Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_60.g25508 Utricularia gibba HOM05D003347 ORTHO05D003821 1.8e-144 516.2 312 100.0
QL10p039663 Quercus lobata HOM05D003347 ORTHO05D003821 8.7e-22 108.6 89 76.4
Hund07201 Selenicereus undatus HOM05D003347 ORTHO05D003821 4.3e-21 106.3 158 61.4
Haze_25385 Corylus avellana HOM05D003347 ORTHO05D003821 1.3e-20 104.8 150 58.7
Nitab4.5_0000496g0140 Nicotiana tabacum HOM05D003347 ORTHO05D003821 5.3e-19 99.4 150 70.0
TWI31G0129 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 1.2e-18 98.2 147 49.7
Sc09g0002030 Simmondsia chinensis HOM05D003347 ORTHO05D003821 3.8e-17 93.2 125 69.6
SGA_v2.0_scaffold189G40392 Striga asiatica HOM05D000087 ORTHO05D000793 6.5e-17 92.4 122 68.0
Nitab4.5_0013117g0020 Nicotiana tabacum HOM05D003347 ORTHO05D003821 8.4e-17 92.0 133 74.4
TPR.G28695 Trifolium pratense HOM05D003347 ORTHO05D003821 1.9e-16 90.9 99 57.6
AUR62006920 Chenopodium quinoa HOM05D003347 ORTHO05D003821 3.2e-16 90.1 132 67.4
Sed0017913 Sechium edule HOM05D003347 ORTHO05D003821 5.5e-16 89.4 83 65.1
PSO063G2612 Papaver somniferum HOM05D003347 ORTHO05D003821 7.1e-16 89.0 198 53.5
HanXRQChr01g0017031 Helianthus annuus HOM05D003347 ORTHO05D003821 9.3e-16 88.6 82 68.3
CSS0039803 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 1.2e-15 88.2 81 67.9
CSS0043936 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 1.2e-15 88.2 81 67.9
MSTRG.23472 Avicennia marina HOM05D003347 ORTHO05D003821 1.6e-15 87.8 138 62.3
CDE08G0312 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 1.6e-15 87.8 83 65.1
Cfa002207 Carpinus fangiana HOM05D003347 ORTHO05D003821 2.1e-15 87.4 150 46.0
Oeu037839.1 Olea europaea HOM05D003347 ORTHO05D003821 2.1e-15 87.4 131 66.4
Glyma.06G158900 Glycine max HOM05D003347 ORTHO05D003821 3.5e-15 86.7 152 58.6
MD15G1423300 Malus domestica HOM05D003347 ORTHO05D003821 3.9e-14 83.2 91 57.1
Gorai.006G007100 Gossypium raimondii HOM05D003347 ORTHO05D003821 5.1e-14 82.8 89 66.3
TWI79G0161 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 6.7e-14 82.4 95 58.9
Lj4A831G75 Lonicera japonica HOM05D003347 ORTHO05D003821 1.1e-13 81.6 101 70.3
Cc02_g22510 Coffea canephora HOM05D003347 ORTHO05D003821 1.5e-13 81.3 90 64.4
Dinv34344 Davidia involucrata HOM05D003347 ORTHO05D003821 1.9e-13 80.9 60 76.7
Gohir.A09G006400 Gossypium hirsutum HOM05D003347 ORTHO05D003821 5.7e-13 79.3 139 61.2
PGSC0003DMG400023323 Solanum tuberosum HOM05D003347 ORTHO05D003821 5.7e-13 79.3 86 68.6
COL.COLO4_12116 Corchorus olitorius HOM05D012218 ORTHO05D003821 9.7e-13 78.6 94 55.3
MD15G1137800 Malus domestica HOM05D003347 ORTHO05D003821 9.7e-13 78.6 60 73.3
Migut.H00863 Erythranthe guttata HOM05D003347 ORTHO05D003821 1.3e-12 78.2 151 59.6
FAN28G2623 Fragaria x ananassa HOM05D003347 ORTHO05D003821 1.3e-12 78.2 127 65.4
Dinv24283 Davidia involucrata HOM05D003347 ORTHO05D003821 1.6e-12 77.8 83 63.9
Solyc05g056460.4 Solanum lycopersicum HOM05D003347 ORTHO05D003821 1.6e-12 77.8 84 69.0
TAR376G0009 Trochodendron aralioides HOM05D003347 ORTHO05D003821 2.8e-12 77.0 87 64.4
Gohir.D09G005500 Gossypium hirsutum HOM05D003347 ORTHO05D003821 6.3e-12 75.9 89 62.9
Eucgr.H05071 Eucalyptus grandis HOM05D003347 ORTHO05D003821 8.2e-12 75.5 164 59.1
Phvul.009G151400 Phaseolus vulgaris HOM05D003347 ORTHO05D003821 1.4e-11 74.7 71 64.8
PGR102G0439 Punica granatum HOM05D003347 ORTHO05D003821 1.4e-11 74.7 112 57.1
TAR381G0729 Trochodendron aralioides HOM05D003347 ORTHO05D003821 1.4e-11 74.7 71 73.2
TWI14G1287 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 2.4e-11 73.9 82 53.7
Atru.chr4.1125 Acer truncatum HOM05D003347 ORTHO05D003821 3.1e-11 73.6 68 60.3
Thecc.01G142300 Theobroma cacao HOM05D003347 ORTHO05D003821 3.1e-11 73.6 158 54.4
CiPaw.03G114900 Carya illinoinensis HOM05D003347 ORTHO05D003821 6.9e-11 72.4 60 73.3
Lj1g0014274 Lotus japonicus HOM05D003347 ORTHO05D003821 6.9e-11 72.4 76 60.5
Lalb_Chr11g0068781 Lupinus albus HOM05D003347 ORTHO05D003821 6.9e-11 72.4 71 63.4
AUR62042720 Chenopodium quinoa HOM05D003347 ORTHO05D003821 1.5e-10 71.2 110 43.6
Lj9C306T9 Lonicera japonica HOM05D003347 ORTHO05D003821 1.5e-10 71.2 69 60.9
Aqoxy6G00189 Aquilegia oxysepala HOM05D003347 ORTHO05D003821 3.4e-10 70.1 129 49.6
Psat5g058080 Pisum sativum HOM05D003347 ORTHO05D003821 3.4e-10 70.1 132 43.2
CANSAT11G2200 Cannabis sativa HOM05D003347 ORTHO05D003821 5.9e-10 69.3 56 71.4
Lsat_1_v5_gn_1_80721 Lactuca sativa HOM05D002427 ORTHO05D002818 5.9e-10 69.3 139 45.3
VMungo0540G0141 Vigna mungo HOM05D003347 ORTHO05D003821 5.9e-10 69.3 77 63.6
Dinv05136 Davidia involucrata HOM05D000040 ORTHO05D000267 7.6e-10 68.9 134 65.7
Oeu008894.1 Olea europaea HOM05D003347 ORTHO05D003821 7.6e-10 68.9 101 46.5
Lsat_1_v5_gn_9_118960 Lactuca sativa HOM05D003347 ORTHO05D003821 1.0e-09 68.6 84 54.8
Sc03g0004210 Simmondsia chinensis HOM05D003347 ORTHO05D003821 1.3e-09 68.2 80 55.0
Hma1.2p1_0217F.1_g092040 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 1.7e-09 67.8 82 61.0
Oeu008895.1 Olea europaea HOM05D003347 ORTHO05D003821 1.7e-09 67.8 89 49.4
Cpa.g.sc37.62 Carica papaya HOM05D003347 ORTHO05D003821 2.2e-09 67.4 72 55.6
TAR628G0882 Trochodendron aralioides HOM05D003347 ORTHO05D003821 2.2e-09 67.4 137 41.6
Psat5g058160 Pisum sativum HOM05D003347 ORTHO05D003821 3.8e-09 66.6 93 47.3
Rhsim10G0131200 Rhododendron simsii HOM05D003347 ORTHO05D003821 3.8e-09 66.6 121 59.5
Atru.chr6.636 Acer truncatum HOM05D003347 ORTHO05D003821 5.0e-09 66.2 70 54.3
HanXRQChr03g0071751 Helianthus annuus HOM05D003347 ORTHO05D003821 5.0e-09 66.2 129 39.5
Medtr2g007150 Medicago truncatula HOM05D003347 ORTHO05D003821 1.1e-08 65.1 70 67.1
RcHm_v2.0_Chr2g0123211 Rosa chinensis HOM05D003347 ORTHO05D003821 1.1e-08 65.1 124 55.6
HPP92_009365 Vanilla planifolia HOM05D003347 ORTHO05D003821 1.4e-08 64.7 67 58.2
Phvul.006G214600 Phaseolus vulgaris HOM05D003347 ORTHO05D003821 1.9e-08 64.3 106 51.9
VMungo1309G3119 Vigna mungo HOM05D003347 ORTHO05D003821 2.5e-08 63.9 75 56.0
Aa31LG11G7390 Aethionema arabicum HOM05D012923 ORTHO05D014747 3.2e-08 63.5 57 64.9
PGR042G0677 Punica granatum HOM05D003347 ORTHO05D003821 3.2e-08 63.5 71 64.8
vmacro01761 Vaccinium macrocarpon HOM05D003347 ORTHO05D003821 3.2e-08 63.5 128 38.3
EL10Ac4g09689 Beta vulgaris HOM05D003347 ORTHO05D003821 7.2e-08 62.4 150 45.3
ECA236G0662 Erigeron canadensis HOM05D003347 ORTHO05D003821 7.2e-08 62.4 76 63.2
Potri.019G001900 Populus trichocarpa HOM05D003347 ORTHO05D003821 7.2e-08 62.4 135 51.9
CDE06G2684 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 9.3e-08 62.0 89 44.9
AUR62014268 Chenopodium quinoa HOM05D003347 ORTHO05D003821 9.3e-08 62.0 97 43.3
ECA248G0339 Erigeron canadensis HOM05D003347 ORTHO05D003821 9.3e-08 62.0 60 61.7
SGA_v2.0_scaffold1G00306 Striga asiatica HOM05D003347 ORTHO05D003821 9.3e-08 62.0 130 46.2
Oeu033124.1 Olea europaea HOM05D002729 ORTHO05D003163 1.2e-07 61.6 79 50.6
Gohir.D04G172100 Gossypium hirsutum HOM05D003347 ORTHO05D003821 1.6e-07 61.2 70 62.9
Zm00001eb197610 Zea mays HOM05D003347 ORTHO05D003821 1.6e-07 61.2 125 40.8
Actinidia26147 Actinidia chinensis HOM05D003347 ORTHO05D003821 2.1e-07 60.8 108 50.9
Duzib132G0710 Durio zibethinus HOM05D003347 ORTHO05D003821 2.7e-07 60.5 72 62.5
Lj6g0014149 Lotus japonicus HOM05D003347 ORTHO05D003821 2.7e-07 60.5 156 41.0
Nn5g28237 Nelumbo nucifera HOM05D003347 ORTHO05D003821 2.7e-07 60.5 132 41.7
AUR62000566 Chenopodium quinoa HOM05D003347 ORTHO05D003821 3.6e-07 60.1 77 75.3
TWI59G0889 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 3.6e-07 60.1 74 50.0
MBI03_g33029_MAGBIO Magnolia biondii HOM05D003347 ORTHO05D003821 4.6e-07 59.7 56 62.5
TPR.G2109 Trifolium pratense HOM05D003347 ORTHO05D003821 4.6e-07 59.7 71 66.2
CDE06G2842 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 6.1e-07 59.3 78 47.4
Gorai.012G161200 Gossypium raimondii HOM05D003347 ORTHO05D003821 6.1e-07 59.3 80 48.8
Zm00001eb113690 Zea mays HOM05D003347 ORTHO05D003821 6.1e-07 59.3 111 41.4
ATR0684G168 Amborella trichopoda HOM05D003347 ORTHO05D003821 7.9e-07 58.9 45 71.1
SMO163G0068 Selaginella moellendorffii HOM05D003347 ORTHO05D003821 7.9e-07 58.9 137 53.3
QL11p018508 Quercus lobata HOM05D003347 ORTHO05D003821 1.0e-06 58.5 87 55.2
arahy.Tifrunner.gnm1.ann1.X7GISI Arachis hypogaea HOM05D003347 ORTHO05D003821 1.3e-06 58.2 85 49.4
DCAR_031791 Daucus carota HOM05D003347 ORTHO05D003821 1.3e-06 58.2 70 64.3
Peaxi162Scf00152g01328 Petunia axillaris HOM05D003347 ORTHO05D003821 1.3e-06 58.2 72 51.4
Haze_01671 Corylus avellana HOM05D003347 ORTHO05D003821 1.8e-06 57.8 128 40.6
CsaV3_6G037360 Cucumis sativus L. HOM05D003347 ORTHO05D003821 1.8e-06 57.8 69 47.8
Hma1.2p1_1197F.1_g266100 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 1.8e-06 57.8 73 50.7
Peaxi162Scf00011g00421 Petunia axillaris HOM05D003347 ORTHO05D003821 1.8e-06 57.8 81 46.9
GSVIVG01022926001 Vitis vinifera HOM05D003347 ORTHO05D003821 1.8e-06 57.8 44 70.5
CSS0030084 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 3.0e-06 57.0 68 54.4
CiPaw.05G044400 Carya illinoinensis HOM05D003347 ORTHO05D003821 3.0e-06 57.0 108 49.1
MELO3C014381.2 Cucumis melo HOM05D003347 ORTHO05D003821 3.0e-06 57.0 71 46.5
MELO3C023199.2 Cucumis melo HOM05D003347 ORTHO05D003821 3.0e-06 57.0 55 63.6
Gohir.A04G127400 Gossypium hirsutum HOM05D003347 ORTHO05D003821 3.0e-06 57.0 70 61.4
MD08G1229400 Malus domestica HOM05D003347 ORTHO05D003821 3.0e-06 57.0 49 63.3
Prupe.4G280500 Prunus persica HOM05D003347 ORTHO05D003821 3.0e-06 57.0 95 67.4
SHI11423 Sapria himalayana HOM05D003347 ORTHO05D003821 5.1e-06 56.2 69 62.3
Dinv19368 Davidia involucrata HOM05D003347 ORTHO05D003821 6.7e-06 55.8 46 67.4
Hund12985 Selenicereus undatus HOM05D003347 ORTHO05D003821 6.7e-06 55.8 68 48.5
THA.LOC104823661 Tarenaya hassleriana HOM05D003347 ORTHO05D003821 6.7e-06 55.8 78 56.4
Gohir.D12G040600 Gossypium hirsutum HOM05D003347 ORTHO05D003821 8.7e-06 55.5 82 54.9
Potri.001G306100 Populus trichocarpa HOM05D003347 ORTHO05D003821 8.7e-06 55.5 41 75.6
Sed0005094 Sechium edule HOM05D003347 ORTHO05D003821 8.7e-06 55.5 67 56.7
Sopen05g034850 Solanum pennellii HOM05D003347 ORTHO05D003821 8.7e-06 55.5 73 61.6


User provided reference genes

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