G0093200 Salix brachista HOM05D007356 ORTHO05D009247 5.8e-56 222.6 464 36.0
Nitab4.5_0004118g0090 Nicotiana tabacum HOM05D007356 ORTHO05D009247 7.6e-56 222.2 437 36.4
Aa31LG5G12990 Aethionema arabicum HOM05D007356 ORTHO05D009247 1.7e-55 221.1 439 36.0
Ciclev10011716m.g Citrus clementina HOM05D007356 ORTHO05D009247 2.2e-55 220.7 441 35.1
Gorai.007G180100 Gossypium raimondii HOM05D007356 ORTHO05D009247 2.2e-55 220.7 434 37.8
MD17G1074100 Malus domestica HOM05D007356 ORTHO05D009247 4.9e-55 219.5 482 35.3
Gohir.D11G168600 Gossypium hirsutum HOM05D007356 ORTHO05D009247 8.4e-55 218.8 434 37.8
VMungo0464G1268 Vigna mungo HOM05D007356 ORTHO05D009247 2.4e-54 217.2 466 33.7
Aqoxy3G03920 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 4.2e-54 216.5 478 31.6
QL02p052579 Quercus lobata HOM05D007356 ORTHO05D009247 5.4e-54 216.1 558 30.3
Cpa.g.sc179.26 Carica papaya HOM05D007356 ORTHO05D009247 7.1e-54 215.7 466 35.4
Hund13734 Selenicereus undatus HOM05D007356 ORTHO05D009247 1.2e-53 214.9 489 35.0
PSO063G7355 Papaver somniferum HOM05D007356 ORTHO05D009247 2.7e-53 213.8 482 31.5
MD09G1084700 Malus domestica HOM05D007356 ORTHO05D009247 4.6e-53 213.0 465 35.1
Ah.16g101940 Amaranthus hybridus HOM05D007356 ORTHO05D009247 1.9e-51 207.6 485 33.2
ECA232G5000 Erigeron canadensis HOM05D007356 ORTHO05D009247 1.9e-51 207.6 313 40.6
TAR374G1737 Trochodendron aralioides HOM05D007356 ORTHO05D009247 4.3e-51 206.5 481 31.8
Lj2g0005002 Lotus japonicus HOM05D007356 ORTHO05D009247 5.6e-51 206.1 453 32.0
Actinidia18124 Actinidia chinensis HOM05D007356 ORTHO05D009247 6.2e-50 202.6 392 37.5
COL.COLO4_16192 Corchorus olitorius HOM05D007356 ORTHO05D009247 6.2e-50 202.6 448 35.3
Glyma.13G047100 Glycine max HOM05D007356 ORTHO05D009247 8.1e-50 202.2 428 32.9
Duzib133G0592 Durio zibethinus HOM05D007356 ORTHO05D009247 2.4e-49 200.7 450 35.1
AL3G11850 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 4.0e-49 199.9 448 33.7
Phvul.004G062800 Phaseolus vulgaris HOM05D007356 ORTHO05D009247 5.3e-49 199.5 426 32.6
TPR.G32461 Trifolium pratense HOM05D007356 ORTHO05D009247 5.3e-49 199.5 469 32.0
DCAR_017218 Daucus carota HOM05D007356 ORTHO05D009247 6.9e-49 199.1 424 34.7
Lalb_Chr06g0174681 Lupinus albus HOM05D007356 ORTHO05D009247 3.4e-48 196.8 424 32.5
TWI79G1397 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 1.4e-46 191.4 404 32.9
CARHR076490 Cardamine hirsuta HOM05D007356 ORTHO05D009247 1.2e-45 188.3 435 35.9
TWI31G0521 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 1.2e-45 188.3 428 32.0
MBI16_g25107_MAGBIO Magnolia biondii HOM05D007356 ORTHO05D009247 2.7e-45 187.2 466 31.5
Potri.004G102400 Populus trichocarpa HOM05D007356 ORTHO05D009247 4.6e-45 186.4 372 36.6
CSS0016710 Camellia sinensis var. sinensis HOM05D007356 ORTHO05D009247 1.0e-44 185.3 372 36.0
AUR62014539 Chenopodium quinoa HOM05D007356 ORTHO05D009247 9.6e-43 178.7 464 31.5
Eucgr.J01469 Eucalyptus grandis HOM05D007356 ORTHO05D009247 8.2e-42 175.6 341 34.9
Nn4g23745 Nelumbo nucifera HOM05D007356 ORTHO05D009247 8.2e-42 175.6 481 31.2
CDE08G0776 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 5.3e-41 172.9 481 31.2
Medtr6g017235 Medicago truncatula HOM05D007356 ORTHO05D009247 6.5e-39 166.0 409 31.1
PSO782G4491 Papaver somniferum HOM05D007356 ORTHO05D009247 5.5e-38 162.9 412 31.1
Psat1g012920 Pisum sativum HOM05D007356 ORTHO05D009247 1.2e-37 161.8 322 35.7
Sed0002469 Sechium edule HOM05D007356 ORTHO05D009247 1.2e-37 161.8 229 42.8
EL10Ac2g04607 Beta vulgaris HOM05D007356 ORTHO05D009247 1.6e-37 161.4 596 26.0
AUR62008964 Chenopodium quinoa HOM05D007356 ORTHO05D009247 8.7e-36 155.6 362 30.7
CDE02G0316 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 1.9e-35 154.5 425 29.9
RcHm_v2.0_Chr2g0163141 Rosa chinensis HOM05D007356 ORTHO05D009247 8.2e-34 149.1 302 35.1
FAN09G4466 Fragaria x ananassa HOM05D007356 ORTHO05D009247 4.1e-33 146.7 305 34.8
Os01g0694200 Oryza sativa ssp. japonica HOM05D007356 ORTHO05D009247 5.3e-33 146.4 468 31.4
PGR042G1693 Punica granatum HOM05D007356 ORTHO05D009247 2.6e-32 144.1 395 30.1
Lj2A447T55 Lonicera japonica HOM05D007356 ORTHO05D009247 1.6e-29 134.8 175 45.1
MELO3C023764.2 Cucumis melo HOM05D007356 ORTHO05D009247 1.5e-27 128.3 203 40.4
Ca_26179_v3 Cicer arietinum L. HOM05D007356 ORTHO05D009247 2.5e-27 127.5 275 32.7
GSVIVG01036444001 Vitis vinifera HOM05D007356 ORTHO05D009247 1.3e-26 125.2 172 41.9
ATR0681G386 Amborella trichopoda HOM05D007356 ORTHO05D009247 1.8e-25 121.3 544 25.2
Zm00001eb155990 Zea mays HOM05D007356 ORTHO05D009247 2.4e-25 120.9 462 29.9
Sc11g0008200 Simmondsia chinensis HOM05D007356 ORTHO05D009247 9.1e-25 119.0 260 35.0
CiPaw.03G059600 Carya illinoinensis HOM05D007356 ORTHO05D009247 4.5e-24 116.7 234 34.6
Sed0015927 Sechium edule HOM05D007356 ORTHO05D009247 4.2e-22 110.2 175 39.4
Aqoxy3G02147 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 1.2e-21 108.6 132 40.9
AL3G11840 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 9.7e-19 99.0 183 36.6
Lsat_1_v5_gn_3_87441 Lactuca sativa HOM05D007356 ORTHO05D009247 1.1e-14 85.5 118 38.1
Sc11g0008210 Simmondsia chinensis HOM05D007356 ORTHO05D009247 1.6e-13 81.6 129 37.2
Glyma.19G045202 Glycine max HOM05D007356 ORTHO05D009247 1.1e-11 75.5 175 31.4
SEGI_12886 Sequoiadendron giganteum HOM05D007356 ORTHO05D009247 3.7e-10 70.5 165 30.3
Actinidia15867 Actinidia chinensis HOM05D007356 ORTHO05D009247 1.5e-06 58.5 62 41.9
SMO145G0090 Selaginella moellendorffii HOM05D007356 ORTHO05D009247 3.2e-06 57.4 105 34.3


User provided reference genes

Program Settings