Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_60.g25463 Utricularia gibba HOM05D005311 ORTHO05D006160 4.2e-116 421.4 217 100.0
MSTRG.16668 Avicennia marina HOM05D005311 ORTHO05D006160 2.8e-43 179.5 226 50.9
unitig_61.g26039 Utricularia gibba HOM05D005311 ORTHO05D006160 8.1e-43 177.9 225 52.4
Migut.B00474 Erythranthe guttata HOM05D005311 ORTHO05D006160 6.9e-42 174.9 225 49.8
SGA_v2.0_scaffold32G12981 Striga asiatica HOM05D005311 ORTHO05D006160 5.8e-41 171.8 225 48.9
SalBow6G1857 Salvia bowleyana HOM05D005311 ORTHO05D006160 7.6e-41 171.4 225 49.8
COL.COLO4_32478 Corchorus olitorius HOM05D005311 ORTHO05D006160 1.9e-36 156.8 186 51.1
CiPaw.05G021200 Carya illinoinensis HOM05D005311 ORTHO05D006160 1.3e-35 154.1 151 60.3
Rhsim11G0150000 Rhododendron simsii HOM05D005311 ORTHO05D006160 2.1e-35 153.3 201 50.2
Cc02_g20120 Coffea canephora HOM05D005311 ORTHO05D006160 3.7e-35 152.5 207 48.3
Nitab4.5_0009103g0020 Nicotiana tabacum HOM05D005311 ORTHO05D006160 3.7e-35 152.5 174 50.6
GSVIVG01037044001 Vitis vinifera HOM05D005311 ORTHO05D006160 3.7e-35 152.5 221 47.5
MD10G1111900 Malus domestica HOM05D005311 ORTHO05D006160 6.2e-35 151.8 174 51.7
Sc18g0007330 Simmondsia chinensis HOM05D005311 ORTHO05D006160 8.1e-35 151.4 222 45.9
Actinidia00352 Actinidia chinensis HOM05D005311 ORTHO05D006160 1.8e-34 150.2 149 57.0
CANSAT25G3378 Cannabis sativa HOM05D005311 ORTHO05D006160 1.8e-34 150.2 172 51.7
QL11p029204 Quercus lobata HOM05D005311 ORTHO05D006160 2.4e-34 149.8 219 49.3
PGSC0003DMG400025735 Solanum tuberosum HOM05D005311 ORTHO05D006160 3.1e-34 149.4 148 56.1
CAN.G606.76 Capsicum annuum HOM05D005311 ORTHO05D006160 5.3e-34 148.7 148 56.1
Sopen01g049100 Solanum pennellii HOM05D005311 ORTHO05D006160 5.3e-34 148.7 148 55.4
Solyc01g106790.3 Solanum lycopersicum HOM05D005311 ORTHO05D006160 6.9e-34 148.3 148 54.7
TWI14G0308 Tripterygium wilfordii HOM05D005311 ORTHO05D006160 6.9e-34 148.3 157 58.0
TAR376G1236 Trochodendron aralioides HOM05D000442 ORTHO05D006160 6.9e-34 148.3 216 45.4
Manes.07G056400 Manihot esculenta HOM05D005311 ORTHO05D006160 9.0e-34 147.9 150 56.7
Atru.chr5.2262 Acer truncatum HOM05D005311 ORTHO05D006160 1.2e-33 147.5 149 59.1
MD05G1106900 Malus domestica HOM05D005311 ORTHO05D006160 1.2e-33 147.5 176 50.6
Nitab4.5_0000772g0050 Nicotiana tabacum HOM05D005311 ORTHO05D006160 1.5e-33 147.1 174 49.4
THA.LOC104815219 Tarenaya hassleriana HOM05D005311 ORTHO05D006160 2.0e-33 146.7 140 55.7
Actinidia02445 Actinidia chinensis HOM05D005311 ORTHO05D006160 2.6e-33 146.4 149 56.4
Actinidia28002 Actinidia chinensis HOM05D004628 ORTHO05D006160 3.4e-33 146.0 144 59.7
CSS0009611 Camellia sinensis var. sinensis HOM05D005311 ORTHO05D006160 4.5e-33 145.6 149 57.0
TWI59G0049 Tripterygium wilfordii HOM05D005311 ORTHO05D006160 4.5e-33 145.6 213 45.1
Aqoxy5G01939 Aquilegia oxysepala HOM05D005311 ORTHO05D006160 7.6e-33 144.8 227 45.4
AUR62030871 Chenopodium quinoa HOM05D005311 ORTHO05D006160 1.3e-32 144.1 208 44.7
Eucgr.I02500 Eucalyptus grandis HOM05D005311 ORTHO05D006160 1.7e-32 143.7 175 51.4
MELO3C018026.2 Cucumis melo HOM05D005311 ORTHO05D006160 6.5e-32 141.7 146 58.9
Ciclev10029272m.g Citrus clementina HOM05D005311 ORTHO05D006160 8.4e-32 141.4 209 45.9
AL1G57590 Arabidopsis lyrata HOM05D005311 ORTHO05D006160 1.1e-31 141.0 175 46.9
AUR62027028 Chenopodium quinoa HOM05D005311 ORTHO05D006160 1.1e-31 141.0 208 44.7
Nn6g32054 Nelumbo nucifera HOM05D005311 ORTHO05D006160 1.1e-31 141.0 142 57.0
FAN24G0492 Fragaria x ananassa HOM05D005311 ORTHO05D006160 1.4e-31 140.6 177 48.0
FAN27G0024 Fragaria x ananassa HOM05D005311 ORTHO05D006160 1.4e-31 140.6 177 48.0
Potri.009G084800 Populus trichocarpa HOM05D005311 ORTHO05D006160 1.4e-31 140.6 166 51.8
Sed0009957 Sechium edule HOM05D005311 ORTHO05D006160 1.4e-31 140.6 173 49.1
Duzib052G0370 Durio zibethinus HOM05D005311 ORTHO05D006160 1.9e-31 140.2 185 47.0
Hund00418 Selenicereus undatus HOM05D005311 ORTHO05D006160 1.9e-31 140.2 218 45.0
AT1G50020 Arabidopsis thaliana HOM05D005311 ORTHO05D006160 3.2e-31 139.4 173 46.8
Carub.0001s3920 Capsella rubella HOM05D005311 ORTHO05D006160 3.2e-31 139.4 142 51.4
FvH4_2g03130 Fragaria vesca HOM05D005311 ORTHO05D006160 3.2e-31 139.4 177 48.0
Sp1g36880 Schrenkiella parvula HOM05D005311 ORTHO05D006160 3.2e-31 139.4 177 47.5
CsaV3_4G000050 Cucumis sativus L. HOM05D005311 ORTHO05D006160 4.2e-31 139.0 140 59.3
Thhalv10011774m.g Eutrema salsugineum HOM05D005311 ORTHO05D006160 4.2e-31 139.0 145 51.7
FAN15G1540 Fragaria x ananassa HOM05D005311 ORTHO05D006160 4.2e-31 139.0 177 47.5
FAN20G1889 Fragaria x ananassa HOM05D005311 ORTHO05D006160 4.2e-31 139.0 177 47.5
Ah.01g024570 Amaranthus hybridus HOM05D005311 ORTHO05D006160 5.5e-31 138.7 152 55.3
arahy.Tifrunner.gnm1.ann1.QK2693 Arachis hypogaea HOM05D005311 ORTHO05D006160 7.1e-31 138.3 146 59.6
BolC3t21257H Brassica oleracea HOM05D005311 ORTHO05D006160 7.1e-31 138.3 153 49.7
CARHR040130 Cardamine hirsuta HOM05D005311 ORTHO05D006160 7.1e-31 138.3 151 51.0
Gohir.A03G180600 Gossypium hirsutum HOM05D005311 ORTHO05D006160 7.1e-31 138.3 149 54.4
Gohir.D02G203104 Gossypium hirsutum HOM05D005311 ORTHO05D006160 7.1e-31 138.3 149 54.4
Gohir.D12G019000 Gossypium hirsutum HOM05D005311 ORTHO05D006160 7.1e-31 138.3 185 45.9
Gorai.008G019300 Gossypium raimondii HOM05D005311 ORTHO05D006160 7.1e-31 138.3 185 45.9
RcHm_v2.0_Chr6g0248001 Rosa chinensis HOM05D005311 ORTHO05D006160 7.1e-31 138.3 203 44.8
BcaB07g33454 Brassica carinata HOM05D005311 ORTHO05D006160 9.3e-31 137.9 140 52.1
ClCG10G010010 Citrullus lanatus HOM05D005311 ORTHO05D006160 9.3e-31 137.9 139 59.0
Lsat_1_v5_gn_9_113920 Lactuca sativa HOM05D005311 ORTHO05D006160 9.3e-31 137.9 144 55.6
C03p89430 Brassica napus HOM05D005311 ORTHO05D006160 1.2e-30 137.5 151 49.7
BcaC08g43180 Brassica carinata HOM05D005311 ORTHO05D006160 1.6e-30 137.1 140 52.1
A08p03390 Brassica napus HOM05D005311 ORTHO05D006160 1.6e-30 137.1 148 50.7
BolC6t35609H Brassica oleracea HOM05D005311 ORTHO05D006160 1.6e-30 137.1 140 52.1
Gohir.A12G018400 Gossypium hirsutum HOM05D005311 ORTHO05D006160 1.6e-30 137.1 185 45.9
Lsat_1_v5_gn_7_84560 Lactuca sativa HOM05D005311 ORTHO05D006160 1.6e-30 137.1 150 53.3
Medtr1g105970 Medicago truncatula HOM05D005311 ORTHO05D006160 1.6e-30 137.1 149 56.4
TAR628G1269 Trochodendron aralioides HOM05D005311 ORTHO05D006160 2.1e-30 136.7 205 45.4
arahy.Tifrunner.gnm1.ann1.KVB0K0 Arachis hypogaea HOM05D005311 ORTHO05D006160 2.7e-30 136.3 175 53.7
DCAR_021939 Daucus carota HOM05D005311 ORTHO05D006160 2.7e-30 136.3 137 59.9
Gorai.005G229500 Gossypium raimondii HOM05D005311 ORTHO05D006160 2.7e-30 136.3 149 53.7
A06p03410 Brassica napus HOM05D005311 ORTHO05D006160 3.5e-30 136.0 140 51.4
HanXRQChr15g0495651 Helianthus annuus HOM05D005311 ORTHO05D006160 3.5e-30 136.0 144 56.2
ATR0767G087 Amborella trichopoda HOM05D005311 ORTHO05D006160 4.6e-30 135.6 140 57.1
BraA08t32371Z Brassica rapa HOM05D005311 ORTHO05D006160 4.6e-30 135.6 148 49.3
Ca_11020_v3 Cicer arietinum L. HOM05D005311 ORTHO05D006160 4.6e-30 135.6 159 54.1
ECA236G2995 Erigeron canadensis HOM05D000211 ORTHO05D002517 4.6e-30 135.6 140 55.0
Thecc.02G120600 Theobroma cacao HOM05D005311 ORTHO05D006160 4.6e-30 135.6 181 47.0
Lalb_Chr16g0376301 Lupinus albus HOM05D005311 ORTHO05D006160 6.0e-30 135.2 141 56.7
Phvul.007G047500 Phaseolus vulgaris HOM05D005311 ORTHO05D006160 6.0e-30 135.2 162 50.6
Potri.001G289400 Populus trichocarpa HOM05D005311 ORTHO05D006160 6.0e-30 135.2 142 57.7
VMungo0720G0066 Vigna mungo HOM05D005311 ORTHO05D006160 7.9e-30 134.8 143 55.9
C06p04800 Brassica napus HOM05D005311 ORTHO05D006160 1.8e-29 133.7 140 50.7
BraA06t23549Z Brassica rapa HOM05D005311 ORTHO05D006160 1.8e-29 133.7 203 41.4
ECA240G0703 Erigeron canadensis HOM05D005311 ORTHO05D006160 1.8e-29 133.7 149 53.7
Peaxi162Scf00016g03127 Petunia axillaris HOM05D005311 ORTHO05D006160 2.3e-29 133.3 148 52.7
Aa31LG10G4090 Aethionema arabicum HOM05D002370 ORTHO05D003878 3.0e-29 132.9 140 52.1
Glyma.10G255200 Glycine max HOM05D005311 ORTHO05D006160 3.0e-29 132.9 142 55.6
TAR625G0307 Trochodendron aralioides HOM05D005311 ORTHO05D006160 3.0e-29 132.9 173 50.3
Sabra16G0181000 Salix brachista HOM05D002370 ORTHO05D003878 3.9e-29 132.5 140 57.1
Lj9A337G44 Lonicera japonica HOM05D005311 ORTHO05D006160 8.7e-29 131.3 155 50.3
Lalb_Chr21g0307981 Lupinus albus HOM05D005311 ORTHO05D006160 1.5e-28 130.6 174 49.4
PSO447G0012 Papaver somniferum HOM05D005311 ORTHO05D006160 2.5e-28 129.8 178 48.3
Glyma.20G136100 Glycine max HOM05D005311 ORTHO05D006160 3.3e-28 129.4 138 56.5
PSO210G6612 Papaver somniferum HOM05D005311 ORTHO05D006160 4.3e-28 129.0 178 47.8
vmacro01940 Vaccinium macrocarpon HOM05D000211 ORTHO05D002517 4.3e-28 129.0 165 50.9
Lj5g0014269 Lotus japonicus HOM05D005311 ORTHO05D006160 7.4e-28 128.3 148 52.7
Lj5A221T62 Lonicera japonica HOM05D005311 ORTHO05D006160 2.8e-27 126.3 133 56.4
Lalb_Chr02g0144871 Lupinus albus HOM05D005311 ORTHO05D006160 4.8e-27 125.6 154 50.6
HanXRQChr03g0073011 Helianthus annuus HOM05D005311 ORTHO05D006160 6.9e-26 121.7 190 41.6
Prupe.8G151000 Prunus persica HOM05D005311 ORTHO05D006160 9.0e-26 121.3 149 52.3
Oeu037294.1 Olea europaea HOM05D005311 ORTHO05D006160 4.5e-25 119.0 129 53.5
BcaB04g17278 Brassica carinata HOM05D005311 ORTHO05D006160 1.0e-24 117.9 129 48.1
Cpa.g.sc106.28 Carica papaya HOM05D005311 ORTHO05D006160 3.8e-24 115.9 198 40.9
GSVIVG01009264001 Vitis vinifera HOM05D005311 ORTHO05D006160 1.9e-23 113.6 195 42.1
EL10Ac9g22172 Beta vulgaris HOM05D005311 ORTHO05D006160 7.2e-23 111.7 181 42.0
Dinv09534 Davidia involucrata HOM05D000211 ORTHO05D002517 1.2e-22 110.9 145 46.9
CDE02G2678 Ceratophyllum demersum HOM05D005427 ORTHO05D006160 2.1e-22 110.2 151 46.4
Zm00001eb201730 Zea mays HOM05D005311 ORTHO05D006160 6.1e-22 108.6 179 39.7
SMO118G0105 Selaginella moellendorffii HOM05D005311 ORTHO05D006160 1.0e-21 107.8 222 36.9
Sabra09G0065400 Salix brachista HOM05D000308 ORTHO05D002517 6.7e-21 105.1 117 57.3
Os11g0549900 Oryza sativa ssp. japonica HOM05D005311 ORTHO05D006160 2.5e-20 103.2 136 44.1
TPR.G21150 Trifolium pratense HOM05D005311 ORTHO05D006160 6.3e-19 98.6 114 55.3
Pp3c9_20640 Physcomitrium patens HOM05D005311 ORTHO05D006160 1.1e-18 97.8 144 43.1
Oeu025305.1 Olea europaea HOM05D005311 ORTHO05D006160 4.1e-18 95.9 110 54.5
Psat6g210680 Pisum sativum HOM05D005311 ORTHO05D006160 9.1e-18 94.7 128 49.2
Mapoly0159s0003 Marchantia polymorpha HOM05D005311 ORTHO05D006160 4.5e-17 92.4 198 36.4
Oeu037691.1 Olea europaea HOM05D005311 ORTHO05D006160 5.0e-16 89.0 95 56.8
CDE04G0288 Ceratophyllum demersum HOM05D005311 ORTHO05D006160 1.4e-15 87.4 68 64.7
AagrBONN_evm.TU.Sc2ySwM_340.346 Anthoceros agrestis HOM05D005311 ORTHO05D006160 1.6e-14 84.0 163 36.2
SGA_v2.0_scaffold225G43064 Striga asiatica HOM05D005311 ORTHO05D006160 6.1e-14 82.0 162 42.0
PGR142G3492 Punica granatum HOM05D005311 ORTHO05D006160 3.9e-13 79.3 172 36.6
arahy.Tifrunner.gnm1.ann1.YXS8EF Arachis hypogaea HOM05D005311 ORTHO05D006160 1.5e-12 77.4 131 46.6
Duzib132G0391 Durio zibethinus HOM05D005311 ORTHO05D006160 2.6e-12 76.6 186 34.9
Cfa004693 Carpinus fangiana HOM05D005311 ORTHO05D006160 6.9e-10 68.6 97 51.5
Haze_10287 Corylus avellana HOM05D005311 ORTHO05D006160 1.5e-09 67.4 86 54.7
CBR_g12748 Chara braunii HOM05D000019 ORTHO05D000048 1.0e-08 64.7 72 45.8
arahy.Tifrunner.gnm1.ann1.6ZTX4G Arachis hypogaea HOM05D005311 ORTHO05D006160 1.7e-08 63.9 142 38.0
CARHR113150 Cardamine hirsuta HOM05D005311 ORTHO05D006160 2.9e-08 63.2 50 64.0
CSS0025480 Camellia sinensis var. sinensis HOM05D005311 ORTHO05D006160 1.4e-07 60.8 87 48.3
Cre14.g614000 Chlamydomonas reinhardtii HOM05D005311 ORTHO05D006160 7.2e-07 58.5 76 42.1
TAR365G0893 Trochodendron aralioides HOM05D005311 ORTHO05D006160 9.4e-07 58.2 174 33.9
Dinv16067 Davidia involucrata HOM05D005311 ORTHO05D006160 1.2e-06 57.8 122 33.6
CDE02G0336 Ceratophyllum demersum HOM05D005311 ORTHO05D006160 1.6e-06 57.4 115 40.9
arahy.Tifrunner.gnm1.ann1.YSC4AN Arachis hypogaea HOM05D005311 ORTHO05D006160 4.7e-06 55.8 131 38.2


User provided reference genes

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