Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_6.g29269 Utricularia gibba HOM05D003862 ORTHO05D004398 6.8e-50 200.3 97 100.0
unitig_747.g21430 Utricularia gibba HOM05D003862 ORTHO05D004398 6.8e-50 200.3 97 100.0
SalBow2G1777 Salvia bowleyana HOM05D003862 ORTHO05D004398 1.1e-23 113.2 88 62.5
Hund04959 Selenicereus undatus HOM05D003862 ORTHO05D004398 5.5e-23 110.9 81 64.2
vmacro20157 Vaccinium macrocarpon HOM05D003862 ORTHO05D004398 1.2e-22 109.8 84 63.1
CANSAT54G2947 Cannabis sativa HOM05D003862 ORTHO05D004398 2.1e-22 109.0 94 59.6
MBI05_g22042_MAGBIO Magnolia biondii HOM05D003862 ORTHO05D004398 2.1e-22 109.0 84 61.9
Solyc10g086510.2 Solanum lycopersicum HOM05D003862 ORTHO05D004398 2.1e-22 109.0 84 63.1
Sopen10g035890 Solanum pennellii HOM05D003862 ORTHO05D004398 2.1e-22 109.0 84 63.1
CAN.G1195.10 Capsicum annuum HOM05D003862 ORTHO05D004398 2.7e-22 108.6 84 63.1
Lalb_Chr19g0137831 Lupinus albus HOM05D003862 ORTHO05D004398 2.7e-22 108.6 90 61.1
PGSC0003DMG400019201 Solanum tuberosum HOM05D003862 ORTHO05D004398 2.7e-22 108.6 84 63.1
TAR369G0814 Trochodendron aralioides HOM05D003862 ORTHO05D004398 2.7e-22 108.6 84 61.9
MD11G1108200 Malus domestica HOM05D003862 ORTHO05D004398 3.5e-22 108.2 90 62.2
HPP92_018126 Vanilla planifolia HOM05D003862 ORTHO05D004398 3.5e-22 108.2 90 61.1
HPP92_018144 Vanilla planifolia HOM05D003862 ORTHO05D004398 3.5e-22 108.2 90 61.1
CDE07G2069 Ceratophyllum demersum HOM05D003862 ORTHO05D004398 4.6e-22 107.8 90 61.1
Dinv17003 Davidia involucrata HOM05D003862 ORTHO05D004398 4.6e-22 107.8 84 61.9
Dinv42952 Davidia involucrata HOM05D003862 ORTHO05D004398 4.6e-22 107.8 84 61.9
Dinv43148 Davidia involucrata HOM05D003862 ORTHO05D004398 4.6e-22 107.8 84 61.9
Eucgr.A01265 Eucalyptus grandis HOM05D003862 ORTHO05D004398 4.6e-22 107.8 87 56.3
RcHm_v2.0_Chr5g0064531 Rosa chinensis HOM05D003862 ORTHO05D004398 4.6e-22 107.8 90 62.2
GSVIVG01024961001 Vitis vinifera HOM05D003862 ORTHO05D004398 4.6e-22 107.8 84 63.1
Ah.02g115390 Amaranthus hybridus HOM05D003862 ORTHO05D004398 6.0e-22 107.5 84 60.7
Lalb_Chr03g0026631 Lupinus albus HOM05D003862 ORTHO05D004398 6.0e-22 107.5 90 60.0
Migut.D01636 Erythranthe guttata HOM05D003862 ORTHO05D004398 7.9e-22 107.1 84 61.9
Glyma.12G063000 Glycine max HOM05D003862 ORTHO05D004398 7.9e-22 107.1 90 61.1
Nitab4.5_0000349g0310 Nicotiana tabacum HOM05D003862 ORTHO05D004398 7.9e-22 107.1 84 61.9
Nitab4.5_0001911g0090 Nicotiana tabacum HOM05D003862 ORTHO05D004398 7.9e-22 107.1 84 61.9
CSS0028919 Camellia sinensis var. sinensis HOM05D003862 ORTHO05D004398 1.0e-21 106.7 84 61.9
CSS0038231 Camellia sinensis var. sinensis HOM05D003862 ORTHO05D004398 1.0e-21 106.7 84 61.9
Migut.D00467 Erythranthe guttata HOM05D003862 ORTHO05D004398 1.0e-21 106.7 84 61.9
FvH4_3g36110 Fragaria vesca HOM05D003862 ORTHO05D004398 1.0e-21 106.7 90 60.0
FAN11G3597 Fragaria x ananassa HOM05D003862 ORTHO05D004398 1.0e-21 106.7 90 60.0
FAN16G1598 Fragaria x ananassa HOM05D003862 ORTHO05D004398 1.0e-21 106.7 90 60.0
FAN21G0907 Fragaria x ananassa HOM05D003862 ORTHO05D004398 1.0e-21 106.7 90 60.0
FAN25G1864 Fragaria x ananassa HOM05D003862 ORTHO05D004398 1.0e-21 106.7 90 60.0
Nitab4.5_0002018g0010 Nicotiana tabacum HOM05D003862 ORTHO05D004398 1.0e-21 106.7 90 58.9
Oeu014415.1 Olea europaea HOM05D003862 ORTHO05D004398 1.0e-21 106.7 84 61.9
Sc05g0009640 Simmondsia chinensis HOM05D003862 ORTHO05D004398 1.0e-21 106.7 81 61.7
unitig_21.g20465 Utricularia gibba HOM05D003164 ORTHO05D003575 1.0e-21 106.7 91 58.2
Oeu032100.1 Olea europaea HOM05D003862 ORTHO05D004398 1.3e-21 106.3 84 61.9
Peaxi162Scf00330g00415 Petunia axillaris HOM05D003862 ORTHO05D004398 1.3e-21 106.3 81 61.7
Cfa011504 Carpinus fangiana HOM05D003862 ORTHO05D004398 1.8e-21 105.9 90 60.0
DCAR_030095 Daucus carota HOM05D003862 ORTHO05D004398 1.8e-21 105.9 81 61.7
Hma1.2p1_0936F.1_g238710 Hydrangea macrophylla HOM05D003862 ORTHO05D004398 1.8e-21 105.9 84 60.7
Hma1.2p1_1513F.1_g287975 Hydrangea macrophylla HOM05D003862 ORTHO05D004398 1.8e-21 105.9 84 60.7
Lj3g0018643 Lotus japonicus HOM05D003862 ORTHO05D004398 1.8e-21 105.9 90 60.0
Cc10_g12100 Coffea canephora HOM05D003862 ORTHO05D004398 2.3e-21 105.5 84 60.7
Nitab4.5_0006455g0030 Nicotiana tabacum HOM05D003862 ORTHO05D004398 2.3e-21 105.5 90 58.9
Prupe.6G077400 Prunus persica HOM05D003862 ORTHO05D004398 2.3e-21 105.5 90 61.1
TWI36G0288 Tripterygium wilfordii HOM05D003862 ORTHO05D004398 2.3e-21 105.5 90 60.0
TAR636G2804 Trochodendron aralioides HOM05D003862 ORTHO05D004398 2.3e-21 105.5 84 60.7
AUR62038108 Chenopodium quinoa HOM05D003862 ORTHO05D004398 3.0e-21 105.1 81 61.7
Glyma.11G139400 Glycine max HOM05D003862 ORTHO05D004398 3.0e-21 105.1 90 60.0
MD12G1141800 Malus domestica HOM05D003862 ORTHO05D004398 3.0e-21 105.1 94 55.3
Medtr4g063925 Medicago truncatula HOM05D003862 ORTHO05D004398 3.0e-21 105.1 90 60.0
Os12g0571200 Oryza sativa ssp. japonica HOM05D003862 ORTHO05D004398 3.0e-21 105.1 84 59.5
PSO063G5647 Papaver somniferum HOM05D003862 ORTHO05D004398 3.0e-21 105.1 84 59.5
PSO339G2698 Papaver somniferum HOM05D003862 ORTHO05D004398 3.0e-21 105.1 84 59.5
PSO384G2795 Papaver somniferum HOM05D003862 ORTHO05D004398 3.0e-21 105.1 84 59.5
Potri.012G039100 Populus trichocarpa HOM05D003862 ORTHO05D004398 3.0e-21 105.1 81 61.7
Sabra12G0027600 Salix brachista HOM05D003862 ORTHO05D004398 3.0e-21 105.1 81 61.7
CiPaw.14G068400 Carya illinoinensis HOM05D003862 ORTHO05D004398 3.9e-21 104.8 90 58.9
FvH4_6g13690 Fragaria vesca HOM05D003862 ORTHO05D004398 3.9e-21 104.8 94 58.5
FAN02G2377 Fragaria x ananassa HOM05D003862 ORTHO05D004398 3.9e-21 104.8 94 58.5
FAN09G4075 Fragaria x ananassa HOM05D003862 ORTHO05D004398 3.9e-21 104.8 94 58.5
PGR102G0842 Punica granatum HOM05D003862 ORTHO05D004398 3.9e-21 104.8 90 58.9
Cfa017379 Carpinus fangiana HOM05D003862 ORTHO05D004398 5.1e-21 104.4 79 63.3
Haze_20791 Corylus avellana HOM05D003862 ORTHO05D004398 5.1e-21 104.4 79 63.3
SalBow5G2575 Salvia bowleyana HOM05D003862 ORTHO05D004398 5.1e-21 104.4 84 59.5
TWI75G0870 Tripterygium wilfordii HOM05D003862 ORTHO05D004398 5.1e-21 104.4 90 58.9
GSVIVG01034172001 Vitis vinifera HOM05D003862 ORTHO05D004398 5.1e-21 104.4 90 61.1
EL10Ac5g11591 Beta vulgaris HOM05D003862 ORTHO05D004398 6.7e-21 104.0 81 60.5
Ca_19161_v3 Cicer arietinum L. HOM05D003862 ORTHO05D004398 6.7e-21 104.0 90 60.0
Lsat_1_v5_gn_4_177081 Lactuca sativa HOM05D003862 ORTHO05D004398 6.7e-21 104.0 84 59.5
Lsat_1_v5_gn_5_170681 Lactuca sativa HOM05D003862 ORTHO05D004398 6.7e-21 104.0 84 59.5
Pp3c24_15930 Physcomitrium patens HOM05D003862 ORTHO05D004398 6.7e-21 104.0 82 61.0
TWI31G1113 Tripterygium wilfordii HOM05D003862 ORTHO05D004398 6.7e-21 104.0 86 60.5
Prupe.6G255300 Prunus persica HOM05D003862 ORTHO05D004398 8.7e-21 103.6 94 55.3
PGR119G1270 Punica granatum HOM05D003862 ORTHO05D004398 8.7e-21 103.6 90 58.9
Hund10643 Selenicereus undatus HOM05D003862 ORTHO05D004398 8.7e-21 103.6 84 58.3
THA.LOC104799442 Tarenaya hassleriana HOM05D003862 ORTHO05D004398 8.7e-21 103.6 82 59.8
AUR62025808 Chenopodium quinoa HOM05D003862 ORTHO05D004398 1.1e-20 103.2 81 60.5
AL5G25420 Arabidopsis lyrata HOM05D003862 ORTHO05D004398 1.5e-20 102.8 84 60.7
AT3G46560 Arabidopsis thaliana HOM05D003862 ORTHO05D004398 1.5e-20 102.8 84 59.5
arahy.Tifrunner.gnm1.ann1.817FQF Arachis hypogaea HOM05D003862 ORTHO05D004398 1.5e-20 102.8 85 55.3
arahy.Tifrunner.gnm1.ann1.JG2TRE Arachis hypogaea HOM05D003862 ORTHO05D004398 1.5e-20 102.8 85 55.3
arahy.Tifrunner.gnm1.ann1.Q4VW5J Arachis hypogaea HOM05D003862 ORTHO05D004398 1.5e-20 102.8 84 57.1
CiPaw.09G192600 Carya illinoinensis HOM05D003862 ORTHO05D004398 1.5e-20 102.8 84 59.5
TPR.G14480 Trifolium pratense HOM05D003862 ORTHO05D004398 1.5e-20 102.8 90 61.1
PGR004G0102 Punica granatum HOM05D003862 ORTHO05D004398 1.9e-20 102.4 83 57.8
Sed0018689 Sechium edule HOM05D003862 ORTHO05D004398 1.9e-20 102.4 79 62.0
arahy.Tifrunner.gnm1.ann1.PAA8CG Arachis hypogaea HOM05D003862 ORTHO05D004398 2.5e-20 102.1 80 58.8
Carub.0005s1283 Capsella rubella HOM05D003862 ORTHO05D004398 2.5e-20 102.1 84 59.5
MELO3C009258.2 Cucumis melo HOM05D003862 ORTHO05D004398 2.5e-20 102.1 79 60.8
CsaV3_3G034900 Cucumis sativus L. HOM05D003862 ORTHO05D004398 2.5e-20 102.1 79 60.8
Mapoly0020s0168 Marchantia polymorpha HOM05D003862 ORTHO05D004398 2.5e-20 102.1 79 59.5
Phvul.011G064100 Phaseolus vulgaris HOM05D003862 ORTHO05D004398 2.5e-20 102.1 85 60.0
RcHm_v2.0_Chr3g0466561 Rosa chinensis HOM05D003862 ORTHO05D004398 2.5e-20 102.1 95 56.8
unitig_744.g24379 Utricularia gibba HOM05D003862 ORTHO05D004398 2.5e-20 102.1 84 57.1
BcaC02g10413 Brassica carinata HOM05D003862 ORTHO05D004398 3.3e-20 101.7 84 57.1
A03p68180 Brassica napus HOM05D003862 ORTHO05D004398 3.3e-20 101.7 84 57.1
C04p29160 Brassica napus HOM05D003862 ORTHO05D004398 3.3e-20 101.7 84 57.1
BolC4t24450H Brassica oleracea HOM05D003862 ORTHO05D004398 3.3e-20 101.7 84 57.1
BraA01t02647Z Brassica rapa HOM05D003862 ORTHO05D004398 3.3e-20 101.7 84 57.1
ClCG10G021140 Citrullus lanatus HOM05D003862 ORTHO05D004398 3.3e-20 101.7 79 60.8
HanXRQChr05g0136091 Helianthus annuus HOM05D003862 ORTHO05D004398 3.3e-20 101.7 90 56.7
Pp3c20_6200 Physcomitrium patens HOM05D003862 ORTHO05D004398 3.3e-20 101.7 83 59.0
THA.LOC104810779 Tarenaya hassleriana HOM05D003862 ORTHO05D004398 3.3e-20 101.7 82 58.5
Manes.02G133100 Manihot esculenta HOM05D003862 ORTHO05D004398 4.3e-20 101.3 79 59.5
Sed0022625 Sechium edule HOM05D003862 ORTHO05D004398 4.3e-20 101.3 79 62.0
AagrBONN_evm.TU.Sc2ySwM_368.1516 Anthoceros agrestis HOM05D003862 ORTHO05D004398 5.6e-20 100.9 82 57.3
arahy.Tifrunner.gnm1.ann1.GD7L84 Arachis hypogaea HOM05D003862 ORTHO05D004398 5.6e-20 100.9 85 54.1
Ciclev10029679m.g Citrus clementina HOM05D003862 ORTHO05D004398 5.6e-20 100.9 79 60.8
Thhalv10023780m.g Eutrema salsugineum HOM05D003862 ORTHO05D004398 5.6e-20 100.9 84 57.1
Gohir.D03G125700 Gossypium hirsutum HOM05D003862 ORTHO05D004398 5.6e-20 100.9 86 58.1
Gorai.003G131900 Gossypium raimondii HOM05D003862 ORTHO05D004398 5.6e-20 100.9 86 58.1
MD04G1129100 Malus domestica HOM05D003862 ORTHO05D004398 5.6e-20 100.9 88 54.5
ECA248G1530 Erigeron canadensis HOM05D003862 ORTHO05D004398 7.4e-20 100.5 87 56.3
Thhalv10002743m.g Eutrema salsugineum HOM05D003862 ORTHO05D004398 7.4e-20 100.5 84 57.1
Sp2g01740 Schrenkiella parvula HOM05D003862 ORTHO05D004398 7.4e-20 100.5 84 57.1
Duzib168G1372 Durio zibethinus HOM05D003862 ORTHO05D004398 9.6e-20 100.1 86 58.1
Duzib170G0179 Durio zibethinus HOM05D003862 ORTHO05D004398 9.6e-20 100.1 86 58.1
Phvul.L001624 Phaseolus vulgaris HOM05D003862 ORTHO05D004398 9.6e-20 100.1 79 55.7
Actinidia05313 Actinidia chinensis HOM05D003862 ORTHO05D004398 1.3e-19 99.8 84 58.3
arahy.Tifrunner.gnm1.ann1.L1N949 Arachis hypogaea HOM05D003862 ORTHO05D004398 1.3e-19 99.8 85 52.9
BcaC04g22454 Brassica carinata HOM05D003862 ORTHO05D004398 1.3e-19 99.8 84 57.1
A09p15900 Brassica napus HOM05D003862 ORTHO05D004398 1.3e-19 99.8 84 57.1
C09p19140 Brassica napus HOM05D003862 ORTHO05D004398 1.3e-19 99.8 84 57.1
BolC9t54821H Brassica oleracea HOM05D003862 ORTHO05D004398 1.3e-19 99.8 84 57.1
BraA09t37226Z Brassica rapa HOM05D003862 ORTHO05D004398 1.3e-19 99.8 84 57.1
Lj3g0015625 Lotus japonicus HOM05D003862 ORTHO05D004398 1.3e-19 99.8 78 55.1
Manes.01G173900 Manihot esculenta HOM05D003862 ORTHO05D004398 1.3e-19 99.8 79 58.2
Thecc.09G321500 Theobroma cacao HOM05D003862 ORTHO05D004398 1.3e-19 99.8 86 58.1
Gohir.A03G042066 Gossypium hirsutum HOM05D003862 ORTHO05D004398 1.6e-19 99.4 86 57.0
SMO367G0781 Selaginella moellendorffii HOM05D003862 ORTHO05D004398 2.1e-19 99.0 78 59.0
Cfa016018 Carpinus fangiana HOM05D000273 ORTHO05D004398 2.8e-19 98.6 90 58.9
Peaxi162Scf01517g00013 Petunia axillaris HOM05D003862 ORTHO05D004398 2.8e-19 98.6 87 54.0
TPR.G17728 Trifolium pratense HOM05D003862 ORTHO05D004398 2.8e-19 98.6 90 60.0
TPR.G5603 Trifolium pratense HOM05D003862 ORTHO05D004398 2.8e-19 98.6 81 54.3
Aa31sc23G440 Aethionema arabicum HOM05D003862 ORTHO05D004398 3.7e-19 98.2 80 56.2
Cpa.g.sc81.150 Carica papaya HOM05D003862 ORTHO05D004398 4.8e-19 97.8 86 57.0
Duzib150G0578 Durio zibethinus HOM05D003862 ORTHO05D004398 4.8e-19 97.8 86 57.0
Glyma.03G082300 Glycine max HOM05D003862 ORTHO05D004398 6.2e-19 97.4 79 53.2
COL.COLO4_18508 Corchorus olitorius HOM05D003862 ORTHO05D004398 8.2e-19 97.1 86 55.8
HanXRQChr01g0009491 Helianthus annuus HOM05D003862 ORTHO05D004398 8.2e-19 97.1 84 52.4
BcaB07g31364 Brassica carinata HOM05D003862 ORTHO05D004398 1.1e-18 96.7 84 54.8
MD03G1093400 Malus domestica HOM05D003862 ORTHO05D004398 1.1e-18 96.7 78 61.5
CARHR155240 Cardamine hirsuta HOM05D003862 ORTHO05D004398 1.4e-18 96.3 80 56.2
Aa31LG4G15560 Aethionema arabicum HOM05D003862 ORTHO05D004398 2.4e-18 95.5 80 55.0
Carub.0003s2691 Capsella rubella HOM05D003862 ORTHO05D004398 3.1e-18 95.1 80 57.5
CBR_g46834 Chara braunii HOM05D003862 ORTHO05D004398 3.1e-18 95.1 81 55.6
Gohir.D13G233100 Gossypium hirsutum HOM05D003862 ORTHO05D004398 3.1e-18 95.1 85 55.3
Gorai.013G263900 Gossypium raimondii HOM05D003862 ORTHO05D004398 3.1e-18 95.1 85 55.3
Gohir.A13G227500 Gossypium hirsutum HOM05D003862 ORTHO05D004398 4.0e-18 94.7 78 56.4
Rhsim05G0192800 Rhododendron simsii HOM05D003862 ORTHO05D004398 4.0e-18 94.7 107 48.6
ATR0559G041 Amborella trichopoda HOM05D003862 ORTHO05D004398 6.9e-18 94.0 78 56.4
Aqoxy4G02928 Aquilegia oxysepala HOM05D003862 ORTHO05D004398 9.0e-18 93.6 79 53.2
VMungo1127G0240 Vigna mungo HOM05D003862 ORTHO05D004398 3.4e-17 91.7 78 56.4
MCO12G250 Micromonas commoda HOM05D003862 ORTHO05D004398 5.8e-17 90.9 82 50.0
Psat7g239120 Pisum sativum HOM05D003862 ORTHO05D004398 5.8e-17 90.9 81 49.4
Actinidia11257 Actinidia chinensis HOM05D003862 ORTHO05D004398 2.2e-16 89.0 69 63.8
QL01p031927 Quercus lobata HOM05D003862 ORTHO05D004398 2.5e-15 85.5 88 53.4
FAN27G3302 Fragaria x ananassa HOM05D003862 ORTHO05D004398 3.2e-15 85.1 85 54.1
Nn2g14532 Nelumbo nucifera HOM05D003862 ORTHO05D004398 1.2e-14 83.2 68 61.8
Haze_24096 Corylus avellana HOM05D003862 ORTHO05D004398 2.1e-14 82.4 62 66.1
Sc20g0004910 Simmondsia chinensis HOM05D003862 ORTHO05D004398 4.6e-14 81.3 56 66.1
QL07p048307 Quercus lobata HOM05D003862 ORTHO05D004398 7.9e-14 80.5 55 67.3
vmacro08654 Vaccinium macrocarpon HOM05D003862 ORTHO05D004398 1.0e-13 80.1 56 64.3
Solyc08g048070.1 Solanum lycopersicum HOM05D003862 ORTHO05D004398 1.3e-13 79.7 67 56.7
Os05g0111100 Oryza sativa ssp. japonica HOM05D003862 ORTHO05D004398 3.0e-13 78.6 86 41.9
CAN.G326.7 Capsicum annuum HOM05D003862 ORTHO05D004398 3.9e-13 78.2 62 61.3
Dinv37171 Davidia involucrata HOM05D003862 ORTHO05D004398 3.9e-13 78.2 55 65.5
PRCOL_00005138 Prasinoderma coloniale HOM05D003862 ORTHO05D004398 4.3e-12 74.7 82 42.7
Peaxi162Scf00165g00129 Petunia axillaris HOM05D003862 ORTHO05D004398 2.8e-11 72.0 78 51.3
FAN14G4115 Fragaria x ananassa HOM05D003862 ORTHO05D004398 8.2e-11 70.5 94 46.8
Cre01.g033400 Chlamydomonas reinhardtii HOM05D003862 ORTHO05D004398 1.4e-10 69.7 65 49.2
MBI14_g20103_MAGBIO Magnolia biondii HOM05D003862 ORTHO05D004398 9.0e-10 67.0 84 46.4
Medtr4g021715 Medicago truncatula HOM05D003862 ORTHO05D004398 3.8e-08 61.6 81 39.5


User provided reference genes

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